Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: -
Assembly: GCA_951394025.1
Location: OX596012.1:47467924-47475979[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.15 12 7.1 0.5 1 23 1546 1569 1546 1569 0.94

2 13 0.71 57 5.0 1.1 1 23 1728 1750 1728 1750 0.94

3 13 0.00067 0.054 14.5 2.8 2 23 1753 1774 1753 1774 0.97

4 13 2.6e-05 0.0021 19.0 0.2 3 23 1782 1802 1780 1802 0.98

5 13 9.8e-07 7.9e-05 23.5 3.6 2 23 1809 1830 1808 1830 0.97

6 13 7.8 6.2e+02 1.8 0.4 5 23 1843 1861 1841 1861 0.96

7 13 8.4 6.7e+02 1.7 7.6 3 23 1868 1889 1866 1889 0.93

8 13 0.1 8.2 7.7 0.5 2 23 1900 1920 1899 1920 0.96

9 13 2.8e-05 0.0023 18.9 0.8 1 19 1926 1944 1926 1948 0.94

10 13 8.1e-06 0.00066 20.6 1.2 1 23 1956 1978 1956 1978 0.98

11 13 0.00015 0.012 16.6 7.6 1 23 1984 2006 1984 2007 0.96

12 13 0.0017 0.14 13.3 6.7 1 23 2012 2034 2012 2034 0.98

13 13 0.0024 0.19 12.8 6.0 1 23 2040 2062 2040 2063 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.15	12	7.1	0.5	1	23	1546	1569	1546	1569	0.94
2	13	0.71	57	5.0	1.1	1	23	1728	1750	1728	1750	0.94
3	13	0.00067	0.054	14.5	2.8	2	23	1753	1774	1753	1774	0.97
4	13	2.6e-05	0.0021	19.0	0.2	3	23	1782	1802	1780	1802	0.98
5	13	9.8e-07	7.9e-05	23.5	3.6	2	23	1809	1830	1808	1830	0.97
6	13	7.8	6.2e+02	1.8	0.4	5	23	1843	1861	1841	1861	0.96
7	13	8.4	6.7e+02	1.7	7.6	3	23	1868	1889	1866	1889	0.93
8	13	0.1	8.2	7.7	0.5	2	23	1900	1920	1899	1920	0.96
9	13	2.8e-05	0.0023	18.9	0.8	1	19	1926	1944	1926	1948	0.94
10	13	8.1e-06	0.00066	20.6	1.2	1	23	1956	1978	1956	1978	0.98
11	13	0.00015	0.012	16.6	7.6	1	23	1984	2006	1984	2007	0.96
12	13	0.0017	0.14	13.3	6.7	1	23	2012	2034	2012	2034	0.98
13	13	0.0024	0.19	12.8	6.0	1	23	2040	2062	2040	2063	0.96

Sequence Information

Coding Sequence: ATGGTGGAGAACGTGCAGTGCCCTGTGTGCACGCTCTTCCTGCATGCGGGAATGAACCTTTCGGATCATTTGGAAACGCATCCCAAAGAACAAGTGATTAAAGCTCTTGTGCAAATGACCATCACGGGTGGACCGGTCAGCGGTGTACTAGCAGCTGCATGCGCTATCGACAAGAAGCTGGAGAGCGATGCAAAAACTCCCGAAAAGGAGCAAGATCTGAGTAGCAATTCGGCGAGCAACTCATCCTCATCTTTAGGCTCATCAACCTGTTCCTCAAATAATAGTCTTAATTTTGCGAGAACTTTTCCcccaacaaccacaacagcaacaactactACAGCAGTGAAACCGCAGAAGCAAGCCACTGCTACTGAAGCGATCACGTCTCCCACTTCCAGTGGCAATGGTAGCAACGTTGTCGTCGGTGGTAccaatatttttattcagcAACAAACCGCAACTGCGACACAAGCATATCAGCGTAGTGGCAGCAATGTATCATcaggagcagcagcagcagtccTTGTGAACGGCTTGAATGAAGCGCCAGGGATGCCAACTGATTTCAGCGCCTTTGCGGCAAATCGttatcagcaacaacaacatgcatCAACAAGTCAATTACAGCAGCAGCCGTCTCAGCAGCACGTATCCGTGGCACATCAACATCGTGCAACATTACCACCGCCGCCACCGCCGTTACCATCTCAGCCAACTTCGCAGTTGTCAACGTCATTTCAActgctgcaacaacaacaactcgcGCCACACCCAGCAACTACAGCACACCGTCATCAACAGTTGTCGcaacaccaccaacaacaacagcagcagcagcaacaacaacaacaacagcagcaaacaTTAAAGAATATTTACTCATCGGCTttgccgccaccaccaccttTGCAGTTGTTCACCTATCAGCCACAACCACAGCCGCAACATCAAAAACCACCGCCTGCCTATGGCACCGCAATTAGTCAAATTCGATCTCAgcaccaaaaccaaaataaacaagCTGCAATGCCCGCGCAACAGATGCGTGTGGCACTGACGCCCGTTGAAGTACCCGCGTCGAAGCATATGTTCCAAGATAAACAAATTGAACTACCCCCTCCGCCACCTCCGCCACCCGCAACACCACCCGCCTCAGCTACTCATCATCATAAGTATCTGAATGAAGCTGCTCCGCAAAGTCACAATCAGCACGAGCATTACGTAAGCCACATTTCCAATGctgccaccaacaacaacaacaacaagccatCCAATATAGTCGCAGCACAGTCGCCTCCTCCCTCAGCGGCATCACAAATCCAGTCCCTTTCTGTGGCTACACCTTCGTCATCGTCGTCCGGTTCCAACAATCGACAAACCAACTCACCGTTCTCCACTTTACTAGCCGCAGCTGCCCAGTCGCCATCTTCAGTTCTGCGTTTCGCCGAATCCCCAGTGGCACACTATCTGGAACGCGACAACGGCGACTTTATAGTACAGGAAACGCCCAAGCATATTGTGGAGTGCGTCGAAAAAGACAATGGTGAATTTTCAGTGATTGAGCGCATCTATCAGTCGCCTCCGAGTGTGCTCCACATACACGATGACGATGAAGATGACGAAGATGAGGAGGAACAGAAGCCGGACGATTCAGCCACACACCCGCCCAATGTTGAGGACGGTAAGAACGGTGCTGTGGCAGCCACTGCAACAACGGACGAAGATGAAGAGGAATTCATGAGCATTACGAGTGAAAGTGATGAGGATGATGTAGtgattgaaaaattcaaaaaggatgAGGGCAGCAGGAAACCTTCGACCGAAGCTACCAACTTTAACCTGGAACCTTCTACTAGTACCGTTGCTGTTCCTGCGGCACCTAGTGTGGGCAATTTCAGCGGCTGTTCcaattcaaatacaaatgcaaatgccACCACTTCGACTGGTACTACGACACGCAAGAAATCTTCGAAAAATACCATAACTGTGCTCAGCGATGTGCAGCTAAATCTCAACGAATATTTGGATTTGGTCGGCAATATTATCGCATCAAGTAAAATTGCTGCACAACGTACAGCATTCGGAGCTGCAGCAGCCCCGATTCCCCTACTGAAAGTCGAAAAAGTTGAACCGCCCGACGAGTATGACATGCAACAAGACCAACAAGAGTTAGATAGCCAATCGGAGGAGAATGGATCAGAAGAAGAAggagcagcaacagcagcagcagtagtaCCGACAACGGAACCACCTACACCAATCGCCAACAAAAATGAGACTGAAGAATTAGTTGAAAATAATTGTAACAATAAGACTAGCTTAAATGAAAACGACGAAAAACCCACAATAGCACGCCAGGAGGGCAGCCGAGAAGTACATGCAGCAATCGAACAGCAAGTGGTTGCATCCACATGTTCGAGTCAAGTTACAAGCGTTATACGTATGGCAACAActagccaacaacaacagccacaacacCAACCTTCTGCAGAAAATCTCGAAtatttaggattttttttcccacATACACAACACCTAACAGCAGCGGCAAATCACAATAAAGAATTAGTAAGAAGGGAAGAGAATGTGGCCCAAGATTTATCTCGGCCGCAGCTAAAAATGGAACCACaagaacaacagcaacagcagcaggtCAACGTAGTTGAGGAAAGCTTGTTGCCACAAAAGGCGATtccgccaccgccaccgctGAAGAAGGGTCCAAAGAAGCTTGTCATTAAACCCAAATCAACTAAGACTGATGGAAACGCCAACAGAAGTGTCGCACCGGAAAAAGTACCTTGTTCCTCCTCCTGCACCACCTCCACCTCCATCGCCATCGCTCTCGATGAGCATGATCATGATCAACCATCAACATCGGCAATGGCGCAAATACAACAATCGGGTAAAAATAATGACCGGCACCTGCATGATACTGCCCAAATGTCGCAAAATGTCGTCATCAAAAGTGAATTGAAAAGTGAACCAAGTCAGGGGTCATACGAGAGCGGCGGAAGCATCCTGGAGCAGCATTTGAAGTTGGGTGCCCAACGAATTGAATGCAAGAAAGAGCAACCCTTTTTGCCAGAAAGCCACACGCTACACCACGATAAGGTTGAAGCGCGTTCGCAGATGAAAGTCGAAAAAGAATGCCATGAAATCGTTGTGTTGCAGTCGAACGAAAATGTTGCAGACGATGCACGCGTATTGCTCGATTTTGCCAATTCGAAGAAACACATTGCCGCCACCGCATCCACCAGTGCCTCGGCGACTTTTCTTTCTTCCAGTTCGATTTTTTCCAACTCAATTGCCGCTACTGCTGCATCGGAAACGTCAACAACTGCCGTGGCCAGCACTCACTCGCTCCGTTGTGATGATGAATTTATCGTTCCCGACGCCAATGATGTTGTGCAAGAGATCGTAATATCGTCCTCATATTCCTCACAGTCGGCATCAGATGTGGCTCTAAAGCATACTACTGTCGGCTCcacagctgctgctgctgccaatGAGgagcaacaacatcaacaacaacacacgTTTACAGATTATCCATTCAGTTTTCTATATGGTGGCGGCAATGTGGCTCAGCCAGTCGAGACCAATGGCAGCTTCTCGCCGTTGTACCAACAGGCCCACGATGCCACTACAGCAGCAACACTGGCCTCGGGCAGCAATTCTGCCACCATCGAAGATTCGACATCTGCTCATGCTTCGCATCAGCAGCAGCCAAATCGCTTCGGTACCGCTGCGCAAAGCGCTGTCTCACAATGGTACCATCATACAGCCTCTGCGGCGAATTCCGATTTCGAGGCTGCTTTCGCTGTTGACTGCAGTGCTGCTGTGGATGGCGACGTCAGCAAGTACCTTGATTTGGATGCTTGCAAGCGTGAGAGTATCGTTGGTTTGCAGGTGGCTCGATCGTCCACTTCGTCCTCGTTTACTGCTGCCACTGAGAGCAGTTTGGCAGGCGGCTGCACCACGGACGCATTAAATATACGCACCGATGAGAAAATGCCTGCCAAAGGCGAGATTTCCGAACAGGAGAGCAATTGCGATATAGAGAATTCATGGAGCCAACCGATGTATGGCGATATTTCGGCACGCTTCTTCAAGACTTCATTTCCTGGAATATTCCAACAAGAAAATGGCTGGAACCACGATGAGTATTTCTCTGTGCAGGATCTGAGCGCCTCGACGACTGCTACTGCTTCGGCTAATGCGGACAACAGGCCAACCAAGAGCTTTGACTTCCGTCTTCCTCTGGAAGCAACTACCTCAGCCACAGCGATCGGCAACACCAGCAACAATTTACAACTATTTCCGCAACATCATGCCGATGCGATTCCCTCGACATCGGCGAACAAAAAGAAACGCAAACGCGACATCAACAACGACAATGCGACAATCACGCGCGTGCAACCAACAGCCACGATCACATCGCAGCAATTGCTTCTGCATCATATGCAGACATTGCAGCAATATCCACATCAGCCGCACATACAgctgcaacagcaacagcagcagcaacaacaacagcacaacCAACCTACTACATCGGCAGCATTGCTGGCAGGACCATCAACTGCTGCCGCAGCCAGTGCCGCGTTGCAGCAGAAGGTGCGCAAAAAGATTTATCAGTGCGCCCATTGCACTGCCGAGTTTCCCAAACTCAAGGATCGCAATTCGCATATGATTGCCGAACACAACTATGTGCGCCAGAATCGCCGTCTGATTTGTTCGCAGACGACAAGCGGCGCTGGCACCACCACAGCAACAATAACTACAGCCGATCTGGCAGCGGCGGGCACTTCCAGCGCGACCATCTTGGTGCACACACAAAGTGGTGAAATCGTTGAGGATTCGAAGCAGGGCATAGTCAAAATCGAAATAGACAATTTGGAACAACCATTAGCGATGACAATCAATGAAGGCGTCGACGCCAAAACAGAACTCATCGACGATAAGGACAGTTTGGCCCTGGTGCCGGCCAATGGCTCTGCGTCAATTTCCGCCGCCTCTGGCGATGAGGCTAAGTCCAATTTGCACCTCTTATCGATCAGCACGCCTGCGACCAAATTGGCCACTTTGTATCGCATGCTGGTTTCCTACAATATTTCGACGTTGAAGCAGCACCAGAACTTGACGGAATTCGAGGAGAAACTCATTGAGACTTCGATATTCTTTTGCTACGTTTGCCGGCGCAATTTCAGTTCGGTCAAATTGTACGACGCCCATCTTACGGAGCATCCAGCCGAGTGCTTTACCTGCGGTAAGAAGTTTCAGCGCTGGAAGAACTTCTCGCTTCATCTAAAGCGCCACCTGGGCTGGAAGGAATTCGGTTGCAATGTGTGCGACAAGAAGTTCGTTGTTCGCAGCGCATTGGTTGAGCACATGCGCATGCATACCGGACAGACGCCGCTTAAGTGTAAAATTTGTGGTAAAAACTTCAAACGTTACTCGAACCTTACGCAACATCGCAAACGTCATGGCAAGCAAATCATACGGAAAAAGGAGTACGTCTGCCATTGCGGCGAAGTGCTGCCTTCCAAGGCACGCTTCTTATGGCACAAAGAGACGCACGATTCCAAGCCGAAATGCTGCCCACACTGCTGTGATCGCTTCGTCCATGCCAATTCGTTGCGCCGGCACATTCGGCTGGCGCACTCCGACAAATTCGACTACACCGAACCCATGGAGTGTCCCATGTGCAAGCATATTTTCGCCAAGTCCTCAATCAAGGCACACATGGCCACACACTCGATGGACACACAACACGATTGCCCCATATGCAACAAATCATTCTCCACCAAATGGAATCTGAAGATACATTCGTGGGTACACGCCAATCGCACCGCCAAGCCCTTCAAGTGCGAACACTGCCCGAAGGCATTCGTGCGCGAGGTGGACTTTAAGAATCACATGAACGCCCACAAACAGATCAAACCGTACACGTGCGAGTACTGCGGCTGCAAATTCATACGAAAATACAATTACATGCGACATCGGCGCGAGCATCACGGCCACAAGAAGTTCACCTGTGATCTGTGCAAGAAAACCTTCCACCGGCACTACTATCTCATCGAGCATCGGCGCATACACACCGGCGAGCGACCGTTCCAGTGCACGATTTGCGGCAAAAGTTCCACAACGAAGACGAACCACAACAAGCATCTGAAAATACACCATTCGCGCGATCCATTTACCGTGGAGGCGTAA
Protein Sequence: MVENVQCPVCTLFLHAGMNLSDHLETHPKEQVIKALVQMTITGGPVSGVLAAACAIDKKLESDAKTPEKEQDLSSNSASNSSSSLGSSTCSSNNSLNFARTFPPTTTTATTTTAVKPQKQATATEAITSPTSSGNGSNVVVGGTNIFIQQQTATATQAYQRSGSNVSSGAAAAVLVNGLNEAPGMPTDFSAFAANRYQQQQHASTSQLQQQPSQQHVSVAHQHRATLPPPPPPLPSQPTSQLSTSFQLLQQQQLAPHPATTAHRHQQLSQHHQQQQQQQQQQQQQQQTLKNIYSSALPPPPPLQLFTYQPQPQPQHQKPPPAYGTAISQIRSQHQNQNKQAAMPAQQMRVALTPVEVPASKHMFQDKQIELPPPPPPPPATPPASATHHHKYLNEAAPQSHNQHEHYVSHISNAATNNNNNKPSNIVAAQSPPPSAASQIQSLSVATPSSSSSGSNNRQTNSPFSTLLAAAAQSPSSVLRFAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLHIHDDDEDDEDEEEQKPDDSATHPPNVEDGKNGAVAATATTDEDEEEFMSITSESDEDDVVIEKFKKDEGSRKPSTEATNFNLEPSTSTVAVPAAPSVGNFSGCSNSNTNANATTSTGTTTRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKIAAQRTAFGAAAAPIPLLKVEKVEPPDEYDMQQDQQELDSQSEENGSEEEGAATAAAVVPTTEPPTPIANKNETEELVENNCNNKTSLNENDEKPTIARQEGSREVHAAIEQQVVASTCSSQVTSVIRMATTSQQQQPQHQPSAENLEYLGFFFPHTQHLTAAANHNKELVRREENVAQDLSRPQLKMEPQEQQQQQQVNVVEESLLPQKAIPPPPPLKKGPKKLVIKPKSTKTDGNANRSVAPEKVPCSSSCTTSTSIAIALDEHDHDQPSTSAMAQIQQSGKNNDRHLHDTAQMSQNVVIKSELKSEPSQGSYESGGSILEQHLKLGAQRIECKKEQPFLPESHTLHHDKVEARSQMKVEKECHEIVVLQSNENVADDARVLLDFANSKKHIAATASTSASATFLSSSSIFSNSIAATAASETSTTAVASTHSLRCDDEFIVPDANDVVQEIVISSSYSSQSASDVALKHTTVGSTAAAAANEEQQHQQQHTFTDYPFSFLYGGGNVAQPVETNGSFSPLYQQAHDATTAATLASGSNSATIEDSTSAHASHQQQPNRFGTAAQSAVSQWYHHTASAANSDFEAAFAVDCSAAVDGDVSKYLDLDACKRESIVGLQVARSSTSSSFTAATESSLAGGCTTDALNIRTDEKMPAKGEISEQESNCDIENSWSQPMYGDISARFFKTSFPGIFQQENGWNHDEYFSVQDLSASTTATASANADNRPTKSFDFRLPLEATTSATAIGNTSNNLQLFPQHHADAIPSTSANKKKRKRDINNDNATITRVQPTATITSQQLLLHHMQTLQQYPHQPHIQLQQQQQQQQQQHNQPTTSAALLAGPSTAAAASAALQQKVRKKIYQCAHCTAEFPKLKDRNSHMIAEHNYVRQNRRLICSQTTSGAGTTTATITTADLAAAGTSSATILVHTQSGEIVEDSKQGIVKIEIDNLEQPLAMTINEGVDAKTELIDDKDSLALVPANGSASISAASGDEAKSNLHLLSISTPATKLATLYRMLVSYNISTLKQHQNLTEFEEKLIETSIFFCYVCRRNFSSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCNVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKNFKRYSNLTQHRKRHGKQIIRKKEYVCHCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKHIFAKSSIKAHMATHSMDTQHDCPICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGHKKFTCDLCKKTFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -