Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: stc_1
Assembly: GCA_951394025.1
Location: OX596013.1:63494468-63498495[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 2.7e+04 -4.3 1.6 15 19 512 516 511 516 0.81

2 12 0.064 8.6e+02 0.7 0.2 4 10 545 551 544 553 0.95

3 12 1.1e-06 0.014 15.9 14.5 4 19 559 574 557 574 0.91

4 12 0.00016 2.2 9.0 12.2 3 18 612 627 604 628 0.87

5 12 6.7e-05 0.91 10.2 20.5 1 19 668 686 658 686 0.85

6 12 8.8e-05 1.2 9.8 16.7 4 18 734 748 727 749 0.86

7 12 0.033 4.5e+02 1.6 11.5 1 11 789 799 789 810 0.94

8 12 5.4e-10 7.3e-06 26.5 15.5 1 18 816 833 816 834 0.97

9 12 2 2.7e+04 -4.5 14.9 9 18 880 890 867 891 0.81

10 12 1.1e-08 0.00015 22.3 10.7 1 16 927 942 927 950 0.94

11 12 3.6e-07 0.0048 17.5 13.1 1 19 960 979 960 979 0.96

12 12 0.63 8.5e+03 -2.5 0.7 7 12 994 999 988 999 0.68

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	2.7e+04	-4.3	1.6	15	19	512	516	511	516	0.81
2	12	0.064	8.6e+02	0.7	0.2	4	10	545	551	544	553	0.95
3	12	1.1e-06	0.014	15.9	14.5	4	19	559	574	557	574	0.91
4	12	0.00016	2.2	9.0	12.2	3	18	612	627	604	628	0.87
5	12	6.7e-05	0.91	10.2	20.5	1	19	668	686	658	686	0.85
6	12	8.8e-05	1.2	9.8	16.7	4	18	734	748	727	749	0.86
7	12	0.033	4.5e+02	1.6	11.5	1	11	789	799	789	810	0.94
8	12	5.4e-10	7.3e-06	26.5	15.5	1	18	816	833	816	834	0.97
9	12	2	2.7e+04	-4.5	14.9	9	18	880	890	867	891	0.81
10	12	1.1e-08	0.00015	22.3	10.7	1	16	927	942	927	950	0.94
11	12	3.6e-07	0.0048	17.5	13.1	1	19	960	979	960	979	0.96
12	12	0.63	8.5e+03	-2.5	0.7	7	12	994	999	988	999	0.68

Sequence Information

Coding Sequence: ATGTCTCGGAAGCTCAACTCGGAAGCTCAACTCTGGCAAAGTAGTGATGAggtcaaaaacatttctacaGTCGGCGGTGCGCAATCAACGTATAACAACAACTACGTAAATTTCAATCAGTTCATCATGCAGCACAATCTTCACGGTGGCGATGCCTCCACCACTCCTTCCTCCAACTGCGAATCTTTACATCGCGTTTCCTCCACGTTTGGTAATGTTGCTGATGGTGAGAACTACCTTGGTTTCGGGCAAACTTCTGCGAATAAATCTTCCAACGGCTTGGACAATTACCAGCAACAGCAAACacattttttcaataccaattccaattccaatCTATTTCAATATAACATTGATTCCAATGCATCCGGCGTATTCACGAACGGTCAGAATAATTTCAATAAGACAGCAACAACGAGTCCCGATTACTATGATAACATATACACACCGTTCGGCAACAGCAGCACCACATACTTTGCGAATCCCTTTGCGACTGGCTTTGATTTTAGTGCGTCGAACTTGCACGCCACTGCGCCGGAGTTTGTGCCACGTTTCAATAACCTTTCGCTGGGCGAAACCGCAAATGGCAACACACCGACACCGATACCACAGCACCTCAAAACTTCTTTGAGTCACGTTGGTTCTTCTATGCAAAGAAATGACAAAATCTCAATCAGTTTCGAGGATGAAGCAGCTCGTGGGTCAAAGGAGGCCTACGAATGCAAAATCAACAAGTCATCCCCAACCGTTACTAACTTCGAAATGACTTCGAAATTATCAGGGCCATTGAAAAACGCAGATAATGCGGCGTCTTCGTCCTCGTCCTCACCTTCCGCTTCATCGGGTGGTCTGGTTGGGCCGCGTTTAACAGGAGCTAAAAACAAAACTTCGTCACGTTCGGAAATGCCGCGTTCCACTTCGTCTAATAACTCCGGCAGCCACTCTAGCAACGTTTCCTCGGCACGTGCCGAACGCGAGCGAGAACGCGATAATCGTCGCTATCAAAATGGTCGCCGTTCGGTGGCTGATATTCCAGAGCGTGAAGCTCCTCGTTATGAACGAGGGGAACGTGGGGCAGATCGATATGAGCGAGCAGAGAGGGGCGATCGCGGGGAGCGTGGTGACCGTGGTGACCGCGGCCACGGACATCGGGGTAACCGCGATCGTGATTATCACCAGCGCTATGAGAATCATCGTAGCAATAAGCGCCGCGATGATTGGAATCGTAATCGTGATCGCATCAACGGATTCCGTGTCGAGGAGAAGTACTCTAGCGAGAATGGCAAAGACAGTCCGCTGCCATCGCCGGAAAAGAAATCTTCACCAAAGAAAATTTATCCCGAAAATGAGAAGTTGTCCCAACGTGAAAAGCTAATACGCGATATAGAGCTGCGAAGACTAGAATGTCTCGTTTGTGTTGAGCCCATCAAGGCACACCATTCCGTTTGGTCGTGCAACAATTGCTATCATATACTACATCTGCAATGCATCATAAAGTGGGCCTCCTCGTCCAAATCGGATGATGGCTGGCGTTGTCCCGCCTGTCAGAATGTGGTGAAGGAAGTTCCACGTGACTACACTTGCTTCTGCAGCAAAGTAAAGAATCCAACCTACAATCGCCAGGACATTGCACACTCGTGCGGCGAAGTGTGTGGCCGCGTTGAAGGCTGTGCGCATGCGTGCACTCTGCTCTGCCACCCCGGGCCGTGTCCGCCATGTCAGGCGAATGTGAAGCGCGAGTGTGGCTGCGGTAAGACCACAAAAACAATGCAATGTTGTCTGAAAGAGGCCATTGCATGCGATTCTATTTGCGGCAAAATGCTGAATTGTGAATTGCACACGTGCAGTTATCAGTGCCACGGCGGAAAATGTGCTCCGTGCGCCGACAAAGTCGATCAGCAGTGCCACTGCTCGAAGCAAGATCGCCAAGTGGCATGCACTCGCGACTCGCACGATAAGCACACGTTCTCGTGCGGCAAACCATGCGGCAAGGATTTGTCTTGCGAAAATCACAAATGCAAGGACTGCTGTCATGCTGGCGACTGTCGCCCGTGCAAGCTTAGCCCGGAAATGGTTACATCGTGTCCATGCGGCAAGATGCCGCTGGTCCAGGGACAGCGAAGTTCCTGCTTAGATTTGATCCCAGTGTGTGAAGGTGTTTGCAGCAAGACGCTGCGTTGTGGGAAATCAGCACATCCCCACCACTGCACCAGCAAATGCCACCTTGGCAATTGCCCGCCGTGCAACAAGCAAACAGCAGTCAAGTGTCGTTGCGGCCACATGGACCAAATGATAAAATGCCGCCAACTATCTACACGCGCCGACGACGCCCGCTGCAAGAAGCGTTGTGTGAAGAAGCGCACGTGCGGCAAGCATAAGTGTAACCAAGAATGCTGCATCGATATCGATCATATCTGCCCACTGCCCTGTAACTATACACTCTCATGCGGCAAGCACAAATGCGACCAGCCGTGTCATCGCGGAAATTGCCCACCTTGCTATCGCTCCTCTTTCGAGGAGTTGTATTGCGAATGTGGAGCAGAGGTGATCTACCCGCCGGTGGCCTGCGGTACGAAGCGCCCGATATGCAAGAGGCCATGCTCCCGACAGCACCCCTGTGACCATCCGCCGCAACACAACTGCCATTCGGCGGGAAGCTGCCCGCCTTGCATGATATTCACCACCAAATGGTGTTTTGGCCAACACGAACAACGTAAAACCATTCCATGTTCACAGGATAGCTTCAGCTGCGGCCTTGCCTGTAATAAGCCACTGCCGTGCGGGCGGCACAAGTGCATCAAGCCGTGTCATGAGGGCAACTGCCAAGCGACTGCCGGCGAAATTTGCAAACAGAATTGCACAACGCTGCGTGCTACTTGTGGTCACAGGTGTATGAGCACATGCCACAACGGCGACTGCCCGGAGACGCCCTGCAAAGAAATGGTTGAAGTTCAGTGCGAGTGTGGCAATCGTAAACAGCAGCGTTCGTGCCATGACTTGTCGCGTGAATATAGTCGCATTGCAACTGCACAACTGGCCTCGTCAATGGCGGAAATGCAACGTGGCAACTACATGGAGCTGAGTGAAATTTTAGCGCCCGTCAAAGCTaataaaaccaacaaaacCCTCGATTGTAACGAAGAATGTCGCCTACTCGAACGTAATCGTCGTCTCGCGATTGGTCTACAAATACGTAATCCCGATTTGCCACAGAAGCTCTTGACCAAATATTCAGATTTCATACGCAACTTTGGCAAGCGTGATCCGGCCCTGGTCAAGTCCATACACGATTCCCTCACCACTTTGGTCAAATTGGCCAAGGAGAGTAAACAGAAGTCGCGCAGTCACTCCTTTCCGACAATGAATCGGGAGAAACGGCAGTTGGTGCACGAGATGTGCGAAATGTTCGGGGTCGAGTCTGTAGCTTACGATGCTGAACCGAATCGCAATGTCGTTGCCACGGCTTATAAGGATAGGTCCTGGCTACCAGCGTCCAGCATCATAGACGTTATGCAGCGAGAGTCTGGACAGCGCCGTGTGCCTGTCCCAAGCAACAATTCATGGGGGGGCATTAAAAGATAG
Protein Sequence: MSRKLNSEAQLWQSSDEVKNISTVGGAQSTYNNNYVNFNQFIMQHNLHGGDASTTPSSNCESLHRVSSTFGNVADGENYLGFGQTSANKSSNGLDNYQQQQTHFFNTNSNSNLFQYNIDSNASGVFTNGQNNFNKTATTSPDYYDNIYTPFGNSSTTYFANPFATGFDFSASNLHATAPEFVPRFNNLSLGETANGNTPTPIPQHLKTSLSHVGSSMQRNDKISISFEDEAARGSKEAYECKINKSSPTVTNFEMTSKLSGPLKNADNAASSSSSSPSASSGGLVGPRLTGAKNKTSSRSEMPRSTSSNNSGSHSSNVSSARAERERERDNRRYQNGRRSVADIPEREAPRYERGERGADRYERAERGDRGERGDRGDRGHGHRGNRDRDYHQRYENHRSNKRRDDWNRNRDRINGFRVEEKYSSENGKDSPLPSPEKKSSPKKIYPENEKLSQREKLIRDIELRRLECLVCVEPIKAHHSVWSCNNCYHILHLQCIIKWASSSKSDDGWRCPACQNVVKEVPRDYTCFCSKVKNPTYNRQDIAHSCGEVCGRVEGCAHACTLLCHPGPCPPCQANVKRECGCGKTTKTMQCCLKEAIACDSICGKMLNCELHTCSYQCHGGKCAPCADKVDQQCHCSKQDRQVACTRDSHDKHTFSCGKPCGKDLSCENHKCKDCCHAGDCRPCKLSPEMVTSCPCGKMPLVQGQRSSCLDLIPVCEGVCSKTLRCGKSAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRTCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVACGTKRPICKRPCSRQHPCDHPPQHNCHSAGSCPPCMIFTTKWCFGQHEQRKTIPCSQDSFSCGLACNKPLPCGRHKCIKPCHEGNCQATAGEICKQNCTTLRATCGHRCMSTCHNGDCPETPCKEMVEVQCECGNRKQQRSCHDLSREYSRIATAQLASSMAEMQRGNYMELSEILAPVKANKTNKTLDCNEECRLLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRNFGKRDPALVKSIHDSLTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPASSIIDVMQRESGQRRVPVPSNNSWGGIKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -