Basic Information

Insect: Heteromyza rotundicornis
Gene Symbol: retn_1
Assembly: GCA_951394025.1
Location: OX596011.1:12450202-12493887[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-26 1.2e-22 80.7 0.0 2 89 273 358 272 358 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-26	1.2e-22	80.7	0.0	2	89	273	358	272	358	0.96

Sequence Information

Coding Sequence: ATGGCAAAAGCAGAGAATGTGCCTTATTTCAAAtcaCATGATGACCATTCGGATGATGAAATGCGCGATTGCGATTCAGTGGATGGAGATCACATCAGTAGTAGAGCGGGACGTTTAAATTCAACAGTGGCCAGTAACGGCGGTGATATGAGTTACGGTGGTGCGGGCGTAGGCGGCGgtggaggaggaggaggaggtaaTGGTCGAAGTCCTGATCCCTCAACTGATATGCAAATGGGTCACCATCATCAATTCCCGCCAAATCATCCGCTCAATGCTTTGGGCAGCTTCATGGGCATAGGCGGTCTGCATGGCATTCCAAGTTTACAGCACAATGATGTGCTCGAAAAGTTAAAAATGCAAGTGCGCGATATGGAACAGGATTATGCCGCTGCAGCACATGCGGCCGCTTTCGGTGCAAATGTCTTGCCCACGCCCATCAATACCGCATTCACACTGCCGCCCACCACAATGTCGTCCTTCGGACATGCTGCACAAAATATGGCAGCGCACACGGTGAACGGTAATCTTGCCAATGGCAATTTAACAAACGCTCACAATTCCACAAATGCATCAGCGACGGCCGGAGGAGCGCTAACAAATGGCGGTTCTGttggtggcggtggtggtggcggtggcaATAGCAGCTTCTCATTTACATCACCAACAGCGCCAAGCACAAAAGACGTCAATCCTGCATCGAATTCTTCCACATCAAGTGAGGCTTCCAATTCATCACAGCAAAATAATGGCTGGAGTTTTGAGGAACAATACAAACAAGTCAGACAGCTTTACGAAATCAACGATGATCCGAAACGTAAAGAATTTCTGGATGACTTGTTTTCATTTATGCAAAAAAGAGgCACTCCCATCAATCGTCTACCCATAATGGCCAAATCCGTACTCGATCTATATGAATTGTATAACTTGGTTATAGCGCGTGGTGGCCTGGTCGAtgttatcaataaaaaattatggcaGGAAATCATCAAAGGACTGCATCTGCCATCGAGCATAACCAGTGCAGCATTTACACTAAGAACACAGTACATGAAATATTTGTATCCCTACGAATGTGAAAAGAAGAACCTTAGCTCGCCCGCCGAACTGCAAGCGGCCATTGATGGCAATCGTCGTGAAGGACGTCGCTCCAGCTATGGCCAGTATGAGGCCATGCACAATCAAATGCAAATGCCTCAAATGTCGCGTCAATCGCTCACCGGTGGCATGCAACAAATGTCGCCTTTGGCACTCGTCACACATGCTGCCAACAATCAGCAGGCTCAGGcagccgctgctgctgctgccgccgcTCACCACCGACTGATGGGACCGTCGTTCGGTCAAGTGCCAAATCTGGTGACGCACGAAATCGAACAGCGTATGATGGAGTACTTGAAGCTGATACAGGTGAagaaagagcaaaatgccgccGTGGCTAGTGGAGGTGGCGGCAGCATTGGAGCAGCATCccatcaacagcagcagcagcgtcaGCGTTCGCAGAGTCCGGAAATCACAACGCGTGAGGCCCTAAATGCATTGGAAATGTCGCGTGTGGCCTTGTGGCAAATGTATCACAATAATACCAGTCCCCCAGCCTCGGTCAATACGTCGCCGCAAGGTGGGGGTGGTAGTGCCAATGTTGGTGCGGGAGGCGCTGGTAATGGCCATGTGGAACCGCAACGCAGCGAAGCCCTGAACCTTTCCGATTCGCCGCCAAATCTCACCACAATTAAACGTGAGCGAGAACGCGAACCTTCGCCGGAACCGGAACGTGACGATTTTCACCAGCCACCGCCCGCCAAGAGAGTTGGCGCCAGCAGCAGTCTAATGCCACACGGATTCCCCGCCAGTTTCTATCTGCCACATGGCATGGCTGCCGCAGCGGCAGCGGCTGCAAATTTCCATCATGCCAATAATAGCAGTGGTGGTGCAATACACCACGACGAACGGCCCGACGATGAGGACGATGACAATGAGGAGGATGGCGAGCACAATACCACGGCCAATTCGTCACTACACGATGACAATGAGCGACAATTGAGTGGCCACCATAGTCATCATatgcatcatcatcatcaccatcacaataataacaacaacaacaacgataaGTCTGACGATTCTGCCATTGAGAATTCACCATCGACATCGGCCTCGGCGGGAAATGGACACATTTCGCCGGTGTCCACCAAGAAAATTCACTTGTCCAAGCAGCCGCAAATGAATTGTGGCAGTGAGGCGAGTGCAGTGGGTGGGGCGTCAATTAATCCCTTGGAGACGCTCAGTCTGCTGTCGGGCATGCAGTTTCGTGTGACGCGAAATGGCACTGGCGCAAATGGCGAACAACAACTAAGCGTAAATCTCGAATTAAATGGCATCAAATACTCGGGCGTACTTATGGCAAATGTCCAGCCCGCCAACAACACCAGCGCTGTCACCACCGACTGCAAACACAACAAAGACGATTCAATGGACACTGAAACGCAGAACAGTGGCGAAGGCGACGAAGCAATAGCCACTGAAACATCACCGAAggcgacaaaaacaaatgcagcTTCCGCTGGCATAACAAATGGTCCCAGCAGCGTGGTGCTGAAAGATGCGCTAATCACATCATAG
Protein Sequence: MAKAENVPYFKSHDDHSDDEMRDCDSVDGDHISSRAGRLNSTVASNGGDMSYGGAGVGGGGGGGGGNGRSPDPSTDMQMGHHHQFPPNHPLNALGSFMGIGGLHGIPSLQHNDVLEKLKMQVRDMEQDYAAAAHAAAFGANVLPTPINTAFTLPPTTMSSFGHAAQNMAAHTVNGNLANGNLTNAHNSTNASATAGGALTNGGSVGGGGGGGGNSSFSFTSPTAPSTKDVNPASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPQMSRQSLTGGMQQMSPLALVTHAANNQQAQAAAAAAAAAHHRLMGPSFGQVPNLVTHEIEQRMMEYLKLIQVKKEQNAAVASGGGGSIGAASHQQQQQRQRSQSPEITTREALNALEMSRVALWQMYHNNTSPPASVNTSPQGGGGSANVGAGGAGNGHVEPQRSEALNLSDSPPNLTTIKREREREPSPEPERDDFHQPPPAKRVGASSSLMPHGFPASFYLPHGMAAAAAAAANFHHANNSSGGAIHHDERPDDEDDDNEEDGEHNTTANSSLHDDNERQLSGHHSHHMHHHHHHHNNNNNNNDKSDDSAIENSPSTSASAGNGHISPVSTKKIHLSKQPQMNCGSEASAVGGASINPLETLSLLSGMQFRVTRNGTGANGEQQLSVNLELNGIKYSGVLMANVQPANNTSAVTTDCKHNKDDSMDTETQNSGEGDEAIATETSPKATKTNAASAGITNGPSSVVLKDALITS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -