Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: -
Assembly: GCA_951394025.1
Location: OX596011.1:80845087-80852697[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 5.2e-05 0.0042 18.0 2.3 1 23 236 258 236 258 0.99

2 33 0.12 9.7 7.4 0.5 1 23 263 285 263 285 0.95

3 33 0.00077 0.062 14.3 2.2 1 23 292 314 292 314 0.99

4 33 0.00021 0.017 16.1 0.9 1 23 321 343 321 343 0.98

5 33 4e-05 0.0032 18.4 1.6 1 23 350 372 350 372 0.99

6 33 0.0053 0.43 11.7 2.1 1 23 379 401 379 401 0.98

7 33 0.0049 0.4 11.8 0.6 1 23 408 430 408 430 0.98

8 33 3.1e-07 2.5e-05 25.0 0.8 1 23 437 459 437 459 0.99

9 33 6.2 5e+02 2.1 0.0 5 21 470 486 468 487 0.92

10 33 0.00022 0.018 16.1 0.6 1 23 495 517 495 517 0.99

11 33 0.088 7.1 7.9 2.1 1 21 524 544 524 546 0.94

12 33 0.57 46 5.3 0.2 1 23 553 575 553 575 0.97

13 33 0.00017 0.014 16.4 0.2 1 21 582 602 582 603 0.95

14 33 3.5e-07 2.8e-05 24.9 0.5 1 23 611 633 611 633 0.99

15 33 2.8 2.3e+02 3.1 0.1 1 9 640 648 640 654 0.85

16 33 0.0017 0.14 13.3 3.4 2 23 886 907 885 907 0.96

17 33 0.054 4.3 8.5 2.1 1 23 912 934 912 934 0.88

18 33 0.0024 0.19 12.8 4.3 2 23 942 963 941 963 0.96

19 33 1.1 91 4.4 0.3 1 23 968 990 968 990 0.89

20 33 0.36 29 5.9 1.1 2 23 998 1019 997 1019 0.96

21 33 0.11 8.8 7.6 2.1 2 23 1025 1046 1024 1046 0.88

22 33 0.0002 0.016 16.2 3.0 1 23 1051 1073 1051 1073 0.98

23 33 0.039 3.1 9.0 2.0 1 23 1078 1100 1078 1100 0.97

24 33 0.022 1.8 9.7 0.1 2 23 1225 1246 1224 1246 0.94

25 33 1.2e-05 0.00095 20.1 0.5 1 23 1274 1296 1274 1296 0.98

26 33 2.4e-05 0.0019 19.1 1.1 1 23 1303 1325 1303 1325 0.98

27 33 0.23 19 6.6 1.0 1 23 1330 1352 1330 1352 0.95

28 33 0.00088 0.07 14.2 3.4 1 23 1359 1381 1359 1381 0.99

29 33 0.0015 0.12 13.4 0.0 1 23 1386 1408 1386 1408 0.97

30 33 0.0011 0.085 13.9 2.8 1 23 1444 1466 1444 1466 0.98

31 33 8.2e-05 0.0066 17.4 1.1 1 23 1525 1547 1525 1547 0.98

32 33 0.022 1.8 9.8 0.1 1 23 1552 1574 1552 1574 0.97

33 33 0.017 1.3 10.1 2.8 1 23 1610 1632 1610 1632 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	5.2e-05	0.0042	18.0	2.3	1	23	236	258	236	258	0.99
2	33	0.12	9.7	7.4	0.5	1	23	263	285	263	285	0.95
3	33	0.00077	0.062	14.3	2.2	1	23	292	314	292	314	0.99
4	33	0.00021	0.017	16.1	0.9	1	23	321	343	321	343	0.98
5	33	4e-05	0.0032	18.4	1.6	1	23	350	372	350	372	0.99
6	33	0.0053	0.43	11.7	2.1	1	23	379	401	379	401	0.98
7	33	0.0049	0.4	11.8	0.6	1	23	408	430	408	430	0.98
8	33	3.1e-07	2.5e-05	25.0	0.8	1	23	437	459	437	459	0.99
9	33	6.2	5e+02	2.1	0.0	5	21	470	486	468	487	0.92
10	33	0.00022	0.018	16.1	0.6	1	23	495	517	495	517	0.99
11	33	0.088	7.1	7.9	2.1	1	21	524	544	524	546	0.94
12	33	0.57	46	5.3	0.2	1	23	553	575	553	575	0.97
13	33	0.00017	0.014	16.4	0.2	1	21	582	602	582	603	0.95
14	33	3.5e-07	2.8e-05	24.9	0.5	1	23	611	633	611	633	0.99
15	33	2.8	2.3e+02	3.1	0.1	1	9	640	648	640	654	0.85
16	33	0.0017	0.14	13.3	3.4	2	23	886	907	885	907	0.96
17	33	0.054	4.3	8.5	2.1	1	23	912	934	912	934	0.88
18	33	0.0024	0.19	12.8	4.3	2	23	942	963	941	963	0.96
19	33	1.1	91	4.4	0.3	1	23	968	990	968	990	0.89
20	33	0.36	29	5.9	1.1	2	23	998	1019	997	1019	0.96
21	33	0.11	8.8	7.6	2.1	2	23	1025	1046	1024	1046	0.88
22	33	0.0002	0.016	16.2	3.0	1	23	1051	1073	1051	1073	0.98
23	33	0.039	3.1	9.0	2.0	1	23	1078	1100	1078	1100	0.97
24	33	0.022	1.8	9.7	0.1	2	23	1225	1246	1224	1246	0.94
25	33	1.2e-05	0.00095	20.1	0.5	1	23	1274	1296	1274	1296	0.98
26	33	2.4e-05	0.0019	19.1	1.1	1	23	1303	1325	1303	1325	0.98
27	33	0.23	19	6.6	1.0	1	23	1330	1352	1330	1352	0.95
28	33	0.00088	0.07	14.2	3.4	1	23	1359	1381	1359	1381	0.99
29	33	0.0015	0.12	13.4	0.0	1	23	1386	1408	1386	1408	0.97
30	33	0.0011	0.085	13.9	2.8	1	23	1444	1466	1444	1466	0.98
31	33	8.2e-05	0.0066	17.4	1.1	1	23	1525	1547	1525	1547	0.98
32	33	0.022	1.8	9.8	0.1	1	23	1552	1574	1552	1574	0.97
33	33	0.017	1.3	10.1	2.8	1	23	1610	1632	1610	1632	0.97

Sequence Information

Coding Sequence: ATGAAAAACGTACAACAGCTGCAGAAGATTCTCTACAAGGAAAAAGGAGCAACAGATGTGACCTCAAACTCAAGAAAGCTGGAACTGGAATCATCGCCTGAACTATTAGAGATCCTATCTGTGAAGGAAGATAACGGTCAAGTTATTATTGAAGTTCGTTCTCCGAGTGGTTTTCCCCCATCAATTTCTGGAACCGATGGTGAAACGAACAGCCATCAAGCAAACCCAGATGGCTTCACAGAAATTAAGGCTGAAGATGAATGCGAATTCGGTGGTACGAGTATTTCAGTCCAGTCAATTCCTACAACCGATGATGAGACGCTTAGCAAACAAACACTCCAGAAGGTgttcacagcaattaaaatcAAAGATGAAATGGAATTCTGCCCTATGAGTTCTACTGCCAAATCAATTGCAGGAAACGATATCGAAGAGTTTAATAATCAAGCAATCCAGGATATATTTGCAGAAATCAAAGCAGAAGACGAAATCGAATTCGGTGAACCGAGTATTTATGGCCAGTCTATTGCTTCAATCGTTGTTATACCGCAAATCAATCTAATACTCCAGGACAAGCTCACAGAGATTCAAGTTAAAGAAGAATTGGAATTCTCtgatgaaaatgaaatggatGCTTTGGATTCTCCAGAAACTACAATAGCTGACAAACCTCCTGATGTAAGCGAAGACAAAAAACAACCTCAGTTCAAATGCTCCATCTGCCCTAAGAAGTGTCCAACAAGAGTTGGTCTGAAAACTCATCAAATGACTCATAGTAAACCAAAGTTCCGCTGCAGTGCATGTGGCATGCCCAAATTCACGCAAAGCGATTTGGATAGACATGTGAAGACGCACGATTccaatttaatatatttcacGTGCTACATCTGCTTGAAGGAGTATTCAGCCAAATATAGTCTGTTCACGCATATGAAGACGCACAGCTCCAATCGAGAATATTTCGAATGCAAAATCTGCTCGAAGACGTATGCATCGAAGCAATGGCTGGACAATCATCGAATGTCGCATAAACCCAATTCAATAAACTTCAAGTGCGACATCTGCTTAAAGATATATTCAACCAAGACAGGTCTGTACCAGCATATGAAGACGCACGACTCCGATCGAGAATATTTCGAATGTGACATCTGCCCGAAGAAGTATTTAACGAATCAAGATATGAAAAAACATcgaaaaaaacatggttggaatcgattttacttcaaatgcGACATCTGCCCAAAGAAGTATTTAAGGAAGGAATGGCTGGACGAACATCGAAAAATTCATGACTGCAACGCGATTAATTTCACCTGCAACATCTGCTCAAAGATGTTTACAACTGAGACAAATCTGGTCGCACATATGAATACGCACGACAGCAAGCGATTATATTTCAAAAGCATCATCTGCTCGAAGAGGTATATAACGAAGATATATCTGGATGAACATCGAAAAATACCCGTTTGCAACCCGATTCATTTCACCTGCAACATTTGCTTTAAGAAGTATAGAATAGAGGCAAATCTGGTCGCTCATTTGAAGACGCACGAAACCAATCAGGAATATTTCAAATGCGACATCTGCCCGAAGACGTATTTAACGAAGCAAGGGCTGGCCGTACATCGAAAATGTCATAACACCAAGCCAATGTATTTCCCGTGCGACATCTGCCCGAATAGGTATTTAACGGAGCAGTACCTGGCTGAACATCGAAAAAGTCATGATCCCAAGTCTAAAAGTTTCCCGTGCGACATTTGCCCGAAGAGGTATTCAACGGAGCAAAATTTGACTGAACATCGAAAAAATAATAGTTGCAACCCGATTCCTTTCACGTGCAACATCTGCCCAAAGAAGTATACAACGGAGGAAAATCTGGTCGCTCATATGAAGACGCACGACGCCAAgccaatatttttcaaatgcgACATCTGCCCGAAGAGGATTGCGAACGAGGGTACTTGTAAAAAGACGAAAGTACCCTACAAGGCAAAAGAAACAACCCATGTGTCTTCAAAATCAAGTAAGTCTCAGATGGAACTGGAATCGTCGCCTGAAGAATTAGAGATCTTATCAGTGAAGGAAAATAATGGTCAAATTATGATTGAATTCCGGGCAGCGTGTACTTCTGCTCCACCAATTGCTGGAGCCAACGATGAGATGCACACAAATCAAGCAGTCCTAGAAGAGTTTGCAGAAATCAAAGTGGAAGACCAAATCGAATTCGGTGAATCCAGTATTTCGTTCCAGTCAATTGATATAACCGGTGGTGAACAGcacaaatatcaaaaagttCATGGCGAGTCCACATCAATTAAAATAGAagacgaaatggaattttgtGCTTTAAGTTCTACTGCCCAATACATTCCTACAACCGATGACGAAGAGCACAACAATAAAGCAATAAAAGACAAGTCTGTGGAAATCCAAGTAGACGAAATCGAAGTTGGTGAACCCAGTGTTTCTGTCCAGCCAATTTCTACATTCGATGTTGAATCGGACAGCAATCAAACAGTCGAAGACGAGCTCACAAAAATTGATGATGAAGTGGAATTCTATGACGAAGTGCAAACAAATTCATTAAATAATACAGAAGCAACAGTTCCCGACAAACCTGGCGATCTCGAGGgcaacaaaaagaaatctGAACTCATATGCGAAATTTGCTCGAAGAAATGTACATCGAAGTCAAGTTTGTACTCACATCGACTTCGTCATGGTAAACCGAATTTCCATTGCACTATTTGTAGCGTAGCCAAATTCTTTCAATCCGAGTTGAATATACATATGAGGACGCACGATACCAATCAAATAGAACTCACATGCGACATCTGCTCCAAGAAATTTTCAAGCAAGCATTCCCGTACGCAGCATCAAATACGCCATGGTAAACCGAATTTCCATTGTACTATTTGTGGCGTTGCCAAATTCCTTCAAGCCGAGTTGGATATACATATTAAGACGCACGATACCAATCGCCGATCGATACCATGTGGCATTTGCTCCAAGAAGTTTTTAACAAAGGAAGGTGTGTACCATCATCGAATGCGTCATGGTGAACCAAAATTGCACTGTAGTTTTTGTGGCGCTGCTAAATTCACACAATTCGAGTTGAACTCCCATATGAGGACGCACTATCCAACATATTTCAAATGCGACATCTGCTCCAAGAAGTTTACAAGGACGACCACTCTGAGCGAACATCGACTGCGTCATGGTAAACCGAATTTCCACTGTGATGTTTGTGGCGTGGCCACATTCACACAAAGAGAGTTTAACACACATCGACTGCGTCATGGAACAACCGCTGAGGCCCCAGAATCAGAAAAGTTGAAACTGGAATCACCGCATGAGCAATTGGTTATCATATCGGTGAAGGAGCATAACGGACAAATTATGATTGAGTTCCAGGCTCAAAGTAGTACTTCTGTATCAACAATTCCCGAAATCAAAGTATACGATGAAATCGAAATCGGTGAAACGAGTCTTTCTGTCCAATCAATTCATACAGCCGATGGTGAGTCGGACAGCAACCAAGCAATCATGGACGCGTTGACCGAAATTGAAGAAATGGATTTCGAATTGCAAGAAGCTGCATCCGGTACTTCGGAAATTACAATTGCCGACAAACCTGATGTAAGCGAAGAGAACAAACATCAAGATGAGCTCATATGCGACATCTGCTCCATGGAGTATTCAACAAAAGCAGGCCTAGATAAACATCGACTGGGTCATGatgaaaaaacattaaattgtatttttggtgGCGTAGCCAAATTCATACAACAGGAGGAGAAGGTGGAGAAGTCAATATATTTCACTTGCGACATCTGCTCAAAGAAGTATGCATCAAAGACAAATCTGGTCGCACATTTGAAGATACACGatccaaatgcaatttttttcacatgCAACATCTGCTCCAAGGGGTTTTCAACAAAGGCACGTCTGAACGCACATCGACTGCGCCAtgacgaaaaaaaattcaattgcaaTGTTTGTGGCCTAGCCCAATTCTCGCAACACGATATGGATGTACATATGAAGACGCACGACACCAAACCAATGTATTACAAATGCCACAAATGTCCGAAGAAGTATTTAAACGAGGACGAGCTGAGAGTGCATCAAAAGCGTCATagcaaaaagaaatttatgtGTCCAGACTGTGGTGTGGCCAAAATCACACAAAGTGAGTTAAATAGTCACATGGAGGTACACAATACCGCAAGAGATCAGTTGAAGTGCCCACAATGTGCACAATGGTTCTTGCACCAAAAATCACTGGACTTGCATGTAAGCGTGACACATAACGACGAGCTTCCCTTTCCATGTGATGAGTGTAAGGATTGCTTCGCTACAAAATATCGACTGGTTCAGCACATGCGAAAGCACGCTTCAGTCGCTAGCAGTGCAACAAATCATCAAAAGTTAAGGAAGCCACACctaaaaaaacatgaaaaacgTCAGGGTAAACCGAAATTTCACTGTACTGTTTGTGGCTTGACCAAATTAACACAAGATGATATGGATATGCATATGAAGAAGCACGATACCACCCCAATACATTTCGAATGCGACATCTGCTTGAAGAAGTATTCAAGCGAGGACAATCTGAGAGTGCATAAAAAACGtcatatcgaaaaaaattttatttgtcaaTATTGTGGTGTGGCCAAAATCACACAACGTGAGTTAAATAGTCACATGGAGGTACACAATACCGCCAGAGATCAGTTGAAGTGCCCACAATGTGCACAATGGTTCTTACACCAAAAATCACTAGACTTGCACGTAAGCGTGACACACAACGACGAGCTTCCCTTTGCTTGTGACCAGTGTACAGATTGCTTTGCCACAAAATATCGACTGGTTCAACATATGCAAAAGCACACTTCAGCTGTTAGCAGTGCAACAAATCGTCAAACGAAAAAGcgttga
Protein Sequence: MKNVQQLQKILYKEKGATDVTSNSRKLELESSPELLEILSVKEDNGQVIIEVRSPSGFPPSISGTDGETNSHQANPDGFTEIKAEDECEFGGTSISVQSIPTTDDETLSKQTLQKVFTAIKIKDEMEFCPMSSTAKSIAGNDIEEFNNQAIQDIFAEIKAEDEIEFGEPSIYGQSIASIVVIPQINLILQDKLTEIQVKEELEFSDENEMDALDSPETTIADKPPDVSEDKKQPQFKCSICPKKCPTRVGLKTHQMTHSKPKFRCSACGMPKFTQSDLDRHVKTHDSNLIYFTCYICLKEYSAKYSLFTHMKTHSSNREYFECKICSKTYASKQWLDNHRMSHKPNSINFKCDICLKIYSTKTGLYQHMKTHDSDREYFECDICPKKYLTNQDMKKHRKKHGWNRFYFKCDICPKKYLRKEWLDEHRKIHDCNAINFTCNICSKMFTTETNLVAHMNTHDSKRLYFKSIICSKRYITKIYLDEHRKIPVCNPIHFTCNICFKKYRIEANLVAHLKTHETNQEYFKCDICPKTYLTKQGLAVHRKCHNTKPMYFPCDICPNRYLTEQYLAEHRKSHDPKSKSFPCDICPKRYSTEQNLTEHRKNNSCNPIPFTCNICPKKYTTEENLVAHMKTHDAKPIFFKCDICPKRIANEGTCKKTKVPYKAKETTHVSSKSSKSQMELESSPEELEILSVKENNGQIMIEFRAACTSAPPIAGANDEMHTNQAVLEEFAEIKVEDQIEFGESSISFQSIDITGGEQHKYQKVHGESTSIKIEDEMEFCALSSTAQYIPTTDDEEHNNKAIKDKSVEIQVDEIEVGEPSVSVQPISTFDVESDSNQTVEDELTKIDDEVEFYDEVQTNSLNNTEATVPDKPGDLEGNKKKSELICEICSKKCTSKSSLYSHRLRHGKPNFHCTICSVAKFFQSELNIHMRTHDTNQIELTCDICSKKFSSKHSRTQHQIRHGKPNFHCTICGVAKFLQAELDIHIKTHDTNRRSIPCGICSKKFLTKEGVYHHRMRHGEPKLHCSFCGAAKFTQFELNSHMRTHYPTYFKCDICSKKFTRTTTLSEHRLRHGKPNFHCDVCGVATFTQREFNTHRLRHGTTAEAPESEKLKLESPHEQLVIISVKEHNGQIMIEFQAQSSTSVSTIPEIKVYDEIEIGETSLSVQSIHTADGESDSNQAIMDALTEIEEMDFELQEAASGTSEITIADKPDVSEENKHQDELICDICSMEYSTKAGLDKHRLGHDEKTLNCIFGGVAKFIQQEEKVEKSIYFTCDICSKKYASKTNLVAHLKIHDPNAIFFTCNICSKGFSTKARLNAHRLRHDEKKFNCNVCGLAQFSQHDMDVHMKTHDTKPMYYKCHKCPKKYLNEDELRVHQKRHSKKKFMCPDCGVAKITQSELNSHMEVHNTARDQLKCPQCAQWFLHQKSLDLHVSVTHNDELPFPCDECKDCFATKYRLVQHMRKHASVASSATNHQKLRKPHLKKHEKRQGKPKFHCTVCGLTKLTQDDMDMHMKKHDTTPIHFECDICLKKYSSEDNLRVHKKRHIEKNFICQYCGVAKITQRELNSHMEVHNTARDQLKCPQCAQWFLHQKSLDLHVSVTHNDELPFACDQCTDCFATKYRLVQHMQKHTSAVSSATNRQTKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -