Basic Information

Insect: Heteropelma amictum
Gene Symbol: -
Assembly: GCA_959613375.1
Location: OY390724.1:10554062-10556474[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00028 0.025 15.1 1.4 1 23 334 356 334 356 0.98

2 11 1e-05 0.00093 19.6 1.7 1 23 361 383 361 383 0.96

3 11 6.4e-06 0.00058 20.3 0.6 1 23 437 459 437 459 0.97

4 11 0.014 1.3 9.8 1.0 1 23 464 486 464 486 0.97

5 11 0.0002 0.018 15.6 3.3 1 23 537 559 537 559 0.98

6 11 0.0067 0.6 10.8 1.2 2 23 567 588 566 588 0.97

7 11 9.4e-07 8.4e-05 22.9 2.1 1 23 599 621 599 621 0.96

8 11 5.9e-05 0.0053 17.3 1.0 1 23 627 649 627 649 0.98

9 11 0.00022 0.019 15.5 0.6 1 23 655 677 655 677 0.98

10 11 4.5e-06 0.0004 20.8 2.0 1 23 683 705 683 705 0.96

11 11 8.1e-05 0.0072 16.8 0.3 1 22 711 732 711 732 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00028	0.025	15.1	1.4	1	23	334	356	334	356	0.98
2	11	1e-05	0.00093	19.6	1.7	1	23	361	383	361	383	0.96
3	11	6.4e-06	0.00058	20.3	0.6	1	23	437	459	437	459	0.97
4	11	0.014	1.3	9.8	1.0	1	23	464	486	464	486	0.97
5	11	0.0002	0.018	15.6	3.3	1	23	537	559	537	559	0.98
6	11	0.0067	0.6	10.8	1.2	2	23	567	588	566	588	0.97
7	11	9.4e-07	8.4e-05	22.9	2.1	1	23	599	621	599	621	0.96
8	11	5.9e-05	0.0053	17.3	1.0	1	23	627	649	627	649	0.98
9	11	0.00022	0.019	15.5	0.6	1	23	655	677	655	677	0.98
10	11	4.5e-06	0.0004	20.8	2.0	1	23	683	705	683	705	0.96
11	11	8.1e-05	0.0072	16.8	0.3	1	22	711	732	711	732	0.96

Sequence Information

Coding Sequence: ATGGCCATGAACACGAGTTACTTCGATCAGACGCTCAACATAGACAGAATTTGTCGAATATGTCTGCTGGAGGGTGCCAATCTTTCGCCCATATTCTGCAACAAACAGGAAGTCAATGAATTTTCAGGCCTGCAACAAAAGATTCAATTATGCGGCTCTATTGAGATCCATGAAAATGATGGTTTTCCATCGTTGATTTGCGACGTTTGTATCTACAAAGCTAGCATAGCTCATGAATTTCGTCAGCAGTGTCAGCAGTCCGACGCCCGTCTCAGATTGCTGTACGACAAGACCAACGAAGCGAACATCGTGGAATTTTATCGAGAATCTTGTTCACAGGACGAGCCCCAAACCCGTATAATATTTACGAGAAAGATGCCGAATCAATCGGATGGATATTACGTCAAAGATGAGCTGCAAGAGAATTCGCAGAACACACAAGAGTATACGACTGCTATCGGCGGTTATACAGACGCGAATGTTCGTACGGTGAacggaaacgaaaattcgataagtTGCCAGCAGGAAAAGCTTTTTCTCTGTAATATCGCGAGTTTTGAGGAAACGAAGGAAATAACGAAACAGGAAGGTACGATATTGGCGGTCGAAGCGTCACATCAGGTTGATTTGCCGATCGTACAGACGGAAATAACAACGACGTTAATGACGGTCAATGCTGATGGGGAATTGGAGACGCGACAATTAATCGTTAAAGACAGTGATGATAAATGCAACGAGACGGCAATCGAGGAGGAATACTTGAACGAACACATGTTGAGTGAAAGCGTCATGGAGGATTCCATAGAAGTCGATAACTCGGATTTTCCCGAAGCGGAGGATAAAGAATTGTTGAGACAGGATGAGGAAGATGGAACAATGGCAAAGTGCGGAAACTCGTCGAAAAACGCGTCGAAATCGTACGGTGAAAACGAAATTGAAGACGACGGATATTTCGCTCTGATATCGAACGAGGATCAAGCGAATACGGGCAAACCGAGATACAGTTGTAAAATTTGTGTGAAACATTATGTGACCGAGAAGGGCTTGATGAATCATTTGAAAATCCACGACGGCAAGACTCACGCTTGTCAAACGTGCGGCATGAGTTTTCCCAAATTATCGAGTCTAAATCGTCATTTAAAGTCGCACGAGAGTAAAACGGTGAGCGTCGGAGCATCGCGCGAAACGAGTCACGGTTCAACGGACGCTGACAATgcgaaaaacggtgaaaaaaccGACGTCGAGACGGACGAGAATGAAAGCTTCGCTGAAAACGGAATCGACGAGTTCAACAACGCACCTGCTATTTACAAGTGCGAGGTCtgcgatcaatttttctcctcgctgAACAATCTCGAGAGACACAGCCTCGTGCacggtgagaaaaaatattcttgcACAGTTTGTCAAAAACGTTATTTCTGGGCGGacacgttgaaaaaacacgcgGAAAAGCACGGGCACGGTTTGTTGGATAATCTCGTTGATGATAATAAATTGTTCGAATCCGacgacgagaatttttcgaatgccGCGGTTggcaaagaaacgaaaatcaagAGCGGTAAAGCTGCGAAAGACGTTAGCGAGGACGATGTTATTGGTGAATACAAGTGTCAGCATTGTGATAAAATAATGACAACGAAGAAAGGTTTGAGGAGACACGTGTCGATGCATAAGCCAAAAGCCGAGCCGGTCACTTGCCAAATCTGCAAAAAAGTTTGCGCCAGTCAAATTCGCCTTGGTCTTCATCTTAAAACACACAATAAACCGAAGGAAAAGGTACAGCGTGAATATCTTTGCCACATATGCAGCAAAGTTTATCCGAGCAACTCGTCGTTGACTTATCACATGAGAACTCACACGGGTGTCAAGCCTCACGTTTGTAAAATTTGCAACAGTGGCTTTACGACAACGACGAGTCTTGCTAATCATATAAGAATTCATACGGGTGACAAACCGTTCGTTTGTCACGTTTGCAGCGCGGCTTTTGCCGTTAGCTCGGCTTACAGGCGGCATCTCACGAGACACACCGGAGAGGCTAATTATTTGTGCAAAACTTGCGGTAAAGCTTTCAAAAGATTGAGCACATTGAAAGAACATACTTATACGCATTCGGGTGAAAAACCGTATGTTTGCAAGACGTGCGGCGCTGCTTATAGTCACAGCGGAAGTTTATTTGCACATCAGAAGCGTTGCAGGATCACCGAAATGATTGAGGAACACAGTATTGCTCATCATATTCATGTTAATAATGTACAAACTGCGGTTCGCTCGCTCGCTGTTATAGGTCAGATGTATTAG
Protein Sequence: MAMNTSYFDQTLNIDRICRICLLEGANLSPIFCNKQEVNEFSGLQQKIQLCGSIEIHENDGFPSLICDVCIYKASIAHEFRQQCQQSDARLRLLYDKTNEANIVEFYRESCSQDEPQTRIIFTRKMPNQSDGYYVKDELQENSQNTQEYTTAIGGYTDANVRTVNGNENSISCQQEKLFLCNIASFEETKEITKQEGTILAVEASHQVDLPIVQTEITTTLMTVNADGELETRQLIVKDSDDKCNETAIEEEYLNEHMLSESVMEDSIEVDNSDFPEAEDKELLRQDEEDGTMAKCGNSSKNASKSYGENEIEDDGYFALISNEDQANTGKPRYSCKICVKHYVTEKGLMNHLKIHDGKTHACQTCGMSFPKLSSLNRHLKSHESKTVSVGASRETSHGSTDADNAKNGEKTDVETDENESFAENGIDEFNNAPAIYKCEVCDQFFSSLNNLERHSLVHGEKKYSCTVCQKRYFWADTLKKHAEKHGHGLLDNLVDDNKLFESDDENFSNAAVGKETKIKSGKAAKDVSEDDVIGEYKCQHCDKIMTTKKGLRRHVSMHKPKAEPVTCQICKKVCASQIRLGLHLKTHNKPKEKVQREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKICNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAYRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRITEMIEEHSIAHHIHVNNVQTAVRSLAVIGQMY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -