Hami014010.1
Basic Information
- Insect
- Heteropelma amictum
- Gene Symbol
- -
- Assembly
- GCA_959613375.1
- Location
- OY390727.1:3204057-3206031[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-08 2e-05 24.3 0.1 3 39 17 53 15 56 0.91
Sequence Information
- Coding Sequence
- ATGGTACGTATGTACGTGAGAAAGACGAATCGGGGCTGTTGggacgagagaaagatggTTGCCGCGATGAACGCGATATTAGCGCGAAAAATGGGCTACATGAAGTCGTCGAAGGTCTTTGGAATTCCGAGATCAACGCTGAGGCGTATAATGAAGAGATTAGAGGCGAACGGCGAAGTCAACATAAGAGTGCCATTGGGTACAAACGCGTCCGTGTTCACAAAGGAGGAGGAGCAGTATCTCGTGTCGCATTTGAATTCGATGACCAGCAGATTGTTCACGGTTACGATACCGATAAAACGCAAATTGGCTTATCAGTTGGCAACGAAGAAGCACAAATCGCACAAATGGAAGGACAACGTGGCGGGTCGCGAGTGGCTCCGGGAATTCGTCAAGAGGCACAAGCTCAATTGCCAGTCGATCGGCCGCCCGGTGACTAAAACGAAGCTCGCTTGCTTCAACAAGGACGCCGTGATGAAATTTTACGAGGTCCTCGGCGAGCTTTATCTCAAGCACAATTTCACCGCCGATAGGATTTACAATTGCGACGAGACATCGATAAGCTGCGACACAAAGTCGCAGGGCAACGTTATCACGATGTCGGAAACTGGCAAagcctcgtcgtcgtcgtcggcgtcgtcgtcgccgaCGACAAACGACTCGGGTCATACGATAACCGTCGAAGTTTGTATGAGCGCTACGGGCTTGTTCATGCCGTTGCTCTTTGTATTTCCGCGGAAAAATCTCGAGCCGCAATTCACGAATAATCTCATACTTCCTTGTTACACGCGTTGCAACGAGACCGGCTGGATGCACAGCGACATATTCGCGTGGTGGTTCGAgcatttcgtcaaattttcacgGGCCAGCAAGGACAATCCCGTGCTTTTGCTGATGGACGGTGATTCGAGTCACACGACTAGCCTCGAGCTTCTCGAAATGGCGGAAAATCACGGGGTCACGATGTTGTGCCTCCCCGAATATTGCACGCACAAGATCGGCCCTCTGGAGGTCGAATTTTTCGGCACACTCAGCAAACACTACGTTTCAGCGAGCAGAGAATGGTCCGCGTCCAATGGCGGACGACCGCCCGGTATTTACGAAATTCCGATGCTCTTCGAGCAGGCCTTCATACAATCGGCGACCCTCGCCACCGCCGTGATCGCCTTTCGTAAAACCGGCATATGGCCGTTCAAACCAAACACCTTCAGCGATCACGACTTTACCGGCGTCGGAACGTCTCTTCTTCCTCATCAAATGGCTTCGACGATGCAACAGAGCGCTGATCAAAAtatcaacaacaacaacaacaacaataataataacaccTCGACGGTCGTAACTCAAAACTCCAGTAGCCAGAAAGAAACGACGATCTCCGCGATGCCTGGATCCTCCTGGAAACCAACCAACAATTGTGCCGTCAACGAGATGAGAGTCAATGGACCATCGAGTTGCGTGGAGGCTGTGGCAGGACCACAGATGCAGCCACCGAGAAAACGAATGTATCCCCTGCAAGATCCTCTACAGTTACCGATACAACATTATCAGACGAATTATCAAGAATCCCCGATTCCTGGTCCATCCTGGAAACCACCGTCGTCCGTCAATCCTGTGAACGAGATGCGACTGTCGGCATCCTCGGCTTACGTCGAAGCTGTCCTCGGCGGTCCGCAGAATCACCCGACGAGAAACATGGAACAGTCCGAGGGTCCAGGATGTCCGAACGATCCAGCGATGTACAGTATCATACCGCACATGTTTTTGTAA
- Protein Sequence
- MVRMYVRKTNRGCWDERKMVAAMNAILARKMGYMKSSKVFGIPRSTLRRIMKRLEANGEVNIRVPLGTNASVFTKEEEQYLVSHLNSMTSRLFTVTIPIKRKLAYQLATKKHKSHKWKDNVAGREWLREFVKRHKLNCQSIGRPVTKTKLACFNKDAVMKFYEVLGELYLKHNFTADRIYNCDETSISCDTKSQGNVITMSETGKASSSSSASSSPTTNDSGHTITVEVCMSATGLFMPLLFVFPRKNLEPQFTNNLILPCYTRCNETGWMHSDIFAWWFEHFVKFSRASKDNPVLLLMDGDSSHTTSLELLEMAENHGVTMLCLPEYCTHKIGPLEVEFFGTLSKHYVSASREWSASNGGRPPGIYEIPMLFEQAFIQSATLATAVIAFRKTGIWPFKPNTFSDHDFTGVGTSLLPHQMASTMQQSADQNINNNNNNNNNNTSTVVTQNSSSQKETTISAMPGSSWKPTNNCAVNEMRVNGPSSCVEAVAGPQMQPPRKRMYPLQDPLQLPIQHYQTNYQESPIPGPSWKPPSSVNPVNEMRLSASSAYVEAVLGGPQNHPTRNMEQSEGPGCPNDPAMYSIIPHMFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01306377; iTF_01102711; iTF_01101974; iTF_01101247;
- 90% Identity
- -
- 80% Identity
- -