Hami001809.1
Basic Information
- Insect
- Heteropelma amictum
- Gene Symbol
- ZNF711
- Assembly
- GCA_959613375.1
- Location
- OY390720.1:30365807-30368778[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.081 7.2 7.4 7.9 1 23 64 86 64 86 0.98 2 20 1.4e-05 0.0012 19.2 1.3 1 23 96 118 96 118 0.97 3 20 2.5e-07 2.2e-05 24.7 0.5 1 23 124 146 124 146 0.98 4 20 0.00025 0.022 15.3 1.4 1 23 151 174 151 174 0.98 5 20 0.00011 0.0094 16.5 2.1 1 23 180 202 180 202 0.97 6 20 0.00027 0.025 15.2 0.4 1 23 208 231 208 231 0.97 7 20 8.6e-05 0.0077 16.7 1.2 2 23 242 263 241 263 0.92 8 20 4.4e-05 0.0039 17.7 2.7 1 23 267 289 267 289 0.95 9 20 2.3e-05 0.0021 18.5 0.4 1 23 295 317 295 317 0.98 10 20 2.2e-06 0.0002 21.8 1.6 1 23 323 345 323 345 0.99 11 20 0.00053 0.047 14.3 2.4 1 23 555 577 555 577 0.99 12 20 0.00034 0.03 14.9 0.8 3 23 589 609 587 609 0.91 13 20 8e-05 0.0071 16.8 0.7 1 23 615 637 615 637 0.96 14 20 0.004 0.36 11.5 0.3 1 23 642 665 642 665 0.96 15 20 5.5e-05 0.0049 17.4 2.1 1 23 671 693 671 693 0.96 16 20 0.00011 0.0098 16.4 0.5 1 23 699 722 699 722 0.97 17 20 1.1e-05 0.001 19.5 0.5 2 23 733 754 732 754 0.96 18 20 5.1e-05 0.0046 17.5 3.1 1 23 758 780 758 780 0.94 19 20 4e-06 0.00036 20.9 1.3 1 23 786 808 786 808 0.98 20 20 5.1e-06 0.00046 20.6 3.3 1 23 814 836 814 837 0.96
Sequence Information
- Coding Sequence
- ATGGAGAACGAGCCGACGACCAAAGTGGATAGGCGCGAGGATCATCCGGAAAGACGCGCCGAAGCCGATCCGCTCGACATCGGATTTCATCATTCGATGATGGACCCTTCGGGAAAAGTTTTACCATGCGGGAATATCGTTACGACGGATGGGAAAAAACAGTGCGAGAAGAAACGTGAATCCGTGATACACGAGTGCAAATCGTGCGATTATAAATTTTCTTGTAAATCCAAGTACGAGCGTCACGTGAAAACGCACGACAGAAAAACGGCCGATTCGACGAGTCACGAGTGCGCCATCTGCGAGCaaaatttcgcgcgaaaatCAGCGTACAACCGACACATGCTTAAACACAGCAATGACCGTCCGTACAAGTGCGACGTTTGCGGCAAAACGTTCAAGAGATCGTGGGAGGTCAGAACTCACATGGAGATACACAGTGGATCCATGTACACCTGCGAGATATGCAACTTCAGCACGGCGTACAAAGTCTCGTTGAAGACGCACAAGAGGCGAGTACACGAGAAGGACTATCCTCACAAGTGTGAAAAATGCGACAAGGCGTTCATGTCAAAGTACGAGCTGGATGATCATTTGACGAGTCATCTCGGCACGAAAAGCTTCGTCTGCGAGATGTGCGGCAACGCTTATTCGCAAAAGACCTATCTTCTGTATCACAAACGCGTCATACACGGTGTACAAAATCGCGCCCCGAAGGAGCTCAAGTGTGAAATGTGCGACAAGACATTCGCCACCGAATACTGCTTGCAGAATCACGTTGGCCTTCATTCGCAAAAGTTTTTGTGCTCCCAATGTGGCAAGGAGTTTGCGACTAATCACTCGCTGAAAATGCACAATCGCATGCACACCGGTGAACGTCCGTACAACTGCGACACGTGCTCAAAGTCATTCGCACGCTCGAACGCACTCGCCGTTCACAAACTTACGCACATTGGCGTGAGACCTTACGTCTGTGATTTGTGCGACAAGAGTTTCACCCAGCGTACGACCATGATGGCGCACAGGCGAAAACACCCCGGCAGTCATCCTCCGCCTCCGCCAACATCGTTGAGCAAATACGGCACGAAACGAGACTCGAGAACGTGCATCGAGACAGATCCGCTAGGGCCAGACTATCTGATGGTGAAGATAATGGATGACATTTATCGAATCCCCACGTCCAAGTGCTACATGGTGTTGACACGTCCGAAAATTCAGAATAAACCACCGTTGGAGCGAGTGTCCCCCAAGACGGTCGATAATACAGGGCATCGGGAGAAAATCGTCGCCGGAGGGGGGGACCGTTCGTCAGCGATCGAGCGATCCAGCGAGACACCAGCGATAAAGACGGAGTGTATCTCAGACATCGAGTCTCCGTGCGAACCGATCGTGAAAGTGCGGAGGAGGGGCAAAAAGCGCGGTGAGACGAGTGAGGATTCGCGTGCGACGAAAAGCACGGAAAAAGAGCACGGAAAAGACGGATCACGGCGGATCTTTGAGGATTTGGATGACGTTTCGCTGGATGACCGTCGATCTCGCGTGGAGAAGAGAAAGATCGGTGATCCCGTCACGGAAGAGAGACGggcggaagagagagaaaacagtAGCAGCTTCCTCAAAAGTAGCATCTCCTCCAAGAAGAAAAAGTCATCGTCCGGTCGGTACGAGTGCGCGCTTTGCGGCTGCAAATTCCGAGGAAAATGGAAATACGAGCGACACGTGAAAACGCACGTGAAAAAACGGGCCGAAGCTGTAAGCTTGGAGTGCGCACCCTGCGGCAGAAAGTTTAAGCACCCTTCCGCTTATAAACAGCACATGGTGAAGCACAGCGACGACAGGCCGCACAAGTGCGAAGTTTGCGGCAAAACGTTCAAGCGGGTTTCGGAGATCAAACCGCACATGGAGATACACAAGGGTGCCATGTACTCTTGCGACATGTGCGACTTTGCCACCGCGTACAAAGTCTCGCTCAAGATGCACAAGAGGGGGATACACGAGAAGAATCATCCCCACAAGTGTGACAAGTGCGACAAAGCGTTCATGTCAAAGTACGAGCTGAACGATCACGCCACGAGTCATCAGGAGGCAAAGAGTTTCGTGTGCGACGTGTGCGGCAACGCTTATGCGCAAAAGAGCCACATGATGACGCACAAGCGTATAATACACGGTGTAGGGAAGAGCAATCGAGAAGGTCTGAAGTGCGATTCGTGCGGCAAAACCTTCGCCTCAAAGTATCGCCTGCAGGAGCACATGATTCTTCATTCCCAAACGTTTTTGTGCTCCCGGTGCGGCAAGGAATTTTCGAACAAACATTCGTTACAAGTGCACAATCGTTTGCACACCGGTGAGCGGCCGTATCGTTGCGACACGTGCTCGAAATCGTTCACTCGTTCGGGTACACTCACCATTCACAAACTCATACACATAGGTGCGAGACCGTACGTGTGCGACTTGTGCGACAAGAGTTTCACCCAACGTACCACGATGATGGCGCACAGACGAAAGCATCATGGAAGCCATTCTCGACCTCCACCTACGTCTTTGAGCCAATACGACACTAAATCAGAGTCCACGACGTCATCGTCGCGAAAGCCCGATGCGGTGTAG
- Protein Sequence
- MENEPTTKVDRREDHPERRAEADPLDIGFHHSMMDPSGKVLPCGNIVTTDGKKQCEKKRESVIHECKSCDYKFSCKSKYERHVKTHDRKTADSTSHECAICEQNFARKSAYNRHMLKHSNDRPYKCDVCGKTFKRSWEVRTHMEIHSGSMYTCEICNFSTAYKVSLKTHKRRVHEKDYPHKCEKCDKAFMSKYELDDHLTSHLGTKSFVCEMCGNAYSQKTYLLYHKRVIHGVQNRAPKELKCEMCDKTFATEYCLQNHVGLHSQKFLCSQCGKEFATNHSLKMHNRMHTGERPYNCDTCSKSFARSNALAVHKLTHIGVRPYVCDLCDKSFTQRTTMMAHRRKHPGSHPPPPPTSLSKYGTKRDSRTCIETDPLGPDYLMVKIMDDIYRIPTSKCYMVLTRPKIQNKPPLERVSPKTVDNTGHREKIVAGGGDRSSAIERSSETPAIKTECISDIESPCEPIVKVRRRGKKRGETSEDSRATKSTEKEHGKDGSRRIFEDLDDVSLDDRRSRVEKRKIGDPVTEERRAEERENSSSFLKSSISSKKKKSSSGRYECALCGCKFRGKWKYERHVKTHVKKRAEAVSLECAPCGRKFKHPSAYKQHMVKHSDDRPHKCEVCGKTFKRVSEIKPHMEIHKGAMYSCDMCDFATAYKVSLKMHKRGIHEKNHPHKCDKCDKAFMSKYELNDHATSHQEAKSFVCDVCGNAYAQKSHMMTHKRIIHGVGKSNREGLKCDSCGKTFASKYRLQEHMILHSQTFLCSRCGKEFSNKHSLQVHNRLHTGERPYRCDTCSKSFTRSGTLTIHKLIHIGARPYVCDLCDKSFTQRTTMMAHRRKHHGSHSRPPPTSLSQYDTKSESTTSSSRKPDAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -