Htit099011.1
Basic Information
- Insect
- Hetaerina titia
- Gene Symbol
- Zfpm1
- Assembly
- GCA_037158775.1
- Location
- CM073776.1:99137177-99156560[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.7 1.4e+03 2.7 0.4 2 23 5 26 5 26 0.93 2 14 1.8e-05 0.015 18.3 0.4 1 23 906 929 906 929 0.95 3 14 0.0004 0.33 14.1 0.7 1 23 934 957 934 957 0.98 4 14 5.9e-06 0.0049 19.9 3.8 2 23 960 981 959 981 0.97 5 14 1.7e-05 0.014 18.4 1.0 1 23 987 1009 987 1009 0.99 6 14 1.2e-05 0.01 18.9 6.3 1 23 1015 1037 1015 1038 0.96 7 14 0.87 7.3e+02 3.6 2.4 5 23 1051 1069 1050 1069 0.97 8 14 0.0011 0.96 12.7 1.5 3 23 1076 1097 1075 1097 0.96 9 14 0.0062 5.2 10.4 0.2 2 23 1113 1133 1112 1133 0.97 10 14 2.7e-05 0.022 17.8 0.1 1 20 1139 1158 1139 1161 0.94 11 14 0.005 4.2 10.7 1.1 1 23 1169 1191 1169 1191 0.99 12 14 0.0036 3 11.1 4.4 1 23 1197 1219 1197 1219 0.97 13 14 1.3e-05 0.011 18.8 4.6 1 23 1225 1247 1225 1247 0.98 14 14 5.5e-06 0.0046 20.0 2.2 1 23 1253 1275 1253 1276 0.96
Sequence Information
- Coding Sequence
- ATGGATCCAAATGTGTGTCCAGTCTGCACGCTCTATCTTCGGGAGGGCATCACGCTGCACAATCATCTTAATACTCACCCGAAGGACCAGGTTATTGAAGCTTTGGTGAGGTGTGCATCTCTTGGTGTGCCCGGTTCAGTcaggaatgaaggaaatgaaagtgtTCAAGATCCTATAACTGCCGCCGCTCAGCCCAGTATCGAGACTTCTACGACACCTGTTCATCACTTCTCGAACCCCGTACAGACTCTTACATCTGTACCGCCTTCAGGATCTGTCCAAACAAATGTTCTTCAGCAGGTGGTGACAGCTTCGCCTATTGTAGCTGCAGCAATTCCCCCAGTCCCAACTGGAGAGAAAGCCGAGAGAGGGATGAGCGATGGTGGCAGTCAAATTCATGGACCGCGAGAAGAAATAATTACGGATGAAATACAGGAGCAAATAGAGTATACCCCGAGAGACCGGACGGGAAGCTTGGACCTGTCTCATCCTGCTCATGATTTGGGAGCTCTTCAAAGTACAGCTCCCTCTTCCAGTGGTCGGGTGGCCATTAAAAATGGCTCTGTTCCTCTGGAAGTTGGATCGCCACACCAACGAGTCAACCGGCGTGGGAGACCCAGAACTAAATCCATCACCAAGGGTCCCCATGCTACACGCCAACACAGTCACAGCAGtacaaatagaaatattatttcctctctgCCAGGAATGGCACACATATCTCAAGGAAGTGGTAAGGTAGGGCCAAAAAAGCTCCTGAATAAATTGCACCGGTCAAAGCAGTTCAATATGTTGGAGGGTGTTAATACAGCTTTTGAAGAGAGCAGTGGTGTAATTgatggaattttcggtggtagtTCTAACCATCCTGATAAATCAATgtttgaaaaaccaaaaaaacagTACTCACCAAAACTCCATGAAAATCTAGAGGCAGTTGAAAATGGTGTGGAACTCAAACACAATGGAGATTCCCAGAGGGTTGTGCGCAGTCCCATGAATGAAGCTGCAGAAGAAGTGAAGGATGGCTGGGCTGATTTCTCTTTGTTCCCTCAAAGCGGGAGCCCGGCCATGAGCAACCACGGAGCTACCACGCCTGCAGCCCAGGAAGGAGACCACGATGACCCAGACGACGATCACTTCCAGTCGGATGCTTGTTTTGAGAGCGATGGCGTCGAGAACCCCCAATATGACCCTCTGAAGAGTGTTGACAGTAAAAATGACgaagagatggaaataattgtTCTCAACCAGTGGGACACTGTTGGGGAGAAGAGCAATGGTGAGGATGCCCCTGCGGAAGACAACGTGCCCAATGTTATTCTAGAAGGTAGTGGTTCTGATAAGAACAAGAGGGATGCCAGGGAAAGTGGACCGGAGGGTTTTCCAGCAGAGCAGAAGGAGTATGAGAGCAATGAGGAGGCGCACAACACGGAGTGCTGGGTTCCAATGCCAGAGGCCGAAGATGTCCAAGAAGTGAAGGAGCAGAGGTTTGAGTCGCAGTCATTGGTGGCCAATGGAAATGTTCTTGTGGTGGGCCATGGGGAGGGCGAGGCCTCGGTGGAGCCAAGCCACGAGGGGAGGTGCTCACCCGAAGGCAGGTCGAGCTTGCACGAATGCAGGCCCGTGGTGCTGGGGGATGGGTGCATGGGGGGGGGTTCAAGTGTGCACCCAGCTGGCGCCAGCATTCACCCTGCCCCAGGGGACACGGAGGACGCTCTACCCGCCCCACCAAGCCCTGTGAACATCTTTCAGATTGATGGCATGAACATCATTCTCTCCTCACGACTGATTGAGCAGACAGACAAGATGAGGGAGAGGTTGGGGATCTTCGAGGGCTTAGGGCCAATGGCAGGCAGCTACGGGGACATCTCCATCCCGGAAGGGATACTGGAGGAAGAGGGCCTCGTGGTGTCGGACATCATAGCTGATGAAGCAATGCCACCCAGGGGTGAACTCTCTGGCCAGGAGGGCATGGGCAGTGGGAGCAACTGCAGTGATGCTGGCCCCATTGAAGAAGACCCATTGGGCAAAACTGAGGGAACCACTGTTTGGACATCCGGAGGATTTTCTAACTGCGGCACAAAAGACCTGTTTTGTGGTTCTTATGGTTCTTCCCATCATGGCTTATCTTCCCGCAGACAGCAATCTTATAGTCAGCTTTTCCCGGCTTCTGCCCGCCAAGGTGGGGCGCAGTGTGACCTGCTGCCTGGGGGTGAATCATGGTCACCAGTGGAGGGGTTCCAGGGCAGACAAGAACCCACTCTGCCTTCCGTCACTCCAGAAACAGTGCCAAGGAAGAAGCCACGTACCAAGAAAAGCACCACTGTAGGGGGTGCTTCAAAGGCTGCCACGGACTCTGCAACTAAGACAAAGACCAAGCGGCTGTACCACTGCTGGACTTGTTTGGAAGTTTTCAACTGTCCCAAGGAGAGGAGGGTCCACCAGCGGGAGAAGcatgggggggagaagggcttGGGTACGGTGACCCCCACCGACGGCTCGCTCATCTCTCCCTCCCAGGTCGAAGAGCAGCCGATGCCAAGCTTGGCATCGGCTGCCGAAGTGGCCGGTCAAGTGGTCAAGTCAGAAGTGAAGGAGACCAAGGTGGAGCCCAGGGATCCTTTGGAAATCGACATCAAGGAACCCAAGGTGCCCACCGAAATCGAGGAGGACACGAAGGAACTGGGAAATGTCAACGCTGCCAAATTGACTCATCCCTGCACCGACTGTGATCGCTCTTTTCCCTCCGTACGATCTCTCACCGCTCACCGCAGAGCTGCTCACAGAGACTCCAGGTTCAAGTGTCCCACTTGCTCCGAGAAGTTCCTCACGTCGGCAGATTTCACCAACCACGTCCGAACCGTTCACCCCCTGGAGTGCTCAATGTGCGGCAAGCAGTTCTGCAGGCAGCAGAACCTCCGCCTCCACCTCAAGAGGCACCTGAGCGTGCGCCCCTACAAGTGCACCCAGTGCGACAAGGCTTTTGTGACCAACCAGAAGATGGAAGAGCACCTCAACTCGCACACGGGGCGCACCCCCTTCCAGTGCCCCCTCTGCCCCAGGGCCTTCCGCCGCCACAGCAACCTCATACAGCACCGCAAGCACCATCACTTGAAAGTCAAGCGCAAGGTGAGAGACTTCTTCTGCCACTGTGGGGCCGTGTTCCATTCCGTCAAGAAGCTCGAGTGGCACAAGGAGACGCACGAGGACAAGCCCAAGGCTTGTCCTCACTGCAGTGACCGATTTGTGCACCGTGCAGGCCTCACGCGGCACATCAGGCAGGCCCATGATCGGCGCTACGTGCCGTCGGGGGCACGGGAGGATGTCAACGTGGAGTGCCCCGTTTGCTCGGCTGTCTACCTCAAGTCCTCCCTCCACATCCACATGAGGGTGCACTCGGGAGAGCGCCCCTTCTCGTGTGGGATCTGTGGAAAGGGCTTTGCCACCAAGTGGAATCTCCAGCTGCACCGCTGGGTGCATGCCAGCCCCCACTCCAAGCCCTTCAAGTGTGCCACCTGCAAGGCGGCATACCACCGGAGGGTCGACTTCATTGCTCATGTCCGCTCGCACAGGAAGGTGCGACCATATGTGTGCAACACGTGTGGCCGCAGATTCATGCGCAAGTACAACTGCGTGCGACACTCGCGTGAGCACGAGGCGGGGAAGGCATTCGAGTGCACCATTTGTCAGAAGCGTTTCCACCGGCGATATTATTTGAAGGAGCATCTTAGGATCCATACTGGCCTTAGACCATATGTGTGCCATGTTTGTGGGAAGGCATCGGGTACTAAATCAAACATGAACAAGCACGTTCGCATTCATCATGCGAGGGAACCGGTCAACACTGAAGGTTAA
- Protein Sequence
- MDPNVCPVCTLYLREGITLHNHLNTHPKDQVIEALVRCASLGVPGSVRNEGNESVQDPITAAAQPSIETSTTPVHHFSNPVQTLTSVPPSGSVQTNVLQQVVTASPIVAAAIPPVPTGEKAERGMSDGGSQIHGPREEIITDEIQEQIEYTPRDRTGSLDLSHPAHDLGALQSTAPSSSGRVAIKNGSVPLEVGSPHQRVNRRGRPRTKSITKGPHATRQHSHSSTNRNIISSLPGMAHISQGSGKVGPKKLLNKLHRSKQFNMLEGVNTAFEESSGVIDGIFGGSSNHPDKSMFEKPKKQYSPKLHENLEAVENGVELKHNGDSQRVVRSPMNEAAEEVKDGWADFSLFPQSGSPAMSNHGATTPAAQEGDHDDPDDDHFQSDACFESDGVENPQYDPLKSVDSKNDEEMEIIVLNQWDTVGEKSNGEDAPAEDNVPNVILEGSGSDKNKRDARESGPEGFPAEQKEYESNEEAHNTECWVPMPEAEDVQEVKEQRFESQSLVANGNVLVVGHGEGEASVEPSHEGRCSPEGRSSLHECRPVVLGDGCMGGGSSVHPAGASIHPAPGDTEDALPAPPSPVNIFQIDGMNIILSSRLIEQTDKMRERLGIFEGLGPMAGSYGDISIPEGILEEEGLVVSDIIADEAMPPRGELSGQEGMGSGSNCSDAGPIEEDPLGKTEGTTVWTSGGFSNCGTKDLFCGSYGSSHHGLSSRRQQSYSQLFPASARQGGAQCDLLPGGESWSPVEGFQGRQEPTLPSVTPETVPRKKPRTKKSTTVGGASKAATDSATKTKTKRLYHCWTCLEVFNCPKERRVHQREKHGGEKGLGTVTPTDGSLISPSQVEEQPMPSLASAAEVAGQVVKSEVKETKVEPRDPLEIDIKEPKVPTEIEEDTKELGNVNAAKLTHPCTDCDRSFPSVRSLTAHRRAAHRDSRFKCPTCSEKFLTSADFTNHVRTVHPLECSMCGKQFCRQQNLRLHLKRHLSVRPYKCTQCDKAFVTNQKMEEHLNSHTGRTPFQCPLCPRAFRRHSNLIQHRKHHHLKVKRKVRDFFCHCGAVFHSVKKLEWHKETHEDKPKACPHCSDRFVHRAGLTRHIRQAHDRRYVPSGAREDVNVECPVCSAVYLKSSLHIHMRVHSGERPFSCGICGKGFATKWNLQLHRWVHASPHSKPFKCATCKAAYHRRVDFIAHVRSHRKVRPYVCNTCGRRFMRKYNCVRHSREHEAGKAFECTICQKRFHRRYYLKEHLRIHTGLRPYVCHVCGKASGTKSNMNKHVRIHHAREPVNTEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -