Hrot023070.1
Basic Information
- Insect
- Heteromyza rotundicornis
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_951394025.1
- Location
- OX596013.1:50541324-50544531[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.5 1.3e+04 -3.7 0.5 72 98 297 320 282 365 0.49 2 2 3.6e-96 9.8e-92 307.4 7.1 2 218 425 627 424 627 0.92
Sequence Information
- Coding Sequence
- ATGTTTAGACCAATCAAGAATCTGATAACTTACATACAAAAGAATGCAAGCGGAAGCGCAATATTCGGTGGAACGCCAGCAGTAGCTGACGGTGAGGAGGCAGAAGAAGTGATCACACCAACTGAAGTTGAtgggaaaatgaaaaagacGTCTGCAATTTTCGTCGCAGACAAGGCTGAAAGTGCGCAGCAGCAACCAACTAATACAAACGAATTTAAAAGGGCCATCAAAGTCGTACCAGtgaacaccaccaccaccaccacaatgGCAGACAACTTCGATGAAGATGACATTGAATTGCAAATCAAGAGCAGCATAATGCTTAGGAAACCACTGGGAGAGGTAGTGGCAAGCGGTAGTGTGAAAATCGAAGAGCTCAAGGAAGCCATTATCGTGCCGTCGTCATCACCATTGCACGATCACAATCAGAATCATGCTTTGGACGATGAGCTGGAGGACTTTCGCTATGAACCGTTGCCAACCATTGCGATGGATGACTTCTGTTCGGTGGACAGCGTAGAGCCGATTGCGGATGAGGAAGACCAGGCCGATGAGTTCAATACCGAAGAAGAGGATGTGGAAGAGCGGTTTTTGGATGTGACGCCCGAAATCGAAGCATTTGCAGACAGGGAAATAATTGTGCTCAGTGAGGCAGAGCTGAATTCTTCAATCGCCTCTGACGCTTTATCCGAGGATCCCTTGGCCATCGATGATTTCACCCAGACGTCAACGCGTGAATCGATTCTAATAAATCCCTTGGACTCCTCAGCGTCCACCAATGATGAGGCTTCCACCAGCGCCGACATACTCTGGATAAATATTGATGACCTCAAGAGAAATCCAATAACgccaaaattacaaaaagacTCGACCGCTGAAAGCACGCTTCAAACACAAGTAGCCAAGGTCGCCAAGGACAAAACTGGAAGCGGTCAAGATGAACATGCCGAGGAGCTGCGTAGCGACGGTTCGGATTCCGGTTTGGGCAGTGAGACTTCCCTGCTGCAGACCACGGTCACGAGTTCAACGGATACAAGTCAAGCGCATAGCACTGCGGCCACGCCCACTCAAGCACCAGCTCACGAACAAGTTAAAATCGAGGCGACGCCTGACCAAGCCAATTTGCCAGCCGCTGTTTCCTCCAAGTCGACACTAGCCTTGAAGACACCACTGCGTTCCAATCTCAAACGTCGCCTGGATGTCGTCGACGATGATGTGCTCGATGACCCTAACACCTCCATGGCCATTGCCTCGTCCGCCCAGCAGAAGAAATTGAAACGTTCAATCAACTTTGATACCGTACAGGTGTACTATTTCCCACGCCAGCAGGGTTTCGGTTGTGTTCCTTCTGCAGGCGGCTGTACGCTCGGCATGGCCGCACACCATGTCGCCTTCAAGGCGCTCACCTTGGCCGAGCATGCTGCCGAATTGAGGCGCGCACATCGCCTGCAATTGCAAGAGATCAATCCGCGCGGCTCGTCTAGCGACGAGAGCGAAGAATCGGAGGAGGACTACCTGAGCGAAGGTAGCGGCTCCGATTTGGATGCCGAGTCGAGCGGCTTCCTGCAGCCCGTGTCGCCCAAGCAGAGGCGGGCTCTGCTGAAGGCGGCTGGTGTGCGTAAGATCGATGCTAGCGAAAAGGCCGAGTGCCGCGACATACGCAACTCCCGCGACGTGTGCGGCTGCACGTGCCGCGATTTTTGTGATCCGGACACGTGCGCCTGCAGCCAGGCGGGCATCAAGTGTCAGGTCGACCGCACCATGTTCCCCTGCGGCTGCTCTCGCGATGCCTGCGGCAATACAGTGGGTCGCGTAGAATTCAATCCGGCACGCGTTCGCACTCACTACATACACACAATTATGCgcttggaaatggaaaatcgCCAACAGCAAAATCCGCCGCTATGTGGTGGCTACGGCATGTCTGCGTCGTCCTCATCCACTTCCACGCAATCCGCATCGCCGCACGGCATGTCCGGCAACTACTACGGCATGCAAACACCATCGAATTACAGTTCGGGCTACGCTTCGCCCGCCTACACAAGTGATCCGGCGGCCAGCTACTACCAGCAGCCAAGTGCCCACTATGCCAGTGGCCTGCCCACGCCCGATTTGCTTCAGACCACTGCGGCACAATATCAACTGGATAGTTTGGACTCGGGTCTCTTCTCGGGCACAGGAACGCCATCATACGGTGAGATGCCCGCCTATGGCAGTGTGTGCTCAACCTCTGCTTCGCCCTCTTCGGTATACCCCAACATTAACTATTCCACGGTCGCCAGTGGCTTGCAAACGCAAgtctcctcTTATTCTTCCTACCACCATCAGTCCAGCACAAACTATCTTCCGCCGAATCACAGCAGTGCCACGCCAAGCACATACAGCTCGTGTGCCGTGCCCTCGGTGCCGCCCTACGGCACCGCCACGACCACTGCTGCGGGCATACACTACCATGGCGACAGTGGCGTTGCACTTGAAACCACCAGCTGCACTTCGTTGGAGGGCGCCGGCAGCAGTTTCATAAATCTGAACGCACCCATTGCCAGCTCGTCACGGCTCTCGCAAATCAACGATCTGTTGCAGCACAATCGCAACACCACTGCCGCTTTGGTAGCCGTCTCGCAATGCCCGAGCAGCGGCGCTAGTGCCACACTTTCCAGTGTGTCGGCAGCGGCCACGTCCTCGATCGACACACCGCCCATTGAAGATGCTCACAAAAGTTGCCTGGCATTTGAGGAGCTGTCGCCGCCATTGAATCCCACGCCCATTGTGGCTGTCAGAGAACACTGTGCAGCCACAAAGCTGCTGCCACACACTAAACCACCGCCCGTCGTCAGTGATGACATTGGTGAAGATGGTGTTGGATGCAATGCGGAAGCAGCTATACTCCCAGCAGCAGTTAAAGTGGCCATCAATTGA
- Protein Sequence
- MFRPIKNLITYIQKNASGSAIFGGTPAVADGEEAEEVITPTEVDGKMKKTSAIFVADKAESAQQQPTNTNEFKRAIKVVPVNTTTTTTMADNFDEDDIELQIKSSIMLRKPLGEVVASGSVKIEELKEAIIVPSSSPLHDHNQNHALDDELEDFRYEPLPTIAMDDFCSVDSVEPIADEEDQADEFNTEEEDVEERFLDVTPEIEAFADREIIVLSEAELNSSIASDALSEDPLAIDDFTQTSTRESILINPLDSSASTNDEASTSADILWINIDDLKRNPITPKLQKDSTAESTLQTQVAKVAKDKTGSGQDEHAEELRSDGSDSGLGSETSLLQTTVTSSTDTSQAHSTAATPTQAPAHEQVKIEATPDQANLPAAVSSKSTLALKTPLRSNLKRRLDVVDDDVLDDPNTSMAIASSAQQKKLKRSINFDTVQVYYFPRQQGFGCVPSAGGCTLGMAAHHVAFKALTLAEHAAELRRAHRLQLQEINPRGSSSDESEESEEDYLSEGSGSDLDAESSGFLQPVSPKQRRALLKAAGVRKIDASEKAECRDIRNSRDVCGCTCRDFCDPDTCACSQAGIKCQVDRTMFPCGCSRDACGNTVGRVEFNPARVRTHYIHTIMRLEMENRQQQNPPLCGGYGMSASSSSTSTQSASPHGMSGNYYGMQTPSNYSSGYASPAYTSDPAASYYQQPSAHYASGLPTPDLLQTTAAQYQLDSLDSGLFSGTGTPSYGEMPAYGSVCSTSASPSSVYPNINYSTVASGLQTQVSSYSSYHHQSSTNYLPPNHSSATPSTYSSCAVPSVPPYGTATTTAAGIHYHGDSGVALETTSCTSLEGAGSSFINLNAPIASSSRLSQINDLLQHNRNTTAALVAVSQCPSSGASATLSSVSAAATSSIDTPPIEDAHKSCLAFEELSPPLNPTPIVAVREHCAATKLLPHTKPPPVVSDDIGEDGVGCNAEAAILPAAVKVAIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -