Htit087775.1
Basic Information
- Insect
- Hetaerina titia
- Gene Symbol
- -
- Assembly
- GCA_037158775.1
- Location
- CM073775.1:66331816-66340483[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0019 1.6 11.9 0.0 1 23 512 535 512 535 0.93 2 10 0.039 33 7.8 4.4 1 21 549 569 549 571 0.94 3 10 1.2e-05 0.01 18.9 3.5 1 23 646 669 646 669 0.94 4 10 8.9e-05 0.074 16.2 0.6 1 23 764 787 764 787 0.95 5 10 1.1e-05 0.0092 19.0 2.6 2 23 821 842 820 842 0.97 6 10 1e-06 0.00084 22.3 0.5 1 23 848 870 848 870 0.98 7 10 6.1e-05 0.051 16.7 3.6 1 19 876 894 876 899 0.91 8 10 6.2e-08 5.2e-05 26.1 0.7 1 23 905 927 905 927 0.99 9 10 7.7e-07 0.00065 22.6 2.3 1 23 933 955 933 955 0.99 10 10 2.6e-07 0.00022 24.1 1.0 1 23 961 983 961 983 0.97
Sequence Information
- Coding Sequence
- ATGGAAAATCCTGAGAGGTCAGGCGAGTTAATGACGAACGTGCAACTTGTCTCTCACCTTAATGAAGAGGTAAAAATAGTACATGATGGAGTGAAAGGTAGTCGAGAGGTTGGTCTCATATCTTCACATGATGTTGGCTCACAGTACATAACCATTCATCCCGAACCTAGTATTTCTAAGGAACCCCAAGAATCTTTGGGTGATTGTGATTCGCAGTCCGACACTTTGACAGCCTCAACTCTGTCCGGAAATGGAGGACAAGGAGAAGAAATGCTTGCTCACGTTGTTCAGATGCCTTTGGGCCAACACGCCCTTGTTGAGATTATGGAAGCTGTTCCCAGTGAAGCGAGTAAGAATCAGCCACATGCTTCATCACAGCTTAAGGAGACTGCTTATTACACCACAGTTCCTAGCAGTGGAACTTCTGTCAGCAATCGCGTGACACTCCTTAGTCCTGTTTCTGCAGGGAATACTGACCACCACATCCAACACCATTCCGTGCATCACAGTACTGAATCTTTGCCTGTCGTCTCGCGGGCCTACATTCCAGATACAGATGGTATGGTTGTGGCCACCAGTAGTCATTACAGCGAAACAGCAACAACGGGGGTGGTAGAGGAAGACATATTAACGCATGACTTGACAGATGATGATCGAAGATTAGCCGCTGCTTTAGTTGCTGTTCAGTTAGTGCAACAACAAAAACAGCAGCTTCATCAACAGCAACTGCTGCAGCATTTGCCAGTTTGTGTTTCTGATTCCACAAATGTCATAATGAATACTGCTGAAATTCAGGGATTGATTGGAGTAGGCAAGGGTCTCCACCCAGAAGACACTCATGTTGTGGTCACCACTGATAAACCAGTGTCGTCCGCCATGGTAGCAGATTATATTCAGGCTGTGGAAGATGGTAGTGTTGTGAGTGGCAATCATGACAAAGCTGATGAAATGGTAGTTTCTTCTCCGCGTATTCGAACGAGGGATGTGGATGGACCTTATGGTCAACCTCATCAGGATGACAATACATATGCAAAACTTCATGTCATCCTGCCACACCCAAAAAAGGCCATTATGGGGCACGGTTCCGCTGTTCGTAATCGACTAAAAAGGTTTCGGACTGAAATTGAAGACTCTTCCGTTGTGCATATGTTAGATACTAACTCTCCAGTAGTTGATGGCGTTCAGTATGTCACCGTATCAAATTTAGGGACCACCTTAAAAAATGAACACGGGGAGGTCATGGAAATGATGGAGGTCGGTGAGGAAGCAGATGAATTGGGCGAGGGGATTGTTGAAGAGGGAGACGAAGAGGAGATATTGGAGGAGCTGGAGGACGAAGATGAACTGGAAGAGGTTTGCACAAGAGAAGATCTTGAAGCTTTAGATTATGAAACGGGGGCCTCCGAGGGCATTCTGGGCCCCTCCGATCGAAGCTTGCCCCATAAAAAGAGGATCCCACCTAAACTTAAGGGAAACACCTTGGTCATGGACAGCGACGAGAAAAAGAAACTCTCCCAAGTCCACGTGAAGTGCTACAAATGTGAGATCTGCGGTGAAGGACTGGCCTCCCAAGGTGACTACGAGGCACACAAGGAGCAAATGCACCCGCAGGAACAATCCATCGACGGTGTTAAGAAGAACCCATTCACATGCCTGCTCTGTGGCCAGACGTTCCCTAGCCAATTCAAGTTCTTCGAGCACCTCAAGTGTCATTACGAGCCCCTGCTCGAGAACGACAACTCCCAGAGAAAAGTCAAAGAGGAGGACACCGAGGTGAAGCACGAGGACGAACCCCTGAGCCAAGTCGAGGGAGTGGAGATGACCCTGGTGGACGACGGCCACCACAGCGTAAATCGTGCGCCGGAGGAGATGGCTCAGAAAGAGATACACATCATTCACCATCAGGAACAGCCCCCTGGCGTGGAACTGCCGGCCTTCCTGTGCACCCACTGCAACAAGACATTCCGACGACAGAAGGCTTACGAGACCCACATGAACCTCGTGCACGGCCCGGAGGATGAGGACGACGAGGAGGAGCAGCAACAACAACACACCATCACCCACGGGACTGTCATGGAGGAAACAGTAGTCGTCTCCAAGAAGGACCAGCAGACCGATTGGATGCCGGAGTTCCTCGGAGacgatgacgatgatgatgacgacgagGAGGACGACTGGGCGGACAACGACGTGCTCGACCGCCCCGTTCGGCGCCGCCAGCAGCACTCCGGAAGTGGCGATGCCACCAACGACGGCACTGGTGACGGTCAAGGCATCGGACTCCATCACCACGTCTGCGACATTTGCGGTGGCGCCTTCCAGAGCAGGGCCCAGCTGAACCACCACATGCAGGAGGAGCACCCGGATGCGGCGCACTCCGGGAACCAGAGGAAGAAGGCGAGGAAGGGCGGCGGTGGATCCGGCGGGAGTGGCGGTAGCGCCCGGAAGATAGAGCACATGACGTGCTCCACTTGTGGTCGTGTCTTCAACCACCGAAACTCCCTCGTCTATCACATGCGGAGCCATACGGGCGAGCGCCCCCATCAGTGTGAGGTCTGTGGTAAGAGTTTCTTCGCCGCAAGTGCACTCAAGGTGCACATGCGACTCCATTCGGGCGACAAGCCGTACAAGTGCGAGTACTGTGGCCGCCACTTCCGCCAGTGGGGTGACCTCAAATACCACTGCATCTCCATCCATTCGGACGAGAAACAGTACCAGTGTGAGTACTGCGGGAAGGACTTTGCACGCAAGTACAGCCTGATAGTCCACAGGCGAATTCACACTGGGGAAAAGAATTATAAGTGTGACTTTTGTGATAAAAGCTTCCGTGCCTCAAGCTATCTTCAAAACCATCGCCGCATCCACACAGGGGAAAAGCCTCACCCATGTGAAGTATGTGGCAAGCCATTCCGTGTGCGCTCTGACATGAAGCGGCACATGCAGACGCACAACAGGGAAACAGTCCAGACCATGACTCCCCACCCGCAGGCAGCAAATGGGGGCCCAGCTATGGCCTCTGATGGTGATCCATCTCCACCTCCAGACAGCCAGGATCACCAAGTTCGCCATTCCAGCCTGACAGGGTCCCCACACCACCACAATATTGACCCATCTGGCAGCCTCCTAGGAACTGAACTGGTTGCGACCACGGACACCAGCAAAAATGAGCAGATTAcagaggaagaggtggagagtATCTTGCCCGACGATGGTCTTGGAAACCACCAGACCGTGACAACAACTGTGACCTCGGCTCAGCACACCGTCTCACAGCATGTTTCCACCCAACCCATTGACTTGAACTTGGTTCCAGGGAGAGCGGGCGTGTCAATCCAACAGAGTCACCTGTCGGCTGCAGTAACAGAGCAGGTTGTTCAGGAAGTGCTCCATTATGCCAGGGACCCCCTTGAACAAAGGGACACACCCAACATCTATGTGTGGCCCATATACATGTCATAG
- Protein Sequence
- MENPERSGELMTNVQLVSHLNEEVKIVHDGVKGSREVGLISSHDVGSQYITIHPEPSISKEPQESLGDCDSQSDTLTASTLSGNGGQGEEMLAHVVQMPLGQHALVEIMEAVPSEASKNQPHASSQLKETAYYTTVPSSGTSVSNRVTLLSPVSAGNTDHHIQHHSVHHSTESLPVVSRAYIPDTDGMVVATSSHYSETATTGVVEEDILTHDLTDDDRRLAAALVAVQLVQQQKQQLHQQQLLQHLPVCVSDSTNVIMNTAEIQGLIGVGKGLHPEDTHVVVTTDKPVSSAMVADYIQAVEDGSVVSGNHDKADEMVVSSPRIRTRDVDGPYGQPHQDDNTYAKLHVILPHPKKAIMGHGSAVRNRLKRFRTEIEDSSVVHMLDTNSPVVDGVQYVTVSNLGTTLKNEHGEVMEMMEVGEEADELGEGIVEEGDEEEILEELEDEDELEEVCTREDLEALDYETGASEGILGPSDRSLPHKKRIPPKLKGNTLVMDSDEKKKLSQVHVKCYKCEICGEGLASQGDYEAHKEQMHPQEQSIDGVKKNPFTCLLCGQTFPSQFKFFEHLKCHYEPLLENDNSQRKVKEEDTEVKHEDEPLSQVEGVEMTLVDDGHHSVNRAPEEMAQKEIHIIHHQEQPPGVELPAFLCTHCNKTFRRQKAYETHMNLVHGPEDEDDEEEQQQQHTITHGTVMEETVVVSKKDQQTDWMPEFLGDDDDDDDDEEDDWADNDVLDRPVRRRQQHSGSGDATNDGTGDGQGIGLHHHVCDICGGAFQSRAQLNHHMQEEHPDAAHSGNQRKKARKGGGGSGGSGGSARKIEHMTCSTCGRVFNHRNSLVYHMRSHTGERPHQCEVCGKSFFAASALKVHMRLHSGDKPYKCEYCGRHFRQWGDLKYHCISIHSDEKQYQCEYCGKDFARKYSLIVHRRIHTGEKNYKCDFCDKSFRASSYLQNHRRIHTGEKPHPCEVCGKPFRVRSDMKRHMQTHNRETVQTMTPHPQAANGGPAMASDGDPSPPPDSQDHQVRHSSLTGSPHHHNIDPSGSLLGTELVATTDTSKNEQITEEEVESILPDDGLGNHQTVTTTVTSAQHTVSQHVSTQPIDLNLVPGRAGVSIQQSHLSAAVTEQVVQEVLHYARDPLEQRDTPNIYVWPIYMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00261382;
- 90% Identity
- iTF_00261382;
- 80% Identity
- -