Basic Information

Gene Symbol
ct
Assembly
GCA_959613375.1
Location
OY390726.1:437125-454708[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.8e-27 5.7e-24 84.0 0.0 2 72 530 601 529 606 0.95
2 3 3.2e-32 1e-28 99.2 0.0 2 77 950 1026 949 1028 0.96
3 3 2.3e-31 7.4e-28 96.5 0.0 3 76 1200 1274 1198 1277 0.96

Sequence Information

Coding Sequence
ATGCCGGATGCTGTGTACTACATCGACGTGTGCATCTCGCTGTCGCCAAGAGCACCCATCAGCCAATTGGTCGACGAGGTTTCGAGGTTAAAACAGAGCCTGCAGCGACTCCAGGAGACGAGCTCGCAGACGACGAGCCGCCTCGAGGAGGAGCTCGAGGCGCGGAGACAGCACATCAGCCGCTTGGAGATGAAACTCGAGCGGCAGCGCGACTACGACGACATGAAACGTGAGATAAGCATTTTTAGATCGGTCGATCTCTCGCAAATACCGACCGGCGAGCCCGGCAAGAGCCTCGAACATCTCCTGATGGAAAGATCCAAAGCcctgcagcagcagcagcaggcgGAGACGCTCAAGCCGCCGAGCACGCCCGACGCACTCGGTGGACTAGCCTCGCCACTTCAGCGCGCCGCGACCGCTTCGCCCCACGCGCTCGGTGGTGGCAACGTCGTTTCCGGCGGGAGCGCTCCGCCGCCACCCGCGTCCCTCTTGTCCAACACCCAACAAGCGATCCCGACGCGCTCGACCCCGACACCCTCCTCGGCGGCGAATTCCACCGCCTCGAGCATCCTATtcccgccgccgccgccgccgccaccgccgccgctcCAAAACGTCGAGACCTTTGGCTCTTTCCTCGGTGAGGAGATTGTCGCCAACTGGAGGCGCTCCCTGGAGAGATCAATCATGAATCAGCAGCAGCAaacgcagcagcagcaagcGCTTTCCCAGCTCCAGCAGACACAGCCGGCTGTCGCCGCTGCTGTTGTTGCCGTCCATCAGGCActccagcagcagcagcagcagcatgcGATCCACTCGTCGTTGAATCCCCCGaccgcgacgacgacgacgacgacgacgacgacgacgaccaaCAACCTAAACAACCACCACCTTCCATCGCCAACAGATAATCCATCGTCATTGGCTTCGCTGAGCAGCAACGCCCCGGCGAAATGCAACACGCCGCAATTGGGCGGCGGTGGGGCCAGCGGCCTGGACGCGACGGAAAAAGCGCCAACGCCGATACCCGGCCACGAGACACCGGCACCGCCGACGCCGTCGTCGACGGTGGCGCTGACCTCGCCGTCCTCGATACCCAGCGGCATGTCGTTGAACGCGCTCCAATCGGCGCACTCGatctcgtcgacgacgacgacggcgtcGACGccgccgacgacgacgccgccgacgacgacgacgacgacgatccTCGACGCGTTGCAACACACGACCAACGGCGTGACCATCAACGGCATGGGCATGTTACCGCTGATGGCGCCAACCTCCTTACCACCAAAGAGCCCCCAGGACGACTCGTGtcaaaacaacaacaacaacaacagccacaacaacaacaacagtcACCATTTGACCAACAACAACATCGGCGGTCTGAGCCTGCTCGACTCGTTAAAGAGCCCCTTCCGCTTCGACGACCGGACGCATCCGTTCAGATTCGGGGACGAGTTCGGCGCGGCCGGGATGGCCGGCAGACTCGGCGAGTCCCTCATACCAAAGGGCGATCCCATGGAGGCCAGACTCCAGGAGATGCTCCGCTACAACATGGACAAGTACGCCTCGCAGAATCTCGACACGCTGCACATCGCCAGGCGCGTCCGGGAGCTACTCTCGATTCACAATATCGGCCAGAGGCTCTTTGCCAAGTACGTCCTCGGACTCAGTCAGGGCACCGTCAGCGAGCTCCTCAGCAAACCGAAACCGTGGGACAAGCTCACGGAGAAGGGACGCGACAGCTATAGAAAGATGCACGGATGGGCGTGCGACGAGAACGCCGTCATGCTACTGAAATCGCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGACCAGGGTATGCCGGCGTTTGGACGCGGTCCGCAGGACGGTGGTCCAAACGACATGAGCGACGAGAGGCTGGCGCACATACTCTCCGAGTCGGGGCATCTCCAGATGAGCAGGAGCGAGCACGAGACGTCAAACGACGCGGACAGCAAGAGTCCCAGTAGACTGGGATGTCCGAGTCCGTTCGGCAAGGACAGAATCGATAATCAGAACAGAAGACTGAAGAAATACGAGAACGACGACATTCCTCAGGAAAAAGTTGTGCGAATATATCAGGAGGAACTGGCGAAGTTGATGGGCAGGCGAGTCGACGATCTGCGAGGTCCCCGCGATTTTCCACCGGGCGCGATgtttccacattttttcagTGGCGCCCAGGGCCTCCAAGGCATGGAGAGGACGCAGGAGGAGATAAGAATGGCGTTCGACGCTTATCATCGTGAGTTTCAAAAGCTGAACGCGACGCAGGGCGGACAGAGCGCGGCTGCTCTGGCGGGTCTGCCGGGTTTGCCGAACATACCGGGTCTGTTGGCACTCCAGCAGCAGGCTcttcagcagcagcagcagcagcagcagcacttGGCGGCGAACGGCGGTGTCGTGCAGGATCTCAGTCTCGGGAAAATCGATCCTCGAAGCAAAATGATGAACGGCGGCGTCGTGACGGACGAGGACAAGGACAAAATGGAGGAGGCGATGAGACACGCGGGCAGCGCGTTCTCCCTGGTGAGACCAAAGCAGGAGCCGAGCGGCGGGGGAGCGCAATCGACGCCGGGTGGATCGAGCGCGAGTTCGCCCCTCGGAAACTCGATTCTGCCACCGGCGATGACGCCCAACGAGGAATTCACGGGTGCAGCCGCGGCGAGTCCTCTTCAGAGAATGGCCTCGATAACCAACAGCCTGATAAGCCAACCATCGACCCCGACGCATCATTCGACCACGCAGAGGCCTCTCAAGGCCGTATTACCCCCGATAACGCAGCAACAATTCGACATGTACAACAATCTTAACACGGAGGACATTGTTAAGAGGGTCAAGGAGCAACTGTCGCAGTACTCGATTTCCCAGCGACTCTTTGGCGAATCCGTGCTGGGGCTCTCGCAGGGCTCCGTCTCGGATCTCCTCGCGAGGCCAAAGCCCTGGCACATGCTCACGCAAAAGGGCCGGGAACCCTTCATCCGGATGAAAATGTTCCTCGAGGACGACAACGCCGTGCACAAATTGGTCGCCAGCCAGTACAAAATCGCCCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTCAACTCAGCCTGTGGAACGCCGATGAAGCCAATGCCACCGACCAAGCTGGTGCAGGAGCAGTTGCAGAACGCGGCAAAGGCGCAGGCGGCGGCGCAGGCGGCAGCGCAGGCGGCAGCGGTGGCGCAGCACCAGCAGGAGAATCAAATGTCCCTCGGTCCACCGCAGCCGAGTCCGCAGCATCAGTCGCATTCCCAGCAGCCACCGCAGGCGTTGATGCTGACGCCACCCGGACCTCATCATCCTCACGGTCAGTTCAGCATCCAGGAGTTGCAGaagaagcagcagcagcaagtGCAGCAGCAagtgcagcagcagcaacaacagcagcagcagcagcagcagcagcaacagatGAGCCTCCATTCGCCGCATCAATTGGCGCCGTCGCCGCTGCGAAACCTTCATCAGCACATTTCGCCGAGCGTTTACGAGCTCGCGGCGTTGACCAACGACCTTGACACGCAAACGATAACGACCAAGATCAAGGAGGCCCTCCTGGCGAACAACATTGGCCAAAAGATCTTTGGCGAGGCTGTCCTGGGGCTCTCCCAGGGCTCGGTCAGCGAATTACTCAGCAAGCCGAAGCCCTGGCACATGCTGAGCATCAAGGGCCGCGAGCCGTTCATAAGAATGCAAATGTGGCTCTCGGATCCTCACAACGTCGACAAGCTGCAGGCGTTGAAGAACGAGAGGCGAGAGGCGAACAAGAGGCGCAGGAGCAGCGGCCCCGGACACGACAACAGCTCCGACACGTCGAGCAACGACACGGCCGAGTTTTATCACGCCTCGTCGCCGGGCCCGGGTTTACCCTCGACCAAGAAGCAACGGGTGCTCTTCTCCGAGGAGCAGAAGGAGGCGCTGAGGTTAGCCTTCGCTCTCGATCCTTATCCGAACGTCGCGACGATCGAGTTTCTCGCTGGCGAGCTCGCCCTCTCCTCGAGGACCATCACCAATTGGTTTCACAATCATCGCATGAGGCTGAAGCAGCAAACGCCCCACGGGCAACCCGAGCAACAATCGCCCCGGGAGCCCGGACAGCCCTTTGATCCCGTGCAGTTCAGGCTACTGCTGAATCAGCGCCTCCTGGAGATACACAAGGAGCGCCTGGGAATCGGCAACGTGCCGATACCCTACGGACCCTATTTCAATCCCAACATCGCGACGCTGATGAACAACGCCCTCAAGGAGCAGTGCTCCGGACTCGATCTCTCGATGGGAACGCTCAAGCGAGAGCCGAATCAGGAATTcgaggacgacgacggcgacgacgcGATGAGCAACCTCGGCAGCGAGGATTCCGAGGGTTCGGCCGGCAGCTTGAAGCGCAGCGACACGGCCGACCTGAGCCAGCAGCCCTCGGCGCCGACGACCGCGAGGTCGAATCGTCGGAAACCGGCTGCGCCCCAGTGGGTCAATCCCGAGTGGCAGGAGCCGGCGGCAGCGAGGACCGGCGACGAGGTCATCATCAACGGGGTTTGCGTCATGCAGACGGACGATTACGGCGTCAAGAGGGAAACGGAGGAGACGGTCAGAGTCGAGCCGACACCCGTGCAGGATCGTTACGACGAGGATGCGGCCAGCGACGTCTCCTCCGTTTCGGCGAATAACCCCCAGGATCGCGACAGTCCGATGACCAGCCTCAAATCAGCCCAAAACActccgtcgtcgtcgccgaGACCGCCGTCGTCctcgcagcagcagcagcagcagcagcaaacgATGGAGGAGGAAATTCCAACCAAGGACATAGTGAAAAACGAGCCCGAGGAGTCGTGGGATTATTGA
Protein Sequence
MPDAVYYIDVCISLSPRAPISQLVDEVSRLKQSLQRLQETSSQTTSRLEEELEARRQHISRLEMKLERQRDYDDMKREISIFRSVDLSQIPTGEPGKSLEHLLMERSKALQQQQQAETLKPPSTPDALGGLASPLQRAATASPHALGGGNVVSGGSAPPPPASLLSNTQQAIPTRSTPTPSSAANSTASSILFPPPPPPPPPPLQNVETFGSFLGEEIVANWRRSLERSIMNQQQQTQQQQALSQLQQTQPAVAAAVVAVHQALQQQQQQHAIHSSLNPPTATTTTTTTTTTTNNLNNHHLPSPTDNPSSLASLSSNAPAKCNTPQLGGGGASGLDATEKAPTPIPGHETPAPPTPSSTVALTSPSSIPSGMSLNALQSAHSISSTTTTASTPPTTTPPTTTTTTILDALQHTTNGVTINGMGMLPLMAPTSLPPKSPQDDSCQNNNNNNSHNNNNSHHLTNNNIGGLSLLDSLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKDQGMPAFGRGPQDGGPNDMSDERLAHILSESGHLQMSRSEHETSNDADSKSPSRLGCPSPFGKDRIDNQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPGAMFPHFFSGAQGLQGMERTQEEIRMAFDAYHREFQKLNATQGGQSAAALAGLPGLPNIPGLLALQQQALQQQQQQQQHLAANGGVVQDLSLGKIDPRSKMMNGGVVTDEDKDKMEEAMRHAGSAFSLVRPKQEPSGGGAQSTPGGSSASSPLGNSILPPAMTPNEEFTGAAAASPLQRMASITNSLISQPSTPTHHSTTQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAVAQHQQENQMSLGPPQPSPQHQSHSQQPPQALMLTPPGPHHPHGQFSIQELQKKQQQQVQQQVQQQQQQQQQQQQQQQMSLHSPHQLAPSPLRNLHQHISPSVYELAALTNDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLSDPHNVDKLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGLPSTKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEQQSPREPGQPFDPVQFRLLLNQRLLEIHKERLGIGNVPIPYGPYFNPNIATLMNNALKEQCSGLDLSMGTLKREPNQEFEDDDGDDAMSNLGSEDSEGSAGSLKRSDTADLSQQPSAPTTARSNRRKPAAPQWVNPEWQEPAAARTGDEVIINGVCVMQTDDYGVKRETEETVRVEPTPVQDRYDEDAASDVSSVSANNPQDRDSPMTSLKSAQNTPSSSPRPPSSSQQQQQQQQTMEEEIPTKDIVKNEPEESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00798473;
90% Identity
iTF_00798473;
80% Identity
iTF_00798473;