Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: lov_1
Assembly: GCA_951394025.1
Location: OX596011.1:81436747-81450857[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-18 8e-15 54.8 0.0 1 44 809 852 809 853 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-18	8e-15	54.8	0.0	1	44	809	852	809	853	0.96

Sequence Information

Coding Sequence: ATGTTAAAAGATTCGGAGCAAATCATTAAAAGACGTAAGCTGTCGTTGATGCAGGCGACAGAAGACGACACatcgacgacgacgactacgCCGCCCATAACTCCACCAACTTCGATAaatatgatgatgatgacaacGGCCACGCATCCCACAGCAATCACACATTCAGCACCGCTGACAACGGCCACAAcgccaacaacagcagcacagGCAGCCACCTCAGCCTCAACTTCAACACCGCCCACAACACTCACGCCCACCACAATGGCCGCCACACTGCTGGCCTCCTCAACGGCCGTACAAGATCACTACAGCCTGCGTTGGAATAACCATCAAAATCATATACTGCGCGCCTTCGATGCTCTGCTGCAAACGAAGACGCTCGTCGATGTGACTCTGGTGTGCGCCGAGACCAGCATACGGGCACACAAGATGGTCCTGTCCGCCTGTTCGCCCTTCTTTCAGCGTGTCTTTGCCGAAACGCCGTGCAAGCATCCGGTCATTGTGCTGAAGGACTTTCGCGGTTGGGTGGTCCAAGCCATTGTGGATTTCATGTATCGCGGTGAGATTAGCGTGCCGCAAGAGCGTCTACAGACTTTAATACAGGCCGGCGAATCGCTGCAAGTGCGTGGACTCGTAGAGAGTTCTGTGCCCGAACATACGCCCACTCCAGCCGCTTCGCCCGATGATTTCGGTTCCATGATTGATACTTCGCTCATGTCTTCGGAGTTGGAGCGTTGCTCTAGCTTCGATGAGGAGTCTCCCTCAATGGTTACGGCCGGCTCAAAGATAATTCTACCCTCAAGGTTGTTTGGTGCGTCAGCGCGTCGCGAACGTGAACGCAAGCGCGAACGTGAGCTGGAGCGTGAGTTGGAACGTGAGGTGGAGGAAAGTGATCCGGAATTGCCGCACGAGTCGAGTGCTCACTCGGATCTGTGTACGTCTCCAATGCCCCGTCGTAAGCAGGCACGCCCAAGACGTCGTTCTGGCGAGTTGTCGCATGAATTGACCGTCAACAAGCCCACAAGTCCATTGCCTGCAGAAGGCACACAAGAAGAAGCACTCCAGCAACTGCAACAACCCGAAGATCCTCAAACCCCACCAATGTGCGTGGACAAAGAGAACTCTCAAGCTCAGGAACATTTGGATGCTTTCAATGCTGTGATCAAACGCGAATTGGCGGAACCCATGGATGACGATGATGTAGGCGGCGAGGGCAGGGAACACGACAGTGGCAATGATAGTCATGAGAACAACCAGTCACCCACGAATAATGTTAATAACGAATCGTCAACGAATTTAGCCTCAAATGAGCCCGCCCAGACTTTAGAAGAAGAGCACCATCACTTTGAGGGTGGCGATCACGCCCATGACATGGACgaagatgaagaagaagaggacGAGGATGAACACGAACCTGAAGACATTGAAGAGCTTATAAATAACTCGaatgaattgagacgcaaatcGCATTCCGGTCTGTCCGACGGTCCCGAGGATCTCTGCACAACGAAGAAGGACAACACCACAGACACAAGCGGTCATCACTCGGCCTCCGACAACGAGGGTAGTCCGGcgaacaacaataacaacagcaagttgaacaacaacaatcgaaTTGTGCTCTCGCTTAAGGACATACGCCACCTGAACAAGCCCTGCTCATCGTCCACGCCAAACTCATGCAACAACATGAATCCCTTTGCGGCCACCAGCTTACGCGATCTGAGGCTCGATCGCAGTGCTGTCGAGAATCAATGCAAAATGGAAGCCTTGGAAGCACAAATGCATGCTGCTGCGGCAGCCGCAGCTGCTGCCGCGGCTAATGGCGAGAATCCCTTCCAGCATATGGAACATCAGATGGATTTATCTTTGGCTGCAGCTGCTGCCGCAGCGGCCGTCTCACACCAGCAATCGCGCGAACGCGATCAGGCCATGCAGCGTGAACACCGTGAGATGCAGCAGCAACATAACGCCTATGCGAATAGTCTGCTGGGCCAGATGGGTATGGCGGGCATGCCGGGTCACTTTGGTCCGGGCAGTGGTGGTCCGGGCAGTGGTCAGTCGGCTCACGAACGACTGGAGGAGAGCATGAATCGCTTGAGCAAGGAGTTTACGCCCAGTTCACCCATGAGCCTGCCGTCACATTTTAATCCACCCGATGGGCAGCCGCATCCACCGTCACCGTTGCCCTTTCCTGGTATGTCATCGGCGTTGACTTTGACACCGCCACACATGTTTGGCCTGGACTCTCCACTAGGACTCTTTCCGCCAGGCATCGATCCCGGCAAACTATACAATCCGCTAATGGAAATGTCCGATCCGCGCGGCATGGGCGGTGATCCGCCACCATTTCTGAAAaagaaaaTGCCCCGTCCCAAAGGTCAACATTCGGCGCCACGTGGCGGCCCACCACGCTCTTGGACCAATGCCGAGCTCACCGAGGCCCTGCAGCACGTGTGGAATAAGAAAATGACCACCTCGCAGGCCTCACGAATATTCGGCATACCCTACAACTCGCTGCTGATGTATGTTCGCGGCAAGTACGGCAAGAGCTTGAAGCTCGAACAGCTGAGGAAGGATTGCATTAGTGGGCCGCCCTTAGAGCTGCTGCAGATGGGCATCAGTTCGGGTGGCTCGTCGAAAAATTCCAAGAAtcaacacaacaacagcaacgataaTGGAGAGGGTCGTGAGTCGCGCAAAGAGCAGAGGGGCAGCAGTAGTGCCGACATGGATATGAGTGGACCACTGTCaggtggtggcggtggtggtggaggCGGCAGTGTGGGTGGTCATGGCGGCCCACGCAGCGCCAGCTCAGAGCCCGATTTACTGGGCGGACacaattccatttttaatCCGTTCCCTCAGGGATTCTATCCCGAATTTCCGGGAGGCTTTCCCGGCTTGCCCTTGGGCATGCTGAATCTGTTGCCTCCATCGGAAAGGCATCAACATGCTGCGGCCGCCGCAGCAATGCATCATATGAGCGGCAGCTTGGATGAAGACTGCAAATCGGATCGCTCGAAGCAATCGTCAATGGATGAGGAGTTCAATGGCGGCGGTGTCTCGGCCGCTGCGGGATCTCAACAACCTTTGGCTTTGAGTCGTGACGAGCAGAGACGTGGTGCAGGCGAACTGCTGACCGGGGGAGCGGCAGCGGCCTCTTCCTCGGCCGCAGGGGCCCAACAAAATGGTCCGCAACAAGATTGA
Protein Sequence: MLKDSEQIIKRRKLSLMQATEDDTSTTTTTPPITPPTSINMMMMTTATHPTAITHSAPLTTATTPTTAAQAATSASTSTPPTTLTPTTMAATLLASSTAVQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGSMIDTSLMSSELERCSSFDEESPSMVTAGSKIILPSRLFGASARRERERKRERELERELEREVEESDPELPHESSAHSDLCTSPMPRRKQARPRRRSGELSHELTVNKPTSPLPAEGTQEEALQQLQQPEDPQTPPMCVDKENSQAQEHLDAFNAVIKRELAEPMDDDDVGGEGREHDSGNDSHENNQSPTNNVNNESSTNLASNEPAQTLEEEHHHFEGGDHAHDMDEDEEEEDEDEHEPEDIEELINNSNELRRKSHSGLSDGPEDLCTTKKDNTTDTSGHHSASDNEGSPANNNNNSKLNNNNRIVLSLKDIRHLNKPCSSSTPNSCNNMNPFAATSLRDLRLDRSAVENQCKMEALEAQMHAAAAAAAAAAANGENPFQHMEHQMDLSLAAAAAAAAVSHQQSRERDQAMQREHREMQQQHNAYANSLLGQMGMAGMPGHFGPGSGGPGSGQSAHERLEESMNRLSKEFTPSSPMSLPSHFNPPDGQPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMGGDPPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGISSGGSSKNSKNQHNNSNDNGEGRESRKEQRGSSSADMDMSGPLSGGGGGGGGGSVGGHGGPRSASSEPDLLGGHNSIFNPFPQGFYPEFPGGFPGLPLGMLNLLPPSERHQHAAAAAAMHHMSGSLDEDCKSDRSKQSSMDEEFNGGGVSAAAGSQQPLALSRDEQRRGAGELLTGGAAAASSSAAGAQQNGPQQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00797878;
90% Identity: iTF_00797878;
80% Identity: iTF_00797878;