Hami010453.1
Basic Information
- Insect
- Heteropelma amictum
- Gene Symbol
- -
- Assembly
- GCA_959613375.1
- Location
- OY390724.1:10087764-10089178[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7 9.8e+03 -3.5 0.1 32 39 17 24 17 27 0.79 2 2 2.2e-14 2.5e-11 43.2 0.0 1 42 95 135 95 136 0.96
Sequence Information
- Coding Sequence
- ATGCACGACGGCACGTCATCGTGCGACAACAACGACAATCACGGTGTGACTTTGCAAAACCGAGCGAGAAGATCGAGAATATCGACGAGCATGGGCGATGGAAGGCGACGAACTACCCCGCAGGGAAAATACAAGTGTAACAAGTGCTCCAAGACATATCGCTGGAAGCAAAATTTGACCGAGCACGCTAAAACATCGTGCGGTTTGACCAAAGAGGAACGATGTCCGTTTTGCAGCTACTgTCGAATCTTGTGGCCGGGTCAACGTGTGAGACTCGGGGATGATCCGGATCGCATGAAAAGAGCGATCGATGCCGTGAAAAACGGACTGTCTCTGAGAAAGGCAGCTGTGATGTTTGACGTTACGAAATCGAGTCTGCATCGTTATATTCGCGTGACAATGAGTAACTGGATCTTTCAATGTCCCCGTTGCGGCACGATGCATCGTCACAAGAAAAATTTACTGAGACACATGGCTATCGAGTGCGGCAAAGATCCCGGATACAGATGCGGATACTGCGATCACAGATCAAAGAGGAAAGGAAACGTCGTGGCTCACGTGAAGCGAAGACATCCCGGGCTCGAAATCAGATGGACAATGATGGATATATTATAA
- Protein Sequence
- MHDGTSSCDNNDNHGVTLQNRARRSRISTSMGDGRRRTTPQGKYKCNKCSKTYRWKQNLTEHAKTSCGLTKEERCPFCSYCRILWPGQRVRLGDDPDRMKRAIDAVKNGLSLRKAAVMFDVTKSSLHRYIRVTMSNWIFQCPRCGTMHRHKKNLLRHMAIECGKDPGYRCGYCDHRSKRKGNVVAHVKRRHPGLEIRWTMMDIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00798914;
- 90% Identity
- iTF_00798914;
- 80% Identity
- iTF_00798914;