Hrot007446.1
Basic Information
- Insect
- Heteromyza rotundicornis
- Gene Symbol
- grh_1
- Assembly
- GCA_951394025.1
- Location
- OX596011.1:1140108-1170155[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.28 3.7e+03 -2.5 2.2 91 115 171 195 155 214 0.58 2 2 8.9e-31 1.2e-26 94.0 0.1 27 153 623 745 608 749 0.91
Sequence Information
- Coding Sequence
- ATGGGCCACTCACTGGTGCGCGCTTGCTCGAGTCAAAAGTCGCACGCTAGTAGGCAGGCACTTGCGGGCTGCCGTAGCAGCTTCAATTGCTTGCTTGTTTGTGTGCCGAACTTGTCCGGTAGCGGTAGTTGTAGCAATGGAGCCGATGACGAAGTGCAGCGCGGCTACAAATATTTGCTGAGTTACAAAGCGGCGAAACCAGTGAGATTTCGACGCCGCACAGTTCTGACCAATGTGGATTCAGTGCCATCATCACCACCACAACCACTGCCCATGACACTGTCGACGACCAGCAACAGTCCCGATCAGGTGATCATTCAGCATCACAATGGTTCGTATCAGTTGCCTGCCACATCGGTGTCCTCGCGGTACTACGAGCATCCGCAGCTGACCACAGTGGTGTCGGCCGCAACGCCCCAAACCCTATTGAGCCTTTCACCCACCGACACAGCAGCCCATCCTCATGCCCAGTCAGACGATCAAAGccatcatcagcagctgcatcagacgcaacagcaacagcaacagcagcaccatcaacagcagcagcaacaacaccagcagcaGGCTCAACATTTGGTTGAATCGGCCGCCACGACGGTAAACCTGGGAGCTTTGGGCACCGCACACCAAGTGCATCAAGTGCAGACGCCCAATGGTGGCACCTCTTTTGTCTATGAGTACTACAAGGTGCCCGACAAGGAGCCAGACAACGAATTGCAGTGGAGCGCCACAACAACCGGCAACAAGTTGAACGGGCAGACCACACCTCTCGACGTATCTGGCCTATCGCAGAATGAAATCCAAGGCCTGCTGCTTGGTGCACACccatcgtcggcggcggcgtcAGGTCCAACGACTACGACCATTTCACAGCAATCGGCCATAGTGACGGGCGGCGGCGGCACGGCAGTTGTCGTTACCGCCGACCAGCAACGCCAACATCATCAACACCAgcagctacaacaacaacagacaaTCAGCATCAAACGCGAACCAGAGGATCTACGCAAGGATCCCAAGAACAATGGCGGTGGTGTAGTCGCTATTGCCACCAACGGCAATGTCAGTGCCGGACAGAAGGTCTTAGTTGTGCAGTCGCCATCGCCATCGCAAATACAAATCAAAGAGCCACCACCCAGTCCTGGAAGTCCAAACACTGAGACAATGTACGCTGCCGGCGGCGGCACTCAAATTTACCTTCAGggTCCACATCAAACCAGCTCGGCGGGCACAGGTGCCTCCAATGTGAACACACAATCACCCAGTCCGGGCCCGTACATCACACCCGATGGCTATGGCATGTACACCACCCGCCTGGCCACCGGACCCACATCCACATTCATCTCGGAGCCATATTATCGCGAATACTTTTCCACCGACGGCCAGGGTGGCTATGCACCCGCACGCACGGTGTACGGCGAAAGCGAAGGACCCCAGCCGGGCACTACGTACGAAGGACGcttcaccaccaccaccactaccAGCGCACAGCCACACATCTCAAAGAATGGCACGCCCATCTATGCGAAGACCGTTACGGCGGCTGGCCTGACTGTCGACCTGCCAAGTCCCGATTCGGGCATCGGAGCCGATGCCATTACGCCGCGAGACCAGAACAACATCCAACAGTCCTTCGATTACACAGAACTTTGCCAGCCAGGTGCTCTACTGGAGAATAATGGCGCAATTCCAGTGTCTGTGAACAGCATACAGCGGGCGACGGTGAGCGTACACGGCGGCCAGAACAGCCCGACTACATCGCTGGGCGGCACCAGCGCCAATGGAGCTACTCGATCAAGGCCATGGCATGACTTTGGACGCCAGAACGATGCGGACAAGATacaaataccaaaaatATTCATAAATGTGGGCTTCAGATATAATCTTGAGAGTCCAATCAGCTCGTCACAACGAAGAGAAGACGACCGTATAACGTACATCAATAAAGGACAATTCTATGGTATAACGTTGGAGTATGTGCCTGACCAGGATAAGCCCATCAAGAATACAACAGTTAAGAGCGTCATTATGCTAATGTTCCGCGAGGAGAAAAGTCCCGATGATGAAATCAAGGCCTGGCAATTCTGGCACAGTCGGCAGCATTCCGTCAAGCAAAGGATTCTGGACGCAGataCGAAAAACTCTGTTGGCCTGGTCGGCTGCATCGAGGAAGTTTCACATAATGCCATTGCCGTCTATTGGAATCCTTTGGAAAGTTCTGCCAAGTTATTAATGAAACTGTGTGGAGACAGTCGCGGCGCGGCGCGGCACACACGTATGCGCATGCGCAACCAAACCACTCCACCGCTCAGTACAGTAGCGAAGCAGATTAATGCGAGCACCGTTTGCAGTCAATGa
- Protein Sequence
- MGHSLVRACSSQKSHASRQALAGCRSSFNCLLVCVPNLSGSGSCSNGADDEVQRGYKYLLSYKAAKPVRFRRRTVLTNVDSVPSSPPQPLPMTLSTTSNSPDQVIIQHHNGSYQLPATSVSSRYYEHPQLTTVVSAATPQTLLSLSPTDTAAHPHAQSDDQSHHQQLHQTQQQQQQQHHQQQQQQHQQQAQHLVESAATTVNLGALGTAHQVHQVQTPNGGTSFVYEYYKVPDKEPDNELQWSATTTGNKLNGQTTPLDVSGLSQNEIQGLLLGAHPSSAAASGPTTTTISQQSAIVTGGGGTAVVVTADQQRQHHQHQQLQQQQTISIKREPEDLRKDPKNNGGGVVAIATNGNVSAGQKVLVVQSPSPSQIQIKEPPPSPGSPNTETMYAAGGGTQIYLQGPHQTSSAGTGASNVNTQSPSPGPYITPDGYGMYTTRLATGPTSTFISEPYYREYFSTDGQGGYAPARTVYGESEGPQPGTTYEGRFTTTTTTSAQPHISKNGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGALLENNGAIPVSVNSIQRATVSVHGGQNSPTTSLGGTSANGATRSRPWHDFGRQNDADKIQIPKIFINVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVPDQDKPIKNTTVKSVIMLMFREEKSPDDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKLLMKLCGDSRGAARHTRMRMRNQTTPPLSTVAKQINASTVCSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -