Basic Information

Gene Symbol
RERE
Assembly
GCA_959613375.1
Location
OY390722.1:23190210-23198391[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-08 4.1e-05 23.7 0.2 2 45 129 173 128 174 0.88

Sequence Information

Coding Sequence
ATGTCCACCGGCACGCAAGGGGAGATTCGAGTCGGTCCATCGCACCAGGAGTTGGTTTCTTGCCAGGCCCGTTTGCCTGATTACCGGCCGGGCGTACCGGCTGCCGATCTACTGCCCGATCCCGAGTTCTCCAAGGAGCGCGAAGAGCTGAGATGGATACCGGCAATGTCATTGGACGGCGATTTATTAATGTACCTGAGGGCGGCTCGTTCTATGGCGGCGTTCGCCGGTATGTGTGACGGCGGTTCACCCGACGATGGTTGCGTAGCAGCATCCAGAGACGATACTACTATTAATGCGCTCGATATACTTCACGATTCGGGCTATGACCCAGGTAGGGCCTTACAAGCCCTTGTTAAATGCCCAGTGCCCAAaggaatcgataaaaaatggtCCGAAGAAGAGACAaAACGTTTCGTCAAGGGTCTGCGTCAATTCGGCAAAAACTTTTCGCGCATCAGGAAGGATCTTTTACCCCACAAAGACACGCCggaactcgtcgagttttatTACCTCTGGAAAAAGACTCCCGGCGCTAACAATAATCGTCCGCATCGGCGACGACGACAAGGCTCACTGCGGCGCATACGTAATACGCGCAATTCACGGGCAGGCACGCCGAAGGAAGAAGTCTCAGCGTTGCAGCAGCATCAATCTGCTGGTCTGGGAAAAGAGGATCAATCGGGAGGCGTGAGCAACGGTGAAACCAAAGGAGAAATCGGAGAATCTCGCGGGAATCGCGAGGCTAAAGAGGCGACGAGTTCCGAGTCTGAAATTACGACGCCCGGCGGCGATGGCGGTGCTTCCGGTGGTGGAAACAGTACTGGTGCTACGAGTaacaataacaaaaattcaagtaATAGCACCAATGCAAACAGCAACAATAATCCCGGCGGTGAGATAAGCTCAGTGACGGAGGATGATAATTCGGAAGAGGACAGCGATTCACGTGACACGAACACGAATGGTTTAGCACTATCGTCGTGTCAGCATTGCTTCTCCCCGGTCTCGAAGGATTATCAGATATCCGGCAAGGACAGACCGTTGCTGTGCACCGATTGCCGTACGCAGTCGAAGAAAAGCGGCGGTGAAGCGCCACCAGCGCCACCTTATCTCTTCAGGCCGGTACCAGCCGAGTCGCCCGACAGCCCTGGTAGAATGAGAACGCGGAATAATAAAGTCAAAGAATCGCCGAGACCATCGAGACTGAGGCGCGCTGGCGGTGGTACCGACACACCGGAAAGCGATCAGAAATCGCGAAGTGGtgaacagcagcagcaacaacaacaacaacaacaaccaCGCGAATCTCAATCGAGAGATTCGGCGGCATTGCGAGATTCTTTGAACGTACAACAATCCACTGAGAAAACAAGAAAGTCTAAATCTGCCATCGGTGTGGCCGGAGCGAGTGGTCCTGGATCTACAAAATTGGAGACTCCGAAGAAAGGACAGAAGAGATTGCAAGTTGACGATATAGACGAGGAGAAAGATTCTCAGAAGCGAAAAAGAGGGGCAATCAGCGTTGGAGGCGATAGACCGGAAAGTCCATCGGAGTCATTGACGACGGACAGCAATTCCCTCATAGACGACGGTGAACGAGAGGCTGAGCCGGAAGCCGTCGAAAATCTTTCGACGAATACCGGGATAACCGTACCACCGTCAGGGACATCAATAACGGAAGAAACGGCGAGTCTCGCAGCCGCGGTTATCGAGGAAGAATCATCGGAATCCACCGTAGCTGCTGCGCCGGTTCATCCGGCAATTCATAATCTTCCCATAAACCCCGCCGTTCATCTTCCGCTGGAGCAGAAGCCGACGATCGATGAAATCACAGGAAATATAGGGAAGACGTCGCCGGAAATCAAAATGGAACTCGACGAGGCACCGTCGATTCCTTCGATAATTATTCCTATGAGGGAACAGCAAGAACCGATCCAATTGAAGATAGAGCCGATCGCTTCGGAGGCTGAAATGCCCTCTCCAAGCCACGAGGATTCTAAAGATTTAGTTGATCAAATGCAGCCGCAGATCCGACAAACACAGCCTCAAAATTCGAGCGCGGTCCCCCCTGCGCAGGCGAATTCGATGATTGACGTCGCGCAAAATATGCAACGTAGTTCGAGTCAACAGTCATTGACACCGACATCGGGAAATTGCGTACCGAATGCTCTGCCCATGTCGCAATCCTTGATCCCAGGTTCGCTTCCATCGTCGCAAATTAGTCCGCTCAATAGCTTACCTCAGCAAATCCCATTACCGCAACAGGAGGCTGCTTCAATTCATCACTTGAATATGCAGTATCCCGGTATGCAGCAACAAAATACACAAAGTTTGCCGCGTGATTTATCGCACGGTGTGCAAATACCCAGTGGCTTGGGTCCCGCGCTGGGACCACCACCGATTTTAGGTCCTTCCGGTCGTGATCATGTAAATAGTATATTACCTCCGCAAAATCTCACCAATCATCCTGAGGGTATTGCGAGCGTGCAAAACTTGACGGCCGGAATTTCCGTTCCGGCGTTGAACTTAAACATTGCCCAGAATCTAGTTACCAACATGTCACAACTCTCGTCCGAATCGCCACTGCCATTGGGTCTCGCGGTCATTCCGCAGCAGCAAAACAATCGATTATCGGATAGAATTCGCGATGACGATGTGAGAATGAATCAAACAGCTGAGCGCATGCGCGACCCGCGATTGATGATCGATAACGGCCATTCGGAAGGGTTGATGGCCGATCGAGCGATGGACGGTTGTTCGAACAACAATCCCGACGACAATCGTCCGGACAGATCGGAGCCGCtggccaatttttttcagccaaTTCCACCATCACCCAGCGTTACGAGTCTATtgaattcggaaaaatccaTCGGGCCATTGTACAGTCTCTCCAATACACCGCCGTTGGAACCTCAGAATTTGAAGATCAAACAAGAAATTGGTCTTTCGGAGCTCGACCCGCTGCAAAGTCTAAAGGAGGTCAAAGTTCCGGGCTTTCAGGGCAATTTTCCAGGCCCACCTTTGGacaatattaaaaaagatCCTGACGCGAGTAAACCTCCTACACCGAGCAAACAGTCGCACTCGAGTTCCCAGCATCAGCAACAATTGCAActccatcatcatcatcatcaccatcatcatcagcagcaacaacaacagcagcaacagcaacaacaacagcagcagcagcaacaacagcagcaacaacagcagcaacaacagcagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcaacagcaacagcagcaacatcAACAGCAGCAAGTCGCTCAAATACAGTCAGTGACGGCATCACCGCAGCCGAGCCTACCTCCTCCGCCGACGTCCATTCCTCAACCCGTAATGCATCCCTCGCAACAACCGAGTCCCCACATGACCCATCCTTTCCATCCCCATCATACTTTGATGCATCACTCTATATTCGCTGCTATGCATCCGTATCATCCCCATGCGTACTCGGGCTACCCGCCCGTCGCTGGTTATCCCTCGTTCTCGGCTTATCCATATGGACCAGTGCCTCACGCGATTCCGCCGCCTTCGCCTCAACGCAATCAAGAGAGCGCGGGCCCCATGTTGCCGACGCATCATTCGGGCACAAGCTCATCGAGCGTTCCAGCCCCTCGTGACGAGGGTGACAATTTAATGACGAATCAGCATCACCAGTCCTCGACGCATCAAGGTGGTGGCAACCTCCATCACGATAAGCTGATGACTATTTCATCGCACAGTACGCACGGCCATTCGTCGACGGTTCATTCGAGCTCGCAGAGGAAACCTTCGCTCGTTTCTTCCTGCTTGATGTCCACGAGTTCTTTGCTGCATCATCACCAACATCGTgcgcatcatcatcatcaccatcatcatcatcaacagcagcagcagcaacaacagcagcaacaacaacagcagcaacaacaacaacaacagcagcaacaacagcaacagcagcagcagcagcagcagcaacaacagcagcagcaacatcAACATCAACAGCAAAAGCAACAGCAGCAAATCATACAAATTTCCGAGCCGAAAATCGAACAGGAAATAATCGAACCGGAACCGGAGGAGCCACAGAGTCCCCGTGGCCCGTCGCCCGAGCCTAGAATCGAGGATTCCGAATGTCATCGATCGCAATCCGCTATTTTTCTACGGCACTGGAACAGAGGTGAGAATAATTCTTGTACGAGAACGGATCTTACGTTCAAGCCTGTGCCGGACTCGAAGCTCGCGAGAAAACGCGAGGAAAGATCGAGAAAGCAggcggagagagaaagagaggagagagatcGGGCGACGGCGGCGGCTCAGCAGGCGAGAAAGATGACGACGCCTGAGAAGCAATCGGAGAGCTGCAAACCTCCTAGTAGAGGACTCCTGGAGCCTGTCGTGTCGCCTTACGACAGATACGCGGCGGCGAGACCCGGATCTTACGCGGACACTCCGGCGTTGCGGCAATTGTCGGAATACGCGAGGCCGCATGCAGGCTTCTCACCAGCGCGACACTCGGCGCCCGCTGATCCTATGCTGCATTACATGTACGGACCGGGGGCGCGCGAGCGTCTCGAACTCGAGCatctcgagagagaaaagcgagagCGTGAGATTAGGGAACTTAGGGAACGAGAACTCAACGATAGACTAAAAGAGGAATTACTCAAGGGAGCACCGAGACCGATGGCAACCCCGGTTGATCCGCATTGGTTGGAGATACACCGTAGATACGCTGCTGCGGGTCTCGCGCCAGGGCCTTCAGCGCCGCCACAGGGTCTTCATCAATTTGGGCTGTACGGGGCCCCACCTGGTCCCAGTCAGCTTGATCGGGAACGTCTCGAGCGATTAGCGGCAGCAGGAGCCAATTATCCTCGGCCGGGTATGATGCAGAGGGATCCTACCTTGGGACTTCATCCAGCTGAACTTCTTGGGCGGCCTTACGCGGACATGACCGCCCATCACGAGCAACTCCAGCGTCATTTGATAATGGAGAGGGAACGCTTCCCACCCCATCCTTCATTGGTCGCGCATCACGAAGAATATCTAAGACAACAACGGGAACGGGAGCTGAAAGTTCGAGCACTGGAAGAAGCGGCGCGTGGATCCCGACCTTAA
Protein Sequence
MSTGTQGEIRVGPSHQELVSCQARLPDYRPGVPAADLLPDPEFSKEREELRWIPAMSLDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEVSALQQHQSAGLGKEDQSGGVSNGETKGEIGESRGNREAKEATSSESEITTPGGDGGASGGGNSTGATSNNNKNSSNSTNANSNNNPGGEISSVTEDDNSEEDSDSRDTNTNGLALSSCQHCFSPVSKDYQISGKDRPLLCTDCRTQSKKSGGEAPPAPPYLFRPVPAESPDSPGRMRTRNNKVKESPRPSRLRRAGGGTDTPESDQKSRSGEQQQQQQQQQQPRESQSRDSAALRDSLNVQQSTEKTRKSKSAIGVAGASGPGSTKLETPKKGQKRLQVDDIDEEKDSQKRKRGAISVGGDRPESPSESLTTDSNSLIDDGEREAEPEAVENLSTNTGITVPPSGTSITEETASLAAAVIEEESSESTVAAAPVHPAIHNLPINPAVHLPLEQKPTIDEITGNIGKTSPEIKMELDEAPSIPSIIIPMREQQEPIQLKIEPIASEAEMPSPSHEDSKDLVDQMQPQIRQTQPQNSSAVPPAQANSMIDVAQNMQRSSSQQSLTPTSGNCVPNALPMSQSLIPGSLPSSQISPLNSLPQQIPLPQQEAASIHHLNMQYPGMQQQNTQSLPRDLSHGVQIPSGLGPALGPPPILGPSGRDHVNSILPPQNLTNHPEGIASVQNLTAGISVPALNLNIAQNLVTNMSQLSSESPLPLGLAVIPQQQNNRLSDRIRDDDVRMNQTAERMRDPRLMIDNGHSEGLMADRAMDGCSNNNPDDNRPDRSEPLANFFQPIPPSPSVTSLLNSEKSIGPLYSLSNTPPLEPQNLKIKQEIGLSELDPLQSLKEVKVPGFQGNFPGPPLDNIKKDPDASKPPTPSKQSHSSSQHQQQLQLHHHHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQVAQIQSVTASPQPSLPPPPTSIPQPVMHPSQQPSPHMTHPFHPHHTLMHHSIFAAMHPYHPHAYSGYPPVAGYPSFSAYPYGPVPHAIPPPSPQRNQESAGPMLPTHHSGTSSSSVPAPRDEGDNLMTNQHHQSSTHQGGGNLHHDKLMTISSHSTHGHSSTVHSSSQRKPSLVSSCLMSTSSLLHHHQHRAHHHHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQHQQQKQQQQIIQISEPKIEQEIIEPEPEEPQSPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLTFKPVPDSKLARKREERSRKQAEREREERDRATAAAQQARKMTTPEKQSESCKPPSRGLLEPVVSPYDRYAAARPGSYADTPALRQLSEYARPHAGFSPARHSAPADPMLHYMYGPGARERLELEHLEREKREREIRELRERELNDRLKEELLKGAPRPMATPVDPHWLEIHRRYAAAGLAPGPSAPPQGLHQFGLYGAPPGPSQLDRERLERLAAAGANYPRPGMMQRDPTLGLHPAELLGRPYADMTAHHEQLQRHLIMERERFPPHPSLVAHHEEYLRQQRERELKVRALEEAARGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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