Basic Information

Insect: Heteropelma amictum
Gene Symbol: RREB1
Assembly: GCA_959613375.1
Location: OY390722.1:7952567-7965142[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00049 0.044 14.4 0.0 1 23 51 73 51 73 0.98

2 16 0.00017 0.015 15.8 0.3 1 23 87 109 87 109 0.98

3 16 2.3e-07 2.1e-05 24.8 1.3 1 23 115 138 115 138 0.98

4 16 0.027 2.4 8.9 0.4 1 23 242 265 242 266 0.93

5 16 3.6 3.2e+02 2.2 2.8 2 23 272 294 272 294 0.91

6 16 1.5 1.3e+02 3.4 0.3 1 19 352 370 352 372 0.89

7 16 0.0067 0.6 10.8 0.1 1 23 491 513 491 513 0.97

8 16 5.8e-05 0.0052 17.3 0.3 1 23 522 544 522 544 0.98

9 16 0.0051 0.46 11.2 3.1 1 23 550 573 550 573 0.97

10 16 0.00046 0.041 14.4 3.0 1 23 1017 1040 1017 1040 0.97

11 16 0.00066 0.059 14.0 0.1 3 23 1347 1367 1345 1367 0.97

12 16 0.92 82 4.1 6.5 1 23 1373 1396 1373 1396 0.97

13 16 0.019 1.7 9.4 1.8 1 23 1459 1483 1459 1483 0.95

14 16 0.88 79 4.1 2.3 1 23 1631 1654 1631 1654 0.96

15 16 0.0017 0.15 12.7 0.2 2 23 1709 1730 1708 1730 0.96

16 16 1.3 1.2e+02 3.6 8.2 1 23 1736 1758 1736 1758 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00049	0.044	14.4	0.0	1	23	51	73	51	73	0.98
2	16	0.00017	0.015	15.8	0.3	1	23	87	109	87	109	0.98
3	16	2.3e-07	2.1e-05	24.8	1.3	1	23	115	138	115	138	0.98
4	16	0.027	2.4	8.9	0.4	1	23	242	265	242	266	0.93
5	16	3.6	3.2e+02	2.2	2.8	2	23	272	294	272	294	0.91
6	16	1.5	1.3e+02	3.4	0.3	1	19	352	370	352	372	0.89
7	16	0.0067	0.6	10.8	0.1	1	23	491	513	491	513	0.97
8	16	5.8e-05	0.0052	17.3	0.3	1	23	522	544	522	544	0.98
9	16	0.0051	0.46	11.2	3.1	1	23	550	573	550	573	0.97
10	16	0.00046	0.041	14.4	3.0	1	23	1017	1040	1017	1040	0.97
11	16	0.00066	0.059	14.0	0.1	3	23	1347	1367	1345	1367	0.97
12	16	0.92	82	4.1	6.5	1	23	1373	1396	1373	1396	0.97
13	16	0.019	1.7	9.4	1.8	1	23	1459	1483	1459	1483	0.95
14	16	0.88	79	4.1	2.3	1	23	1631	1654	1631	1654	0.96
15	16	0.0017	0.15	12.7	0.2	2	23	1709	1730	1708	1730	0.96
16	16	1.3	1.2e+02	3.6	8.2	1	23	1736	1758	1736	1758	0.98

Sequence Information

Coding Sequence: ATGGAGTACACGACGAAAGACTCTTCGGCGCCATGTCGTCTCGACGCTATAGCGGAGAGCGGTATAGGGGGTGGCTTTTTGCTCCGGCGCCGTTGGTTCGTAGAGGCTATCGAGAGTCTGAGGACTTTGGACCAACAGGAGACCGCAGCTTATCCCTGCCCGGCCTGTCCAACCGTGTTAACGACATCCAGAGACCTGACGAATCATTTAAGGGGTCACAATTCACCTCGTAGTACAGATTACAGCGGCGAGGACGATTATTCCTGCGGTGTTTGCCACAAAGTTCTGAGCTCGGCGAGTTCTCTGGATCGTCACGTTCTCGTACACTCGGGCGAACGACCATTCAAGTGTAAATACTGCGACATGGCATTCACGACGAATGGCAACATGAACAGACATCTGAGAACAGCGCACGGTTCGTCACCGCGCGAGACCAACGGCTACACGGACTCGGAGGGTAGCAGCGATTCGGAAAAGTCAGGAACGAAGCGTCGCCATCGTCACGGAATCGAGCAAGAATACAACAACAACGAAATCGGTAAGAGTGGTTCGGCCGATTTGATAAATCAATTGGAATCACCCTCGAGGTACGTAGCCAAGAGAAAACGCGCCGATTTCACCGACGACAGCGATAATCCAACGAGAAAACACAAGATCTTGTTGGGCAATTCGAGAAGCGAACTGCAAAAtggcgaaatgaaaaacgagcTGCGTACGATAATTCACAATTGCCCGGTATGCGGGAGATTGGATTTCCCGACCAGCGCCCTTCTCGAGGCGCACCTCGAGCGCCACCACCCGGAATTCCCGGCAAAGTGCGAGCCTTGCAATCTCTCCTTCAAGAACCATCGGGTTCTCAATCTTCACAAATACATGAAACACATggatgatgaaaattcatcgatcgacAACAACGGCCGCAATTTGCGCAATTCGGTCGTTGGCTTCAACGATTTGACGTTCGTTGACTTTTCGTCCGGCAAGTTTCCGGCGATCGCGCGCGCCGTCTGCGAGCAATCGCTTCATCGTCCCGCATCCGGAGAGATGACCAAGTTTCAATGCGACAAGTGTCTCCGAGCTTTTCCATGCCGATCGGCTCTAGACGCGCATGAAATCGATTGCGGCACGATCGTGCAGACTTCCGGCTGTTGCATGGACGATCGTTCTTCGAggagagacgattttttcgccgGCCTGGATCTGCAGAACAGAGCCGCGCTCAACGAGGCAAAAGAGGGCAAGGACCTTGCCGATATACAAAGCATAATATCGGTCACTTCCGGTCCGATCTTGCAAAATTTTCCTCGCTCGGACGCGAGCACACCGGAACACCACCAGATAAGGTCGAATCCGAACAACGCCGGTTCGTCAGGCTCTTCCGGTACGCCATCGTCAACGGATTATCACCAGGAGGAAGAGGCTCAGGATGCCTTTGCCGCTGAATTTCGTCGGATGAAGCTAAAGGGTGAATTCCCGTGTCGTTTGTGCGACGCGGTGTTTCCAAATTTACGCGCCCTCAAAGGGCACAATCGGTCGCACATGGGGGTCGGTCCCGGCATGCCTTATCCGTGCAACATGTGTCCTTACACGAGCAACGACAAGGGTACGCTGGTCAGACACTTGCGATCGCACAACGGCGATCGTCCGTTCGAGTGTTCCCTGTGTAATTTCGCATTCACGACCAAGGCCAACTGCGAGAGGCACGTGAGAAATCGTCACggaaaagtttctcgagaGGAGATCAAAAGCGTCATCATTTATCATCCGAGCGAGGACAGCACCAACGATTCCGGCTCGCTGGACAGGACGGACTCGCGTCGCGAGGACGCCCGGAAGTCTCTCGTTTATCCACCCTCCGCGAGCAGCGAAAAGGACGACAATTCACAGCGGCGAAGAGACTTTTATCTGGGTATACAATTCGGCGGTAAACAGGCTCCCGGGAGCAGCGCCATCTCCGAGGAAACATCACCGTTGTCTCTGCAATCTCTGCATTACGAAAAATCCGAGACGTTCGGCAGAACGGCAGGCGCTCGCGGGAATTACCCGCGCGAATCCAACCGGAGGATCATGGACGACGAGggagacgaggaggaggacgatTACGATGATTACGATTACGAGGACAACGACAATGATTACAAGTCGGAGAACAGCGTGAAGCTCGGTTACAACCTTAATTCAAGATCATCGGAGGATGACGGAACGGTTTCTCTAGTCAACGATACCAAAACGACCGTACACCAAAGAGTTCAAGCTAGTCCGATAGACTTGAAGAAGAGTACGAGAGCCGTGACGGCGATAGCGACGGAAGCGAGCGTTAACGGCGATACCGGAGAAGCTTCCGCCTTCGTTACCGGTGAAGACGCCCCGCTCGATCTTTCGATGGACGTTCTCGATCTTAGCAAAAAATCAACCGGTAACAACGGGCCAAGCACTGCCGAAAGTTCGCCGTCTTCACCGGCGACGACAGCCTCGATTCCGAACACGGAGGGTGAATTCGGCCGGAGTCACAAGGAGTTTTACGACGCGActaatcaatttttattgacaCAGGCCTTGCTGAAGGCCGGACAAGCTGGCAATCCCGCGACATCGTTGGAAGCCCTCTACGCCAATGCCCACATGATATATCGCAATTTCGGTGGTTTCTCAGCTGCCGGTGTGGGCGCCGGTATTTTACCCCCTTATCTCTTCAATCCCCACATGTTTGGACAGGATTTTGCTATAAAGGATCGCCTCCAGAAAGAGCTCGTGAGGGGATTGCAGCTGACGAGCGGCGGTAACCTCGTCGAGCCGCCCGTTGGCAACACCGCGTTCGCCGGGGCTTATCCCCCGAGCAGGGACGTGACGGTAGCCCGCTCCGAGCAACAAAACGATTACAGCAATAAGGCGGTCAATGCGAAAATACCGTCGAAGATTGCGACGAGCGCTTCGATGAGAGAGCCCAAGATCGATAACGCTCAATCGGCAAATTCCGTCAAAATGGTCATAAAGAACGGTGTACTGATGCCAAAGCAAAAACAACGAAGATACAGAACCGAGAGACCGTTTACGTGCGAGCATTGCTCCGCGAGATTCACTCTCCGCAGCAATATGGAGAGGCACATAAAACAGCAGCATCCGCAACACTGGAGCCAAAGACCACGCGGTGGTCATTCCACGAGAGGAAGACCACCCGCGAATCCAGCCAGTCTCGTATCCCCCGGCGGCAATCATTCCACCAATCATCAAAGTTCGCAGCAAACCAGTTCGAACGCCTTGCCGAAAATCGGTGGATCAAGCGGATCAttgaattacgaaaaacactCGATATCCGATCACGTCAAGTACGCGATTCTTGCCCAGCAGCTCAAGGGCAATAAAATCGAAGAGAACGACACGGAAGAGGAATTGATCATCGACGAGAGTGCTCATGATAACAAGGGAATCCACGAGAACGAGGCTCTCCCGCAAACGACGAGTCTCCTCAGAGGCAAACTCGAGGGTATGAATTTGTACAGGGAAAACTTGAGAGCCCAGCAGCATCAGCAAAGAACGTCGGAAATCGGTAAGTGGGCGAAAGACGACGAGGAACCGAGGCGAGAAGATCCAGCGACTCTGGAAGCGACGGAGGTCGGAGATTATTGCAGAGTCGACGTCAAGATCGAACCGAATGACTACGAGGATGGACAGGCCGAGGAAAGAGACGATCGCTATTCAGCGATTCAAGGGAGCTTCGCTGAAGTGACAAAAGTCGAACAATCGACTTCCCGCGATGACtcgacgagcgagagaaacgaggatCTCGCCAGTGTGTCGGAATTATTGGACAATGCGTCGCAGCAGTACCAACAATTTCAACCGCAGTACATGAGCGACGAGGAGGGCTTGGTCGCGTCAACGAGCGACTGCAACAATTCCGggagcgatgaaaaatccgATTCCGTAAATTCGGTGAATTCGCTAAACTCGCAAACGTCGTccaagagaaagaagaagaaaaagaagaagatgaagaagaagaaatcgGCTTATTCAATGGCGCCAAACAGAGTCATATGCCCGTACTGCGAGAGGCCTTTCCCTTGGACATCGTCCCTCAGAAGACACATACTCACCCATACAGGACAAAAGCCATATCAGTGTATGCACTGCTCGCTCCTCTTCACCACAAAGTCCAACTGCGATCGCCATCTGTTGAGAAAGCATAAAAACAACGCCAACAAGATACGACGAATGCGAAACTCTTCGTCGCCGGAAGCTCACGAGCAATCCTGCAATAATAACAACACAaacagcaacaacaataaCATCACCAGCAGCAACAATAACACGAGCAACAACGCCAATGGTCCCAGCAGCGCATTCACCATGAGAAACGTTCCCGAAAGACCGTACAAGTGTAATCTATGCCCAAGCTCAACTTTCTCAACCCTGGGCAATTTGAAGAAGCACAAATCCTCCAAGCACTCGCAGGACGCTGATTTGAAATCCAGAGCGGAATCGCCGGTGACGAGCGAGCCCCGAAACAGCCCGATAACAACGTGCAACAAGCAAAACGATAACAGCGGCTACGAGAGCCAGTCGTCCAGCGTTTCGGAAAACATGGACAACGCGGATGGAGAAAATCGCGAAAGTCTCAAGTCGACGGTTCCTTTGAACGTCGACGAGACGACGGTCGACGCCGAGATAACCGGAAGCAATTCGATGACTGCGACTGAAACTTCGGAAATTCTCGCGAAAGGTGCAGCGGTTGTTCAGGAGAATACAGATTGCCCGGATGTTCCGGAGAACACAATGTCTCCGGATAACGCGATGCAAAAAAATCCGGAAAACGGTATGCCGACGAACGAATTGGCAAAATCGCGGAGACTCTCGCCGAGATCGTCGCCGGGACCGACCGACGCTCCCTTCAAGTGTCATCTCTGCGACAGCGGATTTGCCGAACGTCAGGACTGCCTCGAACACATAAGAATCAATCACACGAGATCGTACGAGGTGCTCGTTGCCAAGGGCGCACTCGACATGGATATCGAGACACCGGAGGAGCAACAGCAACCACCGCCGAATTCGTTGTTGCAGCCACACACGAGCgacggagaggaaaaacgcgGCCGATTTCCAGACTACAGTAATAGAAAGGTTGTCTGCGCATTTTGCGTGCGTCGTTTTTGGTCAGCCGAGGATCTCCGTCGCCACATGAGAACGCACACGGGTGAAAGGCCGTTCTCCTGCGACATATGCTGTCGTCGTTTTACCCTGAAGCACAGTATGCTTCGTCATCGCAAGAAGCACGAGTCCGTTGACTCGATGATGTACGTCGGTACGAGCGGTGACGAGGAATCGGCTCCTTCGCAACCACCGACGATAACACCTCGGAGCCAGCAGCAACAGCACAGCTCGATGATCGTCAATACAACGAGCTGCGACTCGAGGCTGCAGGAAAGAGTGTCCCTTCCGACGGTCGCGTCCGTCGCGACCGGCGACGCTGCGCCCAGCGGTCTCATGAGGTTCAATCcttatgaaaaattgactaCACTCACTGGCAAAATGGCCAACGCCCAGCAAAACACCACGGAATATCCAGTTGACACGGAAAACGATCTCATCTCGAATCTTCTTGGCATTCGTGACAAGAGCATCATCGATAAGATGCTACAAGCATCAGCCGATGACGCTGCCAAGCTTCTCGGTGTAAACAGACATCACGATTGA
Protein Sequence: MEYTTKDSSAPCRLDAIAESGIGGGFLLRRRWFVEAIESLRTLDQQETAAYPCPACPTVLTTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGSSPRETNGYTDSEGSSDSEKSGTKRRHRHGIEQEYNNNEIGKSGSADLINQLESPSRYVAKRKRADFTDDSDNPTRKHKILLGNSRSELQNGEMKNELRTIIHNCPVCGRLDFPTSALLEAHLERHHPEFPAKCEPCNLSFKNHRVLNLHKYMKHMDDENSSIDNNGRNLRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEMTKFQCDKCLRAFPCRSALDAHEIDCGTIVQTSGCCMDDRSSRRDDFFAGLDLQNRAALNEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHHQIRSNPNNAGSSGSSGTPSSTDYHQEEEAQDAFAAEFRRMKLKGEFPCRLCDAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSLCNFAFTTKANCERHVRNRHGKVSREEIKSVIIYHPSEDSTNDSGSLDRTDSRREDARKSLVYPPSASSEKDDNSQRRRDFYLGIQFGGKQAPGSSAISEETSPLSLQSLHYEKSETFGRTAGARGNYPRESNRRIMDDEGDEEEDDYDDYDYEDNDNDYKSENSVKLGYNLNSRSSEDDGTVSLVNDTKTTVHQRVQASPIDLKKSTRAVTAIATEASVNGDTGEASAFVTGEDAPLDLSMDVLDLSKKSTGNNGPSTAESSPSSPATTASIPNTEGEFGRSHKEFYDATNQFLLTQALLKAGQAGNPATSLEALYANAHMIYRNFGGFSAAGVGAGILPPYLFNPHMFGQDFAIKDRLQKELVRGLQLTSGGNLVEPPVGNTAFAGAYPPSRDVTVARSEQQNDYSNKAVNAKIPSKIATSASMREPKIDNAQSANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPASLVSPGGNHSTNHQSSQQTSSNALPKIGGSSGSLNYEKHSISDHVKYAILAQQLKGNKIEENDTEEELIIDESAHDNKGIHENEALPQTTSLLRGKLEGMNLYRENLRAQQHQQRTSEIGKWAKDDEEPRREDPATLEATEVGDYCRVDVKIEPNDYEDGQAEERDDRYSAIQGSFAEVTKVEQSTSRDDSTSERNEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSVNSLNSQTSSKRKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAHEQSCNNNNTNSNNNNITSSNNNTSNNANGPSSAFTMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSQDADLKSRAESPVTSEPRNSPITTCNKQNDNSGYESQSSSVSENMDNADGENRESLKSTVPLNVDETTVDAEITGSNSMTATETSEILAKGAAVVQENTDCPDVPENTMSPDNAMQKNPENGMPTNELAKSRRLSPRSSPGPTDAPFKCHLCDSGFAERQDCLEHIRINHTRSYEVLVAKGALDMDIETPEEQQQPPPNSLLQPHTSDGEEKRGRFPDYSNRKVVCAFCVRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRSQQQQHSSMIVNTTSCDSRLQERVSLPTVASVATGDAAPSGLMRFNPYEKLTTLTGKMANAQQNTTEYPVDTENDLISNLLGIRDKSIIDKMLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -