Hami005271.1
Basic Information
- Insect
- Heteropelma amictum
- Gene Symbol
- klhl36
- Assembly
- GCA_959613375.1
- Location
- OY390722.1:4241523-4244222[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00079 0.9 9.4 0.0 3 37 205 239 203 246 0.81 2 4 1.2e-10 1.4e-07 31.2 0.0 5 39 257 290 254 297 0.85 3 4 0.0015 1.7 8.5 0.0 7 34 311 337 307 342 0.85 4 4 3.5e-12 3.9e-09 36.2 0.1 4 38 368 402 365 406 0.94
Sequence Information
- Coding Sequence
- ATGTCGTCAATAATAACAGAGAGTACCAATCAATCCGAGGCCGAGGAGAGTTGTTATTACAAATGGATTGGTCATCAAAATCATTTATCCGACGTTGTTCGACAGCTTTTAGAAGAAGAATGCATGGTCGACGTGACACTCGTTGCAGATGGAGAACGCATACAGGCTCATCGCATCGTACTGTGTTCCTGCAGTACTTTGTTTCAAGATATACTCAGTCAGGTTAATGAAGAACATTCAACGATAATACTTAGCGACATATCGGCACGGGATGTGAGATCAATTGTAGAATTTAGCTACAATGGCGAAGTCAGAATTCCTGTCGAAAATATCAGCAATTTACTGGAGGCTGCGCATTCGCTGAAAATATGCGGTCTTATGGAGATCGATGGGCTTGATGAGAATGATGCAATAATCAGTAGCAGAGATTCGGGCGACGATAACGTCGaatctttgatgaattttgAGGAATCGAGTAACAATGCGCTAGATCCCCTGGACGATGCATTGTCATACGAcgatgttaaaaaaagttgcgaAAGAACGGCGAGCGGATTATCGTATAAGGGAAAAAAGCGTCGAAGACAAGTATGGAAACGTGATTATAACGATGAAATGTTAGCCTCGGCTATAAACGATCTTAAATCCGGTCGGACTCTTGTAGAAGcttcaataaaaaatcacaTACCTCGTTCGACTCTTTACATGAGAGCTAAAGCGATGGGAATACAATTGAACGCTTCGAGAAACGAGTATCCAGCGGAATGTATGAAAGCCGCGATTGACGCTGTTATCGAGGGTTCGAGCTTGCAGCACGCGTcggacaaatttttcataccGAAAACCGTGCTCTGGCGGCGAATACAAAAAGAGGGATATCAGATATTACGCTCGGAGGTAAAACGTTCGTACGGtcaagaaaaaagagaggcgGCCGTTAAAGCTCTACAGAGAGGCGAGAATTTGACCAAAGTTGCACAAGAATTTCAGATACCAAAAACAACGTTGTTCCGTGACAAAGTGAGATTGGTGGACGAGGGAAAATTGCCAGAGTCTTTctggaagaaacgaaaaaccgGTAACGAGGAATGGAAGAGGCTGCGTCTCGAGGAGGCAGTTGCCGTCTGCAAGGAAGGCAAAATGTCACAAGCGGCTGCGGCCGTGAAGTACAAAATACCGAAAACGACGATATGGCGGAGATTGCAGCAGGATGGGAAAAACAACGGGAGAGAAACGATCGCTAAAGCATCCGAGTGTACCTTTGTCGAGAACGAGGgaaaagttttcgagaaaagtacACGGGAGAGTCAAGAATACGCTCTGTGCGATGTTCCCACGGAAATTCCAATAACGTACATGGATCAAAATTTGCCATCCGATTCCGTCCTAATACTGACGACCGAAGACGTCGACGGCTTGAGTCTCGAAGAGGGCAGAGAAATGATCGTTAACGATGACTCCGGACAGGAGTACGTTCAATGCGCTCTCGACATATCCGATAACACAGAGACGTATCAGCAAGCGGAGAGCTAG
- Protein Sequence
- MSSIITESTNQSEAEESCYYKWIGHQNHLSDVVRQLLEEECMVDVTLVADGERIQAHRIVLCSCSTLFQDILSQVNEEHSTIILSDISARDVRSIVEFSYNGEVRIPVENISNLLEAAHSLKICGLMEIDGLDENDAIISSRDSGDDNVESLMNFEESSNNALDPLDDALSYDDVKKSCERTASGLSYKGKKRRRQVWKRDYNDEMLASAINDLKSGRTLVEASIKNHIPRSTLYMRAKAMGIQLNASRNEYPAECMKAAIDAVIEGSSLQHASDKFFIPKTVLWRRIQKEGYQILRSEVKRSYGQEKREAAVKALQRGENLTKVAQEFQIPKTTLFRDKVRLVDEGKLPESFWKKRKTGNEEWKRLRLEEAVAVCKEGKMSQAAAAVKYKIPKTTIWRRLQQDGKNNGRETIAKASECTFVENEGKVFEKSTRESQEYALCDVPTEIPITYMDQNLPSDSVLILTTEDVDGLSLEEGREMIVNDDSGQEYVQCALDISDNTETYQQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00798708;
- 90% Identity
- iTF_00798708;
- 80% Identity
- iTF_00798708;