Hrot005024.1
Basic Information
- Insect
- Heteromyza rotundicornis
- Gene Symbol
- bab2_1
- Assembly
- GCA_951394025.1
- Location
- OX596010.1:67348441-67384466[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.47 1.1e+03 0.1 0.0 27 34 154 161 154 162 0.92 2 2 1.9e-17 4.3e-14 52.5 0.0 1 43 686 729 686 731 0.95
Sequence Information
- Coding Sequence
- ATGGATATGACAAAGGATATCATTGATTTCACACAGAAGCTGGAGGCCTCCTCTGCCTTCACGAATGAGCCCACAGTTAGCAATGATCATGCGATTGGTGAGTGTGGCACGCTCACAGCCACAACACCCGTACGAGCAGACACTCCGCCACCACAGTCCGACGACGATCATAGCCCTGTCACAGAACCTTCAATACCGGGGGACATAGTTGGCAAGGCCAGTGAGGCAATTCGTTCAACAGGTGACCTCTCACCGCCCCCACGTCCACTGACTTCCAGCGCCGTTGTGGGGCTGCTGACGTCCGCACACGATGATGATCCCGATATGCGCGTAGACTTGCCCCTACCCAAGTCAGTTTCGTTGCCCGCTTCACCCAATCATCATTTAAGCACATCATCGCTTATGCCGCACCGAACTTCGGCCTTGTTCGAGTTCGGACGGGCCACAAACGCCATGCCCGACATACCCAAATCGACTCTAGAGCCCCTTGGTGGCTCGCACAAGAGCACATTGCCCACTATCAAGCCGAAAGCGTCCACCGCTGCTGGGGCGTCAGCCACTGGCAACCAACAGTTTTGCTTGCGTTGGAACAACTATCAAACCAATCTGACCAATGTCTTCGATGAGCTGCTGCAGAATGAATCATTTGTCGACGTGACTCTGGCCTGCGAGGGGCAATCGATCAAGGCGCACAAAATGGTCCTGTCCGCCTGTTCGCCGTACTTTCAGGCTTTGTTCTACGACAATCCCTGCCAGCACCCGATTGTGATTATGCGCGATGTGCGCTGGCAAGAGCTGAAGGCCATTATGGAGTTTATGTACAAGGGTGAGATCAATGTCAGTCAGGATCAAATCAATCCGCTCTTAAAGGTCGCCGAAATGCTCAAAATTCGCGGCCTGGCCGAGGTTAGTTCGGGCTCGCCCGGTGTGGCTGCCCATCCCATGGTGCCGGAACAGCGCATGACTGTGTACGAGGATGATGAGGAAGACGACGGCGAAGATCGGAGTGGAATGCACGGTGGTCACCTCGACGAAACCGATCCGGACGGCTGCCGCAAGGCGAAACGCGCACGTGTTTTCGATGCTTCGTTGGACAAACTGCCCTCAGCACTGGACTTGAATGTGAGTGCGCAACGGCAGCGCAAACGTTCACGCGAGGGACTGCTTCTCGACGGTGGCACTGCCGAAGGGTCACAAACGGCACATTCGCAACACCATCATGCCGATACTGAGGGCATCGCAGGGGCTGCTGATGTCATGTCACCACCGCCTCCCATTGCCATGACCACTTCCACAATTGTGCGCAATCCATTCGCTTCGCCGAATCCCATGGGCTTGTCCAATGCCAGCGCAACAACTAATTCAACTTCATCGCTATCTTCGGGCTCGATCACATCAGCGTCGTCGACTTCGTCAGCTTCCGCTGGTTCGGCATATCGTCCCTCAGCCAGTTGTTCGCCCCTAATGCCGACGGCTCACACCAACGGCGGGGGCCAGTCGCAATCCTCACCATCCGGCAATagtggcggcggcggtggtgcTCACCAGTTGCCAGCACATTCCCATCCCGCTACGGCAGCTGCAGCAGCTGCGGCAGCATTGGCCAACTCACAGCATCCACATCATTCGCATCATCATCATGCGGCAGCCGCAGCCCAGCAATTGGCTGCCCAGCACCAACTTCATGCCGCTGCACATTCGCATGCTGCAATGGCCACGGCCCTGGGTGCATCCTTGGCGGCAGCAGCTGCTGGGGCAGGAACTAATACCGGCGGCGTTGGCGGTGGTACTGGTGGCGGCGTGGCTAATGCCACCTCAGCCATTCATCATGATGAGCTGGAAATAAAACcagaaattgctgaaatgatACGCGAGGAAGAAAGGGCGAAACTGATCGAAGGCGCACATCCTTGGATGGGTGGGGCCACCACCTCATCTGTGGCGGACAGCTATCAATATCAGTTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAATCAACAGAACCTCGTGCAACAGTTGAGATTTCGTGAGCGCGGCCCATTGAAGTCGTGGCGTCCGGAAGCAATGGCCGAGGCCATTTTTAGTGTACTCAAGGAGGGTTTGTCGCTGTCGCAGGCTGCTCGCAAATACGACATACCCTATCCGACGTTTGTGCTGTACGCCAATCGGGTGCATAATATGTTGGGGCCATCGCTAGATGGCGGCACCGATCCCCGTCCGAAGGCACGTGGACGACCGCAGCGCATACTGTTGGGCATGTGGCCCGAGGAGTTGATACGCTCGGTTATCAAGGCGGTGGTATTTCGAGATTATCGCGAGATCAAGGAGGACTTTGGTCACATCTACGCCAATGGACAAGCACATGGGCAATCACCCTTCGCTGCTTCGGGCAATACTGCTGCGGCCGCTAACGGTTATCACAGTGCTGCCAAATTGGCTGCTCAGAATGCCGCCTTAGTGCCCTCCGATTCGCCCAGTCCCCTGTCCACAATGACCGAAACTCTACGCCGTCAAATAATGTCTCAGCAGCAGCAATCGCCCATTTCGCAGACAATGAACATGTACAAGTCGCCGGCCTATCTGCAACGTTCGGAAATCGAAGACCAAGTCTCGGCGGCTGTAACAAAACAGCATGCGGAGCGCCGTGGTTCCGAAAATCTTCCCGATCTCAGCGCCCTGGGGCTGATGGGTATACCCGGCTTGAATGTGATGCCctcacagcagcagcaacagcaacagcaacagcagcagcagcgtaGCAATCAAATGCATCAGAATTCGGCAGCCTACTCACGCGACAGGGAACGTGAACGCGAAAGAGAGCAGCGTGAAAGAGAGCGCGATCGTGAGCTCAAAGAGGCAATGCAAGCACGTCAATATGGTAATCAATCGCGTGGCTCCGCCACTGGCAGTAGTGGCAGCCACAAGCAGCAAAGTGCTGGCAGTGGCGGCGTCGGTGCCGGTGTGGGCCCCTCGTCGGCCGGTGCCGTTTCACCTTTCCAGCATTTCAAGAACAAAGAACACCCCAACTACGCCTACAACAAACGCTTTCTCGAGAGTCTACCGCCGGGCATTGATTTCGAGGCAATTGCCAACGGCTTGCTGCAGAAGTCGGTGAATAAAAGTCCGCGTTTCGAAGACTTCTTCCCCGGCCAGGATATGAGTGAGTTGTTTGCGAATGCCGAGGCCGCTGCGAGCAGTGCCTCCTATCCACCCGTGCGCGAATCGCCTTTAATGAAAATCAAATTGGAGCATCAGGCCGCCGAGGTGCCGCATGAAGATTAA
- Protein Sequence
- MDMTKDIIDFTQKLEASSAFTNEPTVSNDHAIGECGTLTATTPVRADTPPPQSDDDHSPVTEPSIPGDIVGKASEAIRSTGDLSPPPRPLTSSAVVGLLTSAHDDDPDMRVDLPLPKSVSLPASPNHHLSTSSLMPHRTSALFEFGRATNAMPDIPKSTLEPLGGSHKSTLPTIKPKASTAAGASATGNQQFCLRWNNYQTNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIVIMRDVRWQELKAIMEFMYKGEINVSQDQINPLLKVAEMLKIRGLAEVSSGSPGVAAHPMVPEQRMTVYEDDEEDDGEDRSGMHGGHLDETDPDGCRKAKRARVFDASLDKLPSALDLNVSAQRQRKRSREGLLLDGGTAEGSQTAHSQHHHADTEGIAGAADVMSPPPPIAMTTSTIVRNPFASPNPMGLSNASATTNSTSSLSSGSITSASSTSSASAGSAYRPSASCSPLMPTAHTNGGGQSQSSPSGNSGGGGGAHQLPAHSHPATAAAAAAAALANSQHPHHSHHHHAAAAAQQLAAQHQLHAAAHSHAAMATALGASLAAAAAGAGTNTGGVGGGTGGGVANATSAIHHDELEIKPEIAEMIREEERAKLIEGAHPWMGGATTSSVADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDFGHIYANGQAHGQSPFAASGNTAAAANGYHSAAKLAAQNAALVPSDSPSPLSTMTETLRRQIMSQQQQSPISQTMNMYKSPAYLQRSEIEDQVSAAVTKQHAERRGSENLPDLSALGLMGIPGLNVMPSQQQQQQQQQQQQRSNQMHQNSAAYSRDREREREREQRERERDRELKEAMQARQYGNQSRGSATGSSGSHKQQSAGSGGVGAGVGPSSAGAVSPFQHFKNKEHPNYAYNKRFLESLPPGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFANAEAAASSASYPPVRESPLMKIKLEHQAAEVPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00797829;
- 90% Identity
- iTF_00797829;
- 80% Identity
- iTF_00797829;