Basic Information

Gene Symbol
kn
Assembly
GCA_951394025.1
Location
OX596011.1:65153037-65154892[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-119 2.1e-115 386.8 0.0 205 385 1 210 1 213 0.99
2 2 1.7e-10 1.1e-06 27.8 14.6 422 512 213 308 209 326 0.73

Sequence Information

Coding Sequence
ATGCGAAGATTTCAGGTTGTTATATCTACGCAGGTAGTAGTCGATGGACCACTTCTGGCCATATCTGACAACATGTTTGTGCATAACAATTCCAAGCATGGACGTAGAGCTAAGCGCTTGGATACTACGGAAGGTACAGGAAATTCCTCCCTGTCCATTTCGGGCCACCCCCTTGCGCCTGACAGTACCTATGATGGATTGTACCCACCCCTGCCTGTAGCTACGCCCTGCATCAAGGCCATATCGCCCAGCGAAGGTTGGACCACAGGCGGCGCCACTGTCATCATTGTCGGTGACAACTTCTTCGATGGCCTCCAAGTGGTTTTTGGCACCATGTTGGTTTGGAGCGAGCTAATCACTTCGCACGCAATACGAGTGCAAACACCGCCACGACATATACCTGGCGTGGTCGAGGTCACACTGTCGTACAAAAGCAAGCAATTCTGCAAAGGATCGCCGGGACGCTTCGTATATGTTTCAGCACTTAATGAGCCGACGATAGATTATGGCTTTCAGCGACTGCAAAAGCTAATACCGCGGCATCCCGGTGACccggaaaaattacaaaaggaAATTATACTTAAACGTGCAGCCGATTTGGTAGAAGCTCTGTACTCAATGCCAAGATCGCCGGGTGGCTCGACTGGCTTCAACTCGTACGCCGGACAGTTGGCCGTTAGTGTGCAGGATGGTTCCGGTCAGTGGGCCGAGGAAGATTACCAACGTCCGCAATCCAGCAGCGTGAGTCCACGTGGAGGCTATTGCAGCAGTGCATCGACACCACACAGCTCTGGCGGCTCGTATGGTGCCACCACAGCAGCAGCCAACGGCTATGGTCCTACGCCCAATATGGGCACACTTTCTTCATCGCCTAGCAGTGTTTTCAATTCTACATCTACTAGTGCCTTTTCGCCATTAATTTCAACAGTGTCCTCGCCTTGGCATCAGGCTTTAGTGCAACACCATCACACGCATCCGCATCATTACCATCATCCCCACCAGCCGTGGCACAATCCAGCGGTATCGACAGCAACTGCGGCGGTTTAA
Protein Sequence
MRRFQVVISTQVVVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWAEEDYQRPQSSSVSPRGGYCSSASTPHSSGGSYGATTAAANGYGPTPNMGTLSSSPSSVFNSTSTSAFSPLISTVSSPWHQALVQHHHTHPHHYHHPHQPWHNPAVSTATAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01132709;
90% Identity
iTF_01132709;
80% Identity
-