Htit016224.1
Basic Information
- Insect
- Hetaerina titia
- Gene Symbol
- znf423
- Assembly
- GCA_037158775.1
- Location
- CM073769.1:24723347-24731201[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.15 1.3e+02 6.0 5.9 1 23 3 25 3 25 0.98 2 18 2.7e-06 0.0023 20.9 3.1 1 23 31 53 31 53 0.99 3 18 7.1e-06 0.0059 19.6 0.2 1 23 59 81 59 81 0.99 4 18 0.00033 0.27 14.4 3.2 1 23 133 155 133 156 0.95 5 18 0.071 60 7.0 0.4 1 23 290 313 290 313 0.91 6 18 0.031 26 8.2 0.2 3 23 508 528 507 528 0.99 7 18 0.023 19 8.6 0.0 2 20 600 618 599 622 0.89 8 18 0.00018 0.15 15.2 0.2 3 23 636 657 634 657 0.94 9 18 0.027 23 8.3 0.3 1 23 662 685 662 685 0.93 10 18 2.2 1.8e+03 2.3 0.0 1 23 692 717 692 717 0.91 11 18 0.33 2.7e+02 4.9 2.3 1 23 754 776 754 776 0.96 12 18 0.16 1.4e+02 5.9 0.2 1 23 780 803 780 803 0.94 13 18 0.00035 0.29 14.3 1.8 2 23 885 907 884 907 0.95 14 18 0.0097 8.1 9.8 0.4 1 23 919 942 919 942 0.92 15 18 5.3 4.5e+03 1.1 0.1 2 23 1009 1030 1008 1030 0.94 16 18 0.092 77 6.7 0.1 1 23 1126 1149 1126 1149 0.95 17 18 0.0027 2.3 11.5 0.0 1 20 1242 1261 1242 1264 0.95 18 18 0.0031 2.6 11.3 2.3 1 23 1271 1293 1271 1293 0.97
Sequence Information
- Coding Sequence
- ATGCCATTCCGATGCGAGTTCTGCAGCCGACTCTTCAAGCACAAGCGCAGTCGAGACCGGCACATAAAGCTGCATACGGGAGACCGGAAGTATAGGTGTACGCAGTGCGAGTCTGCGTTCTCACGGAGTGACCACCTCAAGATCCACATGAAGACTCATGACAACCAAAAGCCATTCCAGTGCACGGTGTGCAACCGTGGGTACAACACGGCGGCTGCGCTCACCTCGCACATGCAGTCGCACAAGAGGGGCGGCGGGAGGAATGGCGGTGGAGGGAGCACGCCCAGTCCGGGCCCCACGGTCTTGCCGACGTCCCCCGCCCCCAAGGCCGCCTCCACACCCACCTCGGAGGCGGCCACCGGGCGGAGCAGCTCCGGGAGCCGCGGGTCGAGCCCCCACCGCTGCACCCATTGCACGGCGGGCTTCCGGAAAGCGGAAGACCTGCAGGCCCATATGGCTCTGCACCACTCCGCCGGAATCCAGGCGCCTTCACCGGTGCACGCGGAGACGCCGAGGCCCCGGGGGCGCCCACCGTCGTCCTCTCTCCTACCCCCACGCAGCTGCTCAGCCTCTATTCCGTCGCCGGTGGCAGTGGCTCCCAAATTGGCCTGTATCTACTGCACCAAGGACAGCTTCACCACTATGGAAGGACTACAGCTTCATGTCCAAGCAATGCACGGATCGATCCTGAATGGAGACCTGAGAGAGTTGGCGGCCGCCGTGGGAGTCGTGGGTGCGCTGCCCCATCTCGGCCCCACTCCTGTTCCACCCCCATCCAATCTCAGTCCTCGCCTGCCCTCACCCACCACATCATCCTCCTCAACTAtgcccccctcctcttcctccgcctctctccaCCTCTTGCCCTTCTCCTGTGAATTCTGCACCATGCGCTTCGACGCTCCGACGGCTCTCCACAAGCACGCTTTAGCCGTCCACGCCGTTCCCGCAGTACTAGGGTCTCAGGCAGCAGCCCTGTCCGGCCCTACCTTGCATCCTCTCCACTCCGCCCACCACCTCCGACACCCCTTTCCCTTCGTGGCCGCCTCCGCCCCGCCTCCTTCCCTGCCACCGCCTCCGccacccgcccccctcccgcctcccccatcTCTGCCCCCAGAGCAGGTCCGGCCCACAGATCTTAGCAAGAAATCCTCCGAGTCCAGGTCCGAATGTCCAGAGCCTCCCCGCGCACACGAGAAGGCCCAGGACTATATGTCTCGGTCGAAGCAGGATTACCATAGCATCAAGAACCACGTTGAGAGCAAGATGAAGATCCAAGACTACAGCCTCCCGAATTATCCCAGCCATCGTTTACTTCAGCAGCAAGCCCACCAATTTCTCCACGCAGCTGCCAAGTCCCCACCTGACTTCCTCTCCTTCGCCAAGAGCCTGAGAGATTTGCAGGCCTCAGTTTCAAAAGCAGACTTCTCAACGCCGAGAAAGGCACCCGCGGTTGAACCCAAGAGGCAAAGGACCCCGCCGGAAGGCGAACCTTCCTCTTTAGCTGGGACACTGCTTTGTAACCAATGTGACGCGGCTCTGCCTGATTTCGAGTCCTTCCGATCCCACCTGAAGACCCATCTGGAGGACGAGGAGGCGGCAGCTAGGGCAGCCGCCTCTGGAGGCGCGCCCCCGTCAGCCCCTGGAGCCGGTGGCTTCACCCGGCGCCGTTCCCGCAAGAGTAACCCCCACCCCCGGAGCGGTGGGATGAGCGGGAGCGGGTCCCCCGGGATGACGGTGTCCGCCGCCGGACCGTCCCCTCCTGCCGCGTCTCCGCCTCCCAACCGCCGGACGAGGTGCCCCGAGTGCGATGCGGAGTTCTCGACCGAGGCAGAGGCTGAACGGCACGCTGTGGCAGCACACTTCCAGCTCTCTCCCAACGGCGGGGCATCCGAGTTCGGATGCCAATCTTGCGGCCGGAGGTTCCCCAAACCGGACGAGTTGCAGAAACACCTGATGGATCTGCACGCACACCACCTCTACAGATGTGCCCTGTGCAAGGAAATGTTCGACTCGAAAGTGTCCATTCAGGTTCACTTCGCCGTGAAGCATAGCAACGAGTGCAAGCTGTATCGCTGCGCCGTCTGCGCTGACTTGACACCCTTCCGTTCGGAGCCCGAGTTTGTCGCACACGTCCGCAGCGTTCACCTCCTTCCAGCTTGGTCCGGGCAAAGGCGACACCATTCCCTCCAGCGACAGCCTCCTATTACATCGGAAGCGCAGCAAGCCTGCCCGCCGACAAACGGTGTTGCCCAGTTCCGGTGTCTCTTCTGCCACCTCAGTTTTCCATCCGAACTGGAGCTCCAGTTCCACCTGACCACGCACCGTAAGGAGTTCAAGTGCGTCCTCTGCGAGGAAGCCTTCCACGTGGAGTTCCTCCTGGACCGGCACGTCATGGAAGCTCACCGAGGTCACATGACCAACGGAATGACCACCACCGCCGCACCCACTCCCCCAAGACAAGAGAAGCCCCTGGCAAGGACGACCCCCAAGAAGACCTCTGCCCCTTCGACACCCACCTCCCCTCAGCCGGCCGCATCCGCTCTGCCGAACGGCAGGCCGGCGGGCAAGGACGATGAGGCGGCCACTCGGGCCGCTCAGGCAATCGGGAACCCCCACCCCGCTCACCAAGTGGCAGTGGTGAGCCTCCAGTGCGCCTACTGCAACGAGCGCTGCAAGTCACGCTCCGAGCTGGAAAGCCACACGCGCGCGATGCACTCGGCAGCTGTCGGTGCGACCGCGGGTGGGGCTCATAAGTGCGTCATTTGCGACGAGGTGTGTGCCACTGCTGTGTCCCTGGCAGAGCATAAGCTAGCCCGTCATTGTAAGGTCCCGGAGGGTAGCGGATGTTGCGTCTGCAAGGCGCCGATTGGCGGGGAGGACGAGTTCCATGCCCATGTCAGGAGACACGCCACTTCTGGGAATAATCGCGGGGGTAACGGCGCTTCGGCGACTGCGGCCTCCTCGTCCTCCTCAACGTCCTCGTCTTCATCATCATCTCCACCGCCCCCTCTGCCCACGCCGTGCGTGGTCTGCAGGCAGACGCTCGTCTCGGAGGTAGAGGTGAGGATGCACGCTAGGTTCCATCTGAGGCGGAGAGGTTCGTCGTCGGCGGCGGGTCTGGACCAGCAGGCCCAGGCGCCACAGCCGTCCGCCTCGGAAGCCCCCTCCCAGGCGGACCCGCAGCAGGTGGCGGGTCGCGAGAGGAGGAGCTGCTGTGTCTGCCTCCGCCCTCTCTCCGACGAGGAGGTGGTGGAAAGCGGGGTCGAGGAGGGCTTCCCTGCGGTCTGCACCGAGTGCAGGGTCCTCTGCGGGGCTGCGGCTGGAGGTGGGGCGTCGAGAGGGGTTCCCGGCGACGATGACTCTGGCCCATATCAGTGCATAAAGTGCCAGCGTGGATTCCCCACCGAAAGGGAAATTCGTGCCCACGTCCTCTCTGCACACCTCCTGGACGTCGGATCTCACGCCGGCAACTGCAGCAGTGGGGCCGTAGGAGGGGCTGGAATGGGCAAGGGTGCTGTTAGCGGTGGCTTGGGTGTACCCCCCGCCTCCTCCGACCTTGCCTGCCACCTTTGCTCCCCACCTTCCGAGTGGGACTCTCCCCTGCGACTGCAGGCTCACCTCATCGAGCACTCCTTCGGTGCCGCAACAGTGGCCAGCGGAGGTCGGGACTCATCAGGCGGCGGGGCGGCCGGCTCCGTCGTTTCCGGGGGCTCGAACTTCTCCTGCTACCTCTGCGGCGCCGTATTCACCGCTGCGGCCGGCCTGCAGAGGCATATGCCTGGTCACGGACTGGCGCAGAGGCCTTACGACTGCTCCCGGTGTAGCCTCCGCTTCTTCTTCCGGTCTGAGCTGGAGAACCACATGTTTTCCCACCGAGACGACGAGGACGAGAGACAGAAGGGAGAGTCGGAAGGGGGAGTGGTGGACGAGCAGGCCATGGACCTGGGTGCCAAGCCTAGGACAGTGCCGAAGGTTGAGGTCAAGGAAGAAATGGAACCGGAAGAAGGCGTCGCGGAACCGTGTCCTTCGGAGTCGATGGAGACGGAGATGCAGCTGAAGCGAGAGGGCGATGAAGTGGAACAGGAAAGCACTGAAACCGATATGTACGCTCGCGAAGGTGAAACTGGTGCGGCTCAGGCGAGGGACGCCGAAGACGCCACTGCAGATGGGAGCGAGACCGTTGCAGCTAGGAAACGGGCAAGGGTTGATGGAGGCGAAGAAACGTCGCCTGCGACCAAAAGGCGCCCGGAGTCTCCGCTGGACGTTGACTGTGAATCATTCGCCGACAAGTGTGCGAATTACTCTTAG
- Protein Sequence
- MPFRCEFCSRLFKHKRSRDRHIKLHTGDRKYRCTQCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQSHKRGGGRNGGGGSTPSPGPTVLPTSPAPKAASTPTSEAATGRSSSGSRGSSPHRCTHCTAGFRKAEDLQAHMALHHSAGIQAPSPVHAETPRPRGRPPSSSLLPPRSCSASIPSPVAVAPKLACIYCTKDSFTTMEGLQLHVQAMHGSILNGDLRELAAAVGVVGALPHLGPTPVPPPSNLSPRLPSPTTSSSSTMPPSSSSASLHLLPFSCEFCTMRFDAPTALHKHALAVHAVPAVLGSQAAALSGPTLHPLHSAHHLRHPFPFVAASAPPPSLPPPPPPAPLPPPPSLPPEQVRPTDLSKKSSESRSECPEPPRAHEKAQDYMSRSKQDYHSIKNHVESKMKIQDYSLPNYPSHRLLQQQAHQFLHAAAKSPPDFLSFAKSLRDLQASVSKADFSTPRKAPAVEPKRQRTPPEGEPSSLAGTLLCNQCDAALPDFESFRSHLKTHLEDEEAAARAAASGGAPPSAPGAGGFTRRRSRKSNPHPRSGGMSGSGSPGMTVSAAGPSPPAASPPPNRRTRCPECDAEFSTEAEAERHAVAAHFQLSPNGGASEFGCQSCGRRFPKPDELQKHLMDLHAHHLYRCALCKEMFDSKVSIQVHFAVKHSNECKLYRCAVCADLTPFRSEPEFVAHVRSVHLLPAWSGQRRHHSLQRQPPITSEAQQACPPTNGVAQFRCLFCHLSFPSELELQFHLTTHRKEFKCVLCEEAFHVEFLLDRHVMEAHRGHMTNGMTTTAAPTPPRQEKPLARTTPKKTSAPSTPTSPQPAASALPNGRPAGKDDEAATRAAQAIGNPHPAHQVAVVSLQCAYCNERCKSRSELESHTRAMHSAAVGATAGGAHKCVICDEVCATAVSLAEHKLARHCKVPEGSGCCVCKAPIGGEDEFHAHVRRHATSGNNRGGNGASATAASSSSSTSSSSSSSPPPPLPTPCVVCRQTLVSEVEVRMHARFHLRRRGSSSAAGLDQQAQAPQPSASEAPSQADPQQVAGRERRSCCVCLRPLSDEEVVESGVEEGFPAVCTECRVLCGAAAGGGASRGVPGDDDSGPYQCIKCQRGFPTEREIRAHVLSAHLLDVGSHAGNCSSGAVGGAGMGKGAVSGGLGVPPASSDLACHLCSPPSEWDSPLRLQAHLIEHSFGAATVASGGRDSSGGGAAGSVVSGGSNFSCYLCGAVFTAAAGLQRHMPGHGLAQRPYDCSRCSLRFFFRSELENHMFSHRDDEDERQKGESEGGVVDEQAMDLGAKPRTVPKVEVKEEMEPEEGVAEPCPSESMETEMQLKREGDEVEQESTETDMYAREGETGAAQARDAEDATADGSETVAARKRARVDGGEETSPATKRRPESPLDVDCESFADKCANYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01212863;
- 90% Identity
- -
- 80% Identity
- -