Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: L_1
Assembly: GCA_951394025.1
Location: OX596011.1:84150525-84156109[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.1e-06 0.00057 20.8 1.7 1 23 171 193 171 193 0.98

2 19 0.59 47 5.3 5.8 1 23 199 221 199 221 0.98

3 19 3.1e-07 2.5e-05 25.1 3.1 1 23 227 249 227 249 0.99

4 19 1.4e-05 0.0011 19.8 0.3 1 23 255 277 255 277 0.98

5 19 2.2 1.7e+02 3.5 0.2 3 23 341 363 339 363 0.79

6 19 0.0046 0.37 11.9 0.2 3 23 392 413 390 413 0.96

7 19 0.083 6.7 7.9 0.7 1 23 507 529 507 529 0.97

8 19 0.0023 0.18 12.9 0.5 2 23 537 558 536 558 0.94

9 19 0.00075 0.061 14.4 0.3 1 23 566 589 566 589 0.93

10 19 1.1 89 4.4 0.1 1 19 594 612 594 614 0.93

11 19 2.3 1.8e+02 3.4 0.1 2 23 625 647 624 647 0.94

12 19 0.0034 0.28 12.3 1.1 1 23 687 710 687 710 0.97

13 19 1.7 1.4e+02 3.8 1.6 1 23 884 908 884 908 0.89

14 19 0.0065 0.53 11.4 4.7 2 23 917 939 916 939 0.96

15 19 0.15 12 7.1 0.1 1 23 945 967 945 967 0.92

16 19 0.64 51 5.2 0.3 2 23 975 996 974 996 0.95

17 19 1.3 1e+02 4.2 2.5 2 23 1090 1111 1090 1111 0.94

18 19 0.026 2.1 9.6 0.0 1 23 1121 1143 1121 1143 0.96

19 19 0.51 41 5.5 1.3 1 23 1150 1172 1150 1172 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.1e-06	0.00057	20.8	1.7	1	23	171	193	171	193	0.98
2	19	0.59	47	5.3	5.8	1	23	199	221	199	221	0.98
3	19	3.1e-07	2.5e-05	25.1	3.1	1	23	227	249	227	249	0.99
4	19	1.4e-05	0.0011	19.8	0.3	1	23	255	277	255	277	0.98
5	19	2.2	1.7e+02	3.5	0.2	3	23	341	363	339	363	0.79
6	19	0.0046	0.37	11.9	0.2	3	23	392	413	390	413	0.96
7	19	0.083	6.7	7.9	0.7	1	23	507	529	507	529	0.97
8	19	0.0023	0.18	12.9	0.5	2	23	537	558	536	558	0.94
9	19	0.00075	0.061	14.4	0.3	1	23	566	589	566	589	0.93
10	19	1.1	89	4.4	0.1	1	19	594	612	594	614	0.93
11	19	2.3	1.8e+02	3.4	0.1	2	23	625	647	624	647	0.94
12	19	0.0034	0.28	12.3	1.1	1	23	687	710	687	710	0.97
13	19	1.7	1.4e+02	3.8	1.6	1	23	884	908	884	908	0.89
14	19	0.0065	0.53	11.4	4.7	2	23	917	939	916	939	0.96
15	19	0.15	12	7.1	0.1	1	23	945	967	945	967	0.92
16	19	0.64	51	5.2	0.3	2	23	975	996	974	996	0.95
17	19	1.3	1e+02	4.2	2.5	2	23	1090	1111	1090	1111	0.94
18	19	0.026	2.1	9.6	0.0	1	23	1121	1143	1121	1143	0.96
19	19	0.51	41	5.5	1.3	1	23	1150	1172	1150	1172	0.93

Sequence Information

Coding Sequence: ATGTACTCCACGCACACTTCCTCCAGTTATTCGCCTTCTATATCCGATGGCACCATCACACCCAACTCACTGCATCACCATCCCCAGCTTCAGCAGCACTTGCCTTCGCATCACCACTTGCAACATCTGCAGGGTCTACACCAGCAGCACGATGAAGGCGGCTCACAGACACACTGTCTGCGTAGGCATGCGGCGTCTTCTAAAACCAACGGTGTTGTAAATGTTGAGGGCGCTGAAAATGACAACGACCGAGACGGCGACcatgacgacgatgacgaaCCGACATATGACAAAAATGGCGCTGAATCGAGGACAACAAAAAGCCACGGCAGTGCAGCGGCGAATGGCAATGCCAACACTTTGGAACTGAAACGACAGGGTCGGCACCATCGTCATGTCGAGCATGGAGCGACAATGAAAATTCCAACGAAATTACGGAAAATCGATAGGGATGCCGGCAAGTTTGATAAGTTGACAGGAGAAGGCATTAAGAGCAGCGCCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTTGGCTACTTAAAAAAGCACGAGCAGAGCCACGCTGAACATCTTCCTTTCAAATGCGATTACTGCGCCCGACTCTTCAAGCATAAGCGTTCAAGAGACCGTCATACCAAATTGCATACCGGTGATCGTCGTTACAGGTGTCCGCACTGCGAGGCAGCGTTTTCAAGAAGTGACCATCTGAAAATCCACATGAAGACGCACGACAAtcagaaaccctttcagtgcACGATTTGCAATAGGGGCTACAACACTGCAGCCGCTTTAACCTCACATATGCAGAATCACAAAAAGCAGGCGGCCATTCTTGCCGCTGGCGGTAATCCCCAAGCTCTGAATTACAGTCCACGTTCAACTGGTTCTGCCTCGAGTAATGGCAGCTTGCAAAAGCGTCGCTATGCCATGGCCACCATTGCCTCGGACAGTAGTCCCAGTCGCTTGGAGTATCCTAAGCGCATGCGAGTGTCCTTTTTGAATTGCAGCTTCTGTACGAAAGGCGATTTCAATACATTAGAGCAGTTGAATGCACACATTCAGGCTATGCACGAGAAGGAGTTGCAGCCAGTGGGCAATCCACAATCACTGAATGCAGGTGAAACCAGTGTCAGTGTCAATGCATTTCAACTTGCCTGTGAGTATTGCACCATGAAGTTTCCCAATATACCGGCCATGTTTCAACACATGCGAACGACGCACATCGATCGCCTGACCAGTCCGAATTCGTATTTTGAGCATTTCAATCGATTGGCCGCTTCGGGCACTTTTAGTCCCCGTTTGGTATCGACTAAATCTCTGCAGCGCAACGACACCGAGGAGAATATCATTAAAGTGGAACAAATTATTGGCAGCCCTAAGAGCAGCGATGCCAAGCAGGAGGAAGAGCCCACCGATTTGAGTCAGAACAAGCGTCGTTCCGAGACGCCCAACCACTCGCAACAAGCTTCGCCGCAGATGGCCCCAGAGAAGCCAGGCGTATTCTTTTGCAATCAATGCAATGCGGGCTTGCCAGACTTTGAGAGTTTTCGTAATCATCTCAAATCGCACATAGCCCAGGGACTCAATCTTGTGTGCCATCATTGCGGCCTGTCTCTGCGCGACCAGCCTGAGTACGAACGTCATGTCATAGCTCATTTTCTCATCGCCAACTCGGAGTATAACTGTGCTAGCTGCAACAAGACCTATGCCAAGCCCGAGGAGCTACAGAAACATCTTTTGGACTCACATGTTGTAACCATGTACAAGTGTTCTTTGTGCTCGGAGTTGTTCGATTCGAAGGTGGCTATCCAAGTGCATTTCGCATGCGCTCACTCGGTGGAAACGAAATTGCTGAGATGCTCTGCCTGCATGGAGGTATTCCGTGCTGAAGCCGATTTCAATATACATGTGAAGACGCGCCATCAGACCGCCAACGGCAATCAGAGCAATTCAAACACTTCCTTGCAGTGCATGTTCTGTCGCACTGTGTGCTCGTCGGATCTTGAGATGCACTTCCATTTGGCCGCCCACGCGCGACAGTTCCGTTGTCCGTCGTGTCCCGAAACGTTCCATGTTGAATTCTTGCTCGATCGTCATATGCAAAGTCAACACGGCGGCAATGAGCGGGCTCCAGTTAATCCGAACAAGGAGCAGCCGCCAACATCATTTGAAGAGCATGCTCCCAACTCAGGGCCACATAATGCAATGAGTCCAATGAATTCCCTGTACGTCAATGCTCTATTTGGCAAGGCTCCTCTAATGCCGCTGGCTGcacagaacaacaacaacagcatacTTGATTATAATGTGGCCTTTGCAGCGGCTCACCTTAATAAGGGCCTTTTTCCAAATGCAGCAGCCGCTGCAGCGGCCGCAGGAAAGTTCTACAGTCCCCTTCAGGTGGACACAAGCGCCATGAAGCATCCGACGCTAATGTATGGTCTGAGTCAGCGCTACTTCGACACCAATCGCACTTTGATGGACATGTATGCACAGCATCAGCAGGACAAGGCTGCGGCGGCGGCGGGCAACTACTTCATCAGCCCCAAACACCCATCGACGCCACAACAGTCGCAACAGGATTCGCACAGTCGAACCCCCACTGAAATGTCTTCATCGCCCATTACGGGCTTCAGCTGTGACATGTGCGGCCGCAATGACTTCCGTACAGAGACCGAAATGCACTCGCATCGCAAGATTGTTCACAACATGAAGACCGGCGTAAGTCTGCGCTGTGCCTATTGCTCGGGCAATTTCAAATCACGCAACGAGCTGGAGCACCACATGAAGACGTGCCACAACTCAACGGGCAAGCACAAGTGCTTGATCTGCGATGAAATCTTTCCATCGCCCGCCATTTTGGCCGAACACAAGCTGCAGCACTCCAAAGTGGGCCAATCGGGCAAGTGTTCGCATTGTGCGAAGCCTCTGAACGATGTAGCGGCGTTCAAAGATCACCTCAGTGATCATAACACAGAGGGACAGAAACCAGTCCAGTGCATCTGCTGTCGCCAATCGTTGCACTCGGAATTCGAGATTAGTCTTCATGCTAAattCCACACCAAATCTTCGAACATGCCTGAAAGTGTTTGCGCTTTGTGCCTAGAGCCCATACAAAACTCCACCAGCGAGGCTAAAGTATGCGAGAAATGCTGTCGCAAACACAATCTCAATGCTAAATACAGTAAACAACGTGAATGCTTCGAGCGGGCAGCCAGCGAGGCAGCGCAGAGACACTACATTGAGAACCGTTGTAACCTTTGCAAAATGATACTGCCTCACAGACACAAGCTCCAGGAGCATTTGGTCGAACACACGTTTGCAGGCTGTGAGGATCGTGGCTTCAATTGTTACATCTGCTCGGCTGTGTTCACGGCACCCAGTGGCCTGCTAGGTCACATGACCGAGCACGGATTGAATGCGCGTCCTTACGACTGCAATTTATGCACCGACAAGTTCTACTTCCGTGCAGAATTGGAGCATCATTTGGTAGATCATGAACTACGTTCGGCCAAAGAGGTGCGAGACACCCCGATTGCCCCAAAGGTGGTTGATCAGAATGCTGCTGGGGGGCTGGTGGAACAAAAGGTGGCAATTGCCGAAATGTCTGTGACCGAAGTCAAACAGGAGGTATTTGAGGCTGATAACAAATCAAATGTGGGCGACGATGATGAGTACATTGAAGTGGAGAAGGTGCCGGAAGTCATCAATGCAGCACAGCACGAACATGAGAATGAGAAGGACCAGGAGTCTTCGTCGAAGTCAACGGAAGCCGATGCATCGTAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHPQLQQHLPSHHHLQHLQGLHQQHDEGGSQTHCLRRHAASSKTNGVVNVEGAENDNDRDGDHDDDDEPTYDKNGAESRTTKSHGSAAANGNANTLELKRQGRHHRHVEHGATMKIPTKLRKIDRDAGKFDKLTGEGIKSSADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSNGSLQKRRYAMATIASDSSPSRLEYPKRMRVSFLNCSFCTKGDFNTLEQLNAHIQAMHEKELQPVGNPQSLNAGETSVSVNAFQLACEYCTMKFPNIPAMFQHMRTTHIDRLTSPNSYFEHFNRLAASGTFSPRLVSTKSLQRNDTEENIIKVEQIIGSPKSSDAKQEEEPTDLSQNKRRSETPNHSQQASPQMAPEKPGVFFCNQCNAGLPDFESFRNHLKSHIAQGLNLVCHHCGLSLRDQPEYERHVIAHFLIANSEYNCASCNKTYAKPEELQKHLLDSHVVTMYKCSLCSELFDSKVAIQVHFACAHSVETKLLRCSACMEVFRAEADFNIHVKTRHQTANGNQSNSNTSLQCMFCRTVCSSDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGNERAPVNPNKEQPPTSFEEHAPNSGPHNAMSPMNSLYVNALFGKAPLMPLAAQNNNNSILDYNVAFAAAHLNKGLFPNAAAAAAAAGKFYSPLQVDTSAMKHPTLMYGLSQRYFDTNRTLMDMYAQHQQDKAAAAAGNYFISPKHPSTPQQSQQDSHSRTPTEMSSSPITGFSCDMCGRNDFRTETEMHSHRKIVHNMKTGVSLRCAYCSGNFKSRNELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKPLNDVAAFKDHLSDHNTEGQKPVQCICCRQSLHSEFEISLHAKFHTKSSNMPESVCALCLEPIQNSTSEAKVCEKCCRKHNLNAKYSKQRECFERAASEAAQRHYIENRCNLCKMILPHRHKLQEHLVEHTFAGCEDRGFNCYICSAVFTAPSGLLGHMTEHGLNARPYDCNLCTDKFYFRAELEHHLVDHELRSAKEVRDTPIAPKVVDQNAAGGLVEQKVAIAEMSVTEVKQEVFEADNKSNVGDDDEYIEVEKVPEVINAAQHEHENEKDQESSSKSTEADAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -