Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: -
Assembly: GCA_951394025.1
Location: OX596012.1:19919362-19924489[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00059 0.047 14.7 0.7 1 23 263 285 263 285 0.97

2 26 4.4e-05 0.0035 18.3 2.6 1 23 291 313 291 313 0.98

3 26 0.0087 0.7 11.0 0.5 2 23 346 367 345 367 0.96

4 26 0.011 0.89 10.7 3.8 1 23 438 461 438 461 0.97

5 26 0.0013 0.11 13.6 1.4 2 23 539 561 538 561 0.96

6 26 0.023 1.8 9.7 1.6 1 23 568 591 568 591 0.96

7 26 0.15 12 7.1 1.9 2 23 599 620 598 620 0.96

8 26 0.00052 0.042 14.9 0.6 1 23 697 720 697 720 0.97

9 26 0.37 30 5.9 2.1 1 21 728 748 728 749 0.89

10 26 0.0035 0.28 12.3 0.1 1 23 758 781 758 781 0.96

11 26 9.8e-05 0.0079 17.2 0.3 2 23 797 818 796 818 0.97

12 26 2.9e-06 0.00024 22.0 2.6 1 23 825 847 825 847 0.99

13 26 3.5e-05 0.0028 18.6 2.2 1 23 994 1017 994 1017 0.96

14 26 3.1 2.5e+02 3.0 0.8 1 19 1024 1042 1024 1042 0.94

15 26 0.00054 0.044 14.8 1.3 1 23 1054 1077 1054 1077 0.98

16 26 0.0001 0.0081 17.1 1.5 1 23 1093 1115 1093 1115 0.96

17 26 9.2e-05 0.0074 17.3 2.6 2 23 1122 1143 1121 1143 0.97

18 26 2.6 2.1e+02 3.3 0.0 2 20 1170 1188 1169 1190 0.90

19 26 0.0085 0.68 11.1 3.2 1 23 1243 1266 1243 1266 0.98

20 26 0.067 5.4 8.2 3.3 1 23 1303 1326 1303 1326 0.95

21 26 0.00011 0.009 17.0 4.1 1 23 1355 1378 1355 1378 0.98

22 26 1.9e-05 0.0016 19.4 0.2 2 23 1411 1432 1410 1432 0.95

23 26 0.00032 0.026 15.6 3.1 1 23 1438 1460 1438 1460 0.99

24 26 3e-07 2.4e-05 25.1 3.4 1 23 1466 1488 1466 1488 0.98

25 26 2.7e-07 2.2e-05 25.2 2.4 1 23 1494 1516 1494 1516 0.99

26 26 0.0018 0.15 13.2 0.1 1 22 1522 1543 1522 1546 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00059	0.047	14.7	0.7	1	23	263	285	263	285	0.97
2	26	4.4e-05	0.0035	18.3	2.6	1	23	291	313	291	313	0.98
3	26	0.0087	0.7	11.0	0.5	2	23	346	367	345	367	0.96
4	26	0.011	0.89	10.7	3.8	1	23	438	461	438	461	0.97
5	26	0.0013	0.11	13.6	1.4	2	23	539	561	538	561	0.96
6	26	0.023	1.8	9.7	1.6	1	23	568	591	568	591	0.96
7	26	0.15	12	7.1	1.9	2	23	599	620	598	620	0.96
8	26	0.00052	0.042	14.9	0.6	1	23	697	720	697	720	0.97
9	26	0.37	30	5.9	2.1	1	21	728	748	728	749	0.89
10	26	0.0035	0.28	12.3	0.1	1	23	758	781	758	781	0.96
11	26	9.8e-05	0.0079	17.2	0.3	2	23	797	818	796	818	0.97
12	26	2.9e-06	0.00024	22.0	2.6	1	23	825	847	825	847	0.99
13	26	3.5e-05	0.0028	18.6	2.2	1	23	994	1017	994	1017	0.96
14	26	3.1	2.5e+02	3.0	0.8	1	19	1024	1042	1024	1042	0.94
15	26	0.00054	0.044	14.8	1.3	1	23	1054	1077	1054	1077	0.98
16	26	0.0001	0.0081	17.1	1.5	1	23	1093	1115	1093	1115	0.96
17	26	9.2e-05	0.0074	17.3	2.6	2	23	1122	1143	1121	1143	0.97
18	26	2.6	2.1e+02	3.3	0.0	2	20	1170	1188	1169	1190	0.90
19	26	0.0085	0.68	11.1	3.2	1	23	1243	1266	1243	1266	0.98
20	26	0.067	5.4	8.2	3.3	1	23	1303	1326	1303	1326	0.95
21	26	0.00011	0.009	17.0	4.1	1	23	1355	1378	1355	1378	0.98
22	26	1.9e-05	0.0016	19.4	0.2	2	23	1411	1432	1410	1432	0.95
23	26	0.00032	0.026	15.6	3.1	1	23	1438	1460	1438	1460	0.99
24	26	3e-07	2.4e-05	25.1	3.4	1	23	1466	1488	1466	1488	0.98
25	26	2.7e-07	2.2e-05	25.2	2.4	1	23	1494	1516	1494	1516	0.99
26	26	0.0018	0.15	13.2	0.1	1	22	1522	1543	1522	1546	0.90

Sequence Information

Coding Sequence: ATGGACAGAATGCGTGCCCGTGGAAACGCTCGATGCAGGACTTGCTACGACAACAGTGGCACATCCAATTTTTACCCACTTCATGAGAAGTTCTCCGATTCTCTCAACTCCCTGGGAGACCTTCTTCTGGAAATTGCTAAAATAGATaCCAAAAGGGAGAATGTGGCCGCCACCTTACCGCAGCACCTCTGCGGCAACTGTTCGCGGAAGCTGAAGAGTGCGTATTCCTTTGTTGTGCAAGCGCAAAAGGTTAACGCACAATTGCTATCGAGCTTGAGTTCTGTGGGAGGAGAGGGGCAAATTGAGCGGAACAAGTTGGATAGCCTTCTGGCAGAGGATCTTATCGATATTCCATCGCTCTCCAACGAATGCGTACAAGTTAAGATGGAGGTTGACTATGCAGAGAGCAGCTTTTGCGATACATTGGGTGTCCTGAATGAAACAACGGACAACGATGCCACAAAACCCGCTCTGGACGCGGAAATCAAACAAAAGGCTAATGATTCGTCTGATGTTGGGCTCTTGAAGCAGGAAGAATCTATAAGTAATCAAGAGACCCCAAGCAGCTCTAATGAAGgaaatttcaaattcgatCCCATAACAATTGCCGAAACGCAATGGCAATCGGATGACAATGATGATTCGAACGTTATTGAGCCGACCTATGAAAGCGAAACCGAGAGTTCCGATAGCGAAGTCGAGGCAGCACCGAAGCGGCGTGGTCGTGGACGTCCTCGGATGAGTCAGGCCAAGAAGTCGTCGTCGCCAAATGCCGTGGGCGGACGCTACATCTGCCAAGTGTGCAAGAAAACATTCGCATGGAAAAAGGACTTGCAGCGGCATGCGAACAGTCACTTTGCCACGGCCGATTACGAATGCGAGTTCTGCGAGCGGAAATTCTTCCGCAAGGACAAACTGAAGGACCACATGAAGATTCATCTGAAGCGTTCGGGCGGTTATGGTCTGCGACCGCCGCGCCACCCGGAATGGAATTTCGCAGAGCGTTTGTACACGGATCAGCACTTCTGCTTGATACAGTGCAAACTGTGCGGCGATAATTTCAAGAGGACACTCGAACTACGCCAACACATGGCCCAACACGAGGATCCGTCCACGTTCAATCTGCAACTGGACAGCGAAGTCGTGAAGGAGCAGTACCCGCAAGTGCAGAACCTGTTGGAGGTAAAGCAGAGCATAGGCTCGGAGATTGCTCAGCAGCGTTTGGCCAAGTACTATGCCGTGGTGAACGAATACGGCTATGAGATGTGCCTGAGCGACTCGGACTCGGACAGCCCGGGTGCTGGCGCGAAGTACAAGTGCGAATTGTGCCACGACACATTCTCGCGCAAGTACAAAGTGTTCGCACACATCAAGCAACAGCATGTCAGCGATCAGCTGCCACACAAGTGCGCCTTCTGCAAGGTGGAGTTCGTCTGCGAGCAGATGTACCGCCTCCACACGCAGACGCAGTGCCGCAGCAAGGAGAAGAAGTACCAGTGCCTGAAGTGTCCCGGCAAATTCATGTGGCTGGAGAACTTGGAGGAGCACAAGTGCTCGAATCGTCTGAACACACCCGAGTACAAGGCGACGTTACCGCACAAGCGTGACCTGCTGCAGTGCGATGTTTGCAACAAGACATTCGTCTGGATGAAGGATCTGAAGCGGCACCAGAAGAAGACTCACGACGACGAAGGGAGCTGTCACGAGTGTTCGATTTGCTTTCAGCGCTTCCTCAAGGCGGACAACCTGCGCCAGCATGTGCGGGAAAGTCACGAGCAGCTCAAGCGACGCCTTGAATGTCGCTTGTGCGAGGAGAAATGCGAAAAACTATCGCAGCTTCGAGGGCACTTGCAAAAGCATGCCGATGGTTTCACGGGCATCAATATGGCGGAGGGTCACTTCTTCAAAGTGTACCACCCCGAGAGCAGTGAGGGGCGGGAAACAGAAGTGACGGGTGAGATTGCCGCCGATTTCCTAATGAAGAATTTATCGCGTTTCTACTCGGCGGTCGACGAGAGCGGCAATGAGCTCAGTTTGGATGACTCCGAATCGGATGAGGAGTTGCTAGCAAATGATTCGCCCGCCACGTACGCATGTGAGATATGCACTGAATCCTTCGACAGGCGCAAACGCCTACTCCAGCATCAGCAGAGTGAGCATGCGAGCCTGGAAGCACTGCCCCATGCCTGCCCCGAGTGCAAGAAGCAATTCGTGTGTCTGGCCCTGCTGCAACATCATCTCAGCCGCGATTGCCTCAATTTGCATAAGAAATTCCAGTGCGAGAAGTGTCCGGCACGATTTGTTTGGGCCGACAACCTCCAGGCGCATCTGCAGTTGAAGCACATCGACCCCGAACAGCAGATAAGTCGCCAATTGGCCAATAAACTGCAGTGCGATCAGTGCGACAAGGTGTTCATATGGCCGAAGGATCTGACGCGGCACAGGCGCGTCCACATGCCGGACGACGAGAAATACGAGTGTCCCCTGTGTGATCGGAAGTTCAATCGCAAGGACAACATGCATTCGCATATGAAGGTGCACGGGAACACGGCGGCGGCCGAAGTCTGCAAGAAGGAACAGAACAAAACTAAGCAAGCGAAAGTGAAGGCAATGGATAAAAACCTGTGCAAACCGAATGGCTGCAAGGTAATACAATGCATGATCTGCTGCTCGAAGCACTCGAAAATTTCCGATCTTCGCACGCATTTGCGTACACATCAGTACGTTGTGTCGTTTGCCCAGCGACGGAGTCAGGAGACGATTGGCGACATCTCCGCCCTGCTCTATCCCGACGAGCCCGTTATGTTGCAGGAAGCCCTGACCGAACGCATCATTGCCGACGTCAGTGGGCAACAACTGGAGCGTTTCTACTCGATAACCAATGAGGTGGGCTACGAGCTGAGCATCAACAGTTCCGAAACGGAAAGTGACTCGGAGGCGGAGGTCGCAGCACAGCAGCAAGCCGACACTCGGCACAACTACAGCTGCGATGTGTGCGGCGAGTCTTTCCGGCGCAAATATAAATTCTTCGAGCATCAAAAGTGGAGGCACAGCTGGGAAGAGGCGGATCACGTGTGTGCGCACTGCAATGCGCGCTTCCTTTCCGCCGAATTCCTGCAGCGGCACTGCGAACAACAGTGCAACAACACGCTTAAGCGCTTCGTGTGCCGCAAGTGTCCGCGTCGATTTATGTGGAAGGACAATCTGAAGACGCATTTGCGTACGATCCATGCCGAGGTCGACGAAACAAAAAGCAAGCCCGACCCTCCCAGCTCTTTCGATTGCTTGCAATGCAAGCGTAgctttaaaatgcaaaaggaTCTCACACGCCACATGGTGATACATCGTGATGCGCCCGTCCTCAAATGCCTTTGGTGTCCGCGAAAGTTCTATCGCCAGGAGAATCTCCATATGCACATTCGGCGCCACGGCATTCAACCGGGCTCTCTGGTGGCGGCCGAGTGCATGATCAGCGCCACAACTGTGCCGAATGGCGTGAAAAAAATCGTCTGCAAAGTGTGCAACTTGCAGTTTAATGGCATTGCCCCATTACGTTCGCACCTTCTGCAGGAGACGGCTTGCGCTACGTCGCCGCATCACAACTTCAGTTCGCTGTTCAATTATTCGATTACAAACAAACTCGGTTTTGAGTTGCACATCGATGACTCGGAGACTGACGAGGAGGCCGGAGAGGCTACGAATAAGGCTGAAGGCACTCCTCTAAAGTACACTTGTGTGATTTGCAGCCTAACCTGCAGGCGCAAATTCGAAATGAGCCAGCATCAGCGATCGGTGCACAAACACGAGCAGATACCGCTGAAGTGTGAAAAGTGCATTTTCAAGACTGTCTCGCAGGAAATACTTTCGCACCACTCTCGAACACAGTGCTTCAATATGGAAAAGCAATTCCAGTGCCATAAATGCTCCTTCAAATTCATGTGGCAGGAAAACTTGCAGAATCACCTCCTGCAGATGCACACGGAGGAGGAATCTCACCCATCCACCAGCAGTCAAGCACCCAGTGGCGCTGCCGGCGCCGCTGCACCATCAGACCCTAGAATGTTTCAGTGCGACAAATGCCATCGCCGATACAATCGTAAGGATCGCCTCACGGCCCACATCAAAAAAGTGCACACCGACGGCGGCAGTGGCAGCGAAAAGCCTGATGACTCTCAAATTGACCCAATCACTGgggaaaagtgcaaaaagcctGTCTTGGAAAAGAAGTTCCTCTGCGCATTCTGCGGACGGGCCGTCACATCATCGTCGAATCTCATCATTCATATGCGTCGTCATACCGGAGAAAAGCCTTTCAAGTGCGACTTTTGCGACATGGCCTTTCCACGCTCCTCCGATCTGCAGTGCCATCGGCGCACCCACACGGGCGAGAAACCCCACAAGTGCACCGTCTGCGACAAGGCGTTCTCGCGCTCCTACAAACTGCAGACGCACATGCGCATCCACTCAGGAGAACGGCCGTACAAATGCACTTACTGCGAGAAGAGCTTCACCCAGTCGAATGATCTGACGCTGCACATACGCCGCCACACGGGAGAACGTCCGTATGTGTGCGGCATTTGCGGCGAACGTTTCATCCAGGGTACGGCGCTCAAGAATCATCGTACAATGCGTGGCCACTACGAAGACCTCGAACCGCGGCGATCGCTGCTGGAGCAGTTCTAG
Protein Sequence: MDRMRARGNARCRTCYDNSGTSNFYPLHEKFSDSLNSLGDLLLEIAKIDTKRENVAATLPQHLCGNCSRKLKSAYSFVVQAQKVNAQLLSSLSSVGGEGQIERNKLDSLLAEDLIDIPSLSNECVQVKMEVDYAESSFCDTLGVLNETTDNDATKPALDAEIKQKANDSSDVGLLKQEESISNQETPSSSNEGNFKFDPITIAETQWQSDDNDDSNVIEPTYESETESSDSEVEAAPKRRGRGRPRMSQAKKSSSPNAVGGRYICQVCKKTFAWKKDLQRHANSHFATADYECEFCERKFFRKDKLKDHMKIHLKRSGGYGLRPPRHPEWNFAERLYTDQHFCLIQCKLCGDNFKRTLELRQHMAQHEDPSTFNLQLDSEVVKEQYPQVQNLLEVKQSIGSEIAQQRLAKYYAVVNEYGYEMCLSDSDSDSPGAGAKYKCELCHDTFSRKYKVFAHIKQQHVSDQLPHKCAFCKVEFVCEQMYRLHTQTQCRSKEKKYQCLKCPGKFMWLENLEEHKCSNRLNTPEYKATLPHKRDLLQCDVCNKTFVWMKDLKRHQKKTHDDEGSCHECSICFQRFLKADNLRQHVRESHEQLKRRLECRLCEEKCEKLSQLRGHLQKHADGFTGINMAEGHFFKVYHPESSEGRETEVTGEIAADFLMKNLSRFYSAVDESGNELSLDDSESDEELLANDSPATYACEICTESFDRRKRLLQHQQSEHASLEALPHACPECKKQFVCLALLQHHLSRDCLNLHKKFQCEKCPARFVWADNLQAHLQLKHIDPEQQISRQLANKLQCDQCDKVFIWPKDLTRHRRVHMPDDEKYECPLCDRKFNRKDNMHSHMKVHGNTAAAEVCKKEQNKTKQAKVKAMDKNLCKPNGCKVIQCMICCSKHSKISDLRTHLRTHQYVVSFAQRRSQETIGDISALLYPDEPVMLQEALTERIIADVSGQQLERFYSITNEVGYELSINSSETESDSEAEVAAQQQADTRHNYSCDVCGESFRRKYKFFEHQKWRHSWEEADHVCAHCNARFLSAEFLQRHCEQQCNNTLKRFVCRKCPRRFMWKDNLKTHLRTIHAEVDETKSKPDPPSSFDCLQCKRSFKMQKDLTRHMVIHRDAPVLKCLWCPRKFYRQENLHMHIRRHGIQPGSLVAAECMISATTVPNGVKKIVCKVCNLQFNGIAPLRSHLLQETACATSPHHNFSSLFNYSITNKLGFELHIDDSETDEEAGEATNKAEGTPLKYTCVICSLTCRRKFEMSQHQRSVHKHEQIPLKCEKCIFKTVSQEILSHHSRTQCFNMEKQFQCHKCSFKFMWQENLQNHLLQMHTEEESHPSTSSQAPSGAAGAAAPSDPRMFQCDKCHRRYNRKDRLTAHIKKVHTDGGSGSEKPDDSQIDPITGEKCKKPVLEKKFLCAFCGRAVTSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGEKPHKCTVCDKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYVCGICGERFIQGTALKNHRTMRGHYEDLEPRRSLLEQF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -