Basic Information

Gene Symbol
ZNF236_1
Assembly
GCA_037158775.1
Location
JAVFHJ010000014.1:4323585-4410238[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 3.8e-06 0.0032 20.5 0.9 3 23 222 242 220 242 0.97
2 24 0.00035 0.3 14.3 1.6 1 23 248 270 248 270 0.97
3 24 0.00042 0.35 14.0 0.1 2 23 282 303 281 303 0.96
4 24 6.1e-05 0.051 16.7 0.1 3 23 311 331 309 331 0.97
5 24 0.00043 0.36 14.0 1.4 1 23 391 413 391 413 0.97
6 24 5.5e-06 0.0046 20.0 3.0 1 23 436 458 436 458 0.98
7 24 4e-06 0.0033 20.4 1.1 1 23 464 486 464 486 0.98
8 24 4.3e-05 0.036 17.2 0.3 1 23 492 515 492 515 0.97
9 24 0.0018 1.5 12.0 2.6 1 23 525 548 525 548 0.96
10 24 1.5e-07 0.00013 24.9 1.4 1 23 728 750 728 750 0.98
11 24 6.3e-06 0.0053 19.8 0.7 1 23 756 778 756 778 0.99
12 24 9.6e-07 0.00081 22.4 2.0 1 23 784 806 784 806 0.98
13 24 0.0027 2.3 11.5 3.8 1 23 812 834 812 834 0.98
14 24 0.00061 0.51 13.5 2.8 3 23 928 948 927 948 0.99
15 24 3.9e-05 0.033 17.3 1.2 3 23 956 976 954 976 0.98
16 24 2e-06 0.0017 21.3 0.3 1 23 987 1010 987 1010 0.96
17 24 0.0033 2.8 11.2 13.6 1 23 1302 1324 1302 1324 0.98
18 24 0.0029 2.4 11.4 0.8 1 23 1330 1352 1330 1352 0.99
19 24 7.4e-06 0.0062 19.6 0.5 1 23 1358 1380 1358 1380 0.96
20 24 0.00012 0.099 15.8 0.8 1 23 1387 1409 1387 1409 0.99
21 24 5.2e-08 4.4e-05 26.3 2.1 1 23 1556 1578 1556 1578 0.98
22 24 1.6e-05 0.013 18.5 1.2 1 23 1584 1606 1584 1606 0.97
23 24 9.8e-06 0.0082 19.2 2.0 1 23 1621 1643 1621 1643 0.98
24 24 7.3e-05 0.061 16.4 2.9 1 23 1649 1671 1649 1671 0.99

Sequence Information

Coding Sequence
ATGGACGCACTTGGTCACTCCGTTACATTCCCCGTCAACGAGATGCTCCTCACTGACGAGGGCGCAGCCTCCGACTCAGTGGTGGTCAACGAGATGGGTGCAGGTGGGCAGCAGTCGTTTGTCTTCTCGTCGGAAGGGGGCACTGCCacgctcctctccctcccgtttGCCCTGCTGCATGACTCGGGGCTCGCCACTCTCCCCACGAGCACCACGGGCGGTGCCAGCACGGCCGCCCAACCGATCGGGGGCACCAACACCACCAACATCATCATCAAGCAGTCGGGCTCGTCGGTGCAGCCTGGATTGCCTACCAACACCATCTTCCTGGATGCGGCACAGATGGCACTACTGTCTTCGGGTGAAGGGCAGGTGGTACTCACTGATGCCTTCCTCGAGGAAGGTCAGCAAGGTGCGGAGGGACAGCAGATATTCTTCCAAGTGACAAGCGATGCGCTTCATGAAGAAGATGAGACCGCAGGGCAGAAGGACGACAGTGCCATGGTCCAGCAGAGCGGGATACCGCTGAATGACATTCGCGGTAGAGGTCAGAACATTGTGATACCAGAGAGGAGGCCAGTTCTTCCAAAGGCGAAACGCGGCCCAGGAAGACCAAGGAGAGATGATTCCAAGATGCCTCCATCAGTGAAGGGTGTGTGGTTCTGTCAGTCCTGCGGGAAGGAGTTTAGCAAGTGGCCCCTGCTGAAGAAGCACATGAAAACACACTCGGACGACAAGCCTCATCGGTGCTCACATTGTCCTGCTTCCTTCAACGTTCCCTGGAATCTCAAGCTTCACGAATCGACGCACGTCAGCCCAACATCGCCCTCTGGTGGTCCCCTCCGCTGCCCAGCGTGCACACGCACCTTCTCGAGGATTGCTTCGCTCAAGGCGCACGTTATGCTCCATGAGGAAGACGAGTCGCTCTTCTGCACTGTGTGTGGTGAGGAGTTTAGCACCCAGGGAGCCCTGGATGAGCACCTAAGGATTCACGATTTGGAGGCCCGCAACGTAGACCCCCTGGCCGACGACACGGCACCTACGGTTGGACTGGAGAATGCGGTATGGCTCCCTGATGGTTCGGCCCATTTTGGCGATGCGGTTCACTCCTTTGTTTCGACCGATCAACAAGTCGTGAGTGGTATGCTGACTGACTCACCCAGGGCCGGACATCGATGCCGGCTCTGCAACGCCATCTTCCGCAAGGCCGGCCAACTGCGGGAACACATGAAGGAACACTCAAAGGTGAAGGCATCACTGTTGCGGCGCAACCACAAGCGAAACATAGACCGGTCGACGTTCCTTCACAAGTGTAAGAATTGCAGTAAGGGGTTCCAGAAGCCGAGCCAGTTGGTGCGGCACATGCGGATCCATACGGGAGAGAGGCCCTATAAGTGTTTGACCTGCGACCGGGCCTTCAACCAGAAAGGTTCACTCCAGATCCACATGACAAAGCATTCGGGGGTCAAACCGTTCACCTGTGAGTTCTGTTCAGCTGGATTCCGACAAAGAGGAAACCTGAGGGCCCACATCTTAAGGGTTCACACAATCCCTGTGAGCGGTGAGCAGGCTTTCCGTTGCTGCGAGTGCCCCTGCGTCTTCCGCAAGCTTGGTTCCCTGAATGCGCACGTGAGCCGTGTTCACGGGCACAGCACGTCGTCGGCCAACGGATTGTCGCGCAAGAGAAAGAGAGCTGATGGGAGCACGGTGGGCGACTCGTTGGATGACGATGTCTCGGATGTGCTCAAGGACCTTGCAGAGTTGGAGGAGGCGACAAGGGGACTTGGGGGAGGAGTCGGGAACACCGATGGAAGGACTCAGGATTCGGTACGCAGGGTACCACACATAGGTGTGGTAGGGGAAGGATTGAAGGATTCCGTGGGGGAAGGACCACATCCATCGGACATCCTCCAGCAGGCTTTGGAGAAGAGTGGACTATCTGGGAAGAAAACCGGCGCCGTCTCTGAATCTCCCCACCAGGAGGCAGGCCTGGTCCAGATGAAGGCAACGGTTGCCGAGAGAACGGAAGAGGATGGCTCTCTGCCCCTGGATGCCATTGTTGCCACCGATTCGAACCACAGCACGTCACATTCGTGCGTGTTGACCCTGGCAGACAAGGCTCATGACGGGACAGTGAGgCGGTACAGCATCAAGGTGAGGCGTTTAGGAGGCGTGAGGTGGCACCAGTGTACGTACTGCCCCAAGGAGTTCAAGAAGCCCTCGGACCTAGTTCGGCACATTCGAATCCACACCCACGAGAAGCCATACAAGTGTAACATGTGTTTCCGGGCATTTGCCGTTAAGTCAACATTGACGGTTCACCTTCGAATCCACTCGGGATTGAAGTCGTACGAGTGTTCAACTTGCAAGAAGAAATTTGCCTCGCAGTCTTCACTCAAAGTTCACCAAAGGTTGCACTCAGGACTGAAGCCATTCTCGTGCCCCTACTGCAGCTTGCGCTTTCGAACCACTGGTCACCGCAAGACGCACATATCATCCCACTTCCGCGTGCGTTTCCGGACGTCTAAGAAGCAGAGGCAGCGAATGGAAGAGCAGGCGGCCAAGGAGGACATTAGGAGAGTCTACTTACAAGACCCGATTGTTGTACAACAGCCACAAGAGGAAATACCCGCAAACACCCAAGAGAGCGGTGATGACCCAAGTCCTGTTTTACAAGAAGGGGAAACTGTGGCACCGGAAGGGGGAGAGGTTGCGGTTCCAGAGGCAAGGGGTGCGCAAGATGAGATGCGtgtggtgataatggacaaccgaCCCCACGGCTGCGAACACTGCCCTGCTGCGTTCAAGAAGTTTGCGCACCTTAAACAACACCTGCGTTCACATACTGGAGAGAAACCATTCGGATGTACAACCTGCAACAAGGCATTTGTGTCGAAAAGTGTGCTGAAATCTCATCTGAAGACGCACGTACCTTTCATGGCACCTTCGAGACGTCCCTATTCATGCAGCGAGTGTGGGCGCAAGTTTGTTGCGTCGAGTAGCCTCAAGAGGCACATGATCAACGCGCACGAGAACCTCCGAAAGAaacTGCTGAAGGAGACCTTCCTCTGTCCGTATTGTAGTTGTCCTCCCTTCAACTCGAGCCGCGCATGCCGCAAACACATACTTACGCACACGGGCGAACTGCTTGAGGCACTGGAACGCGAGGTGGAACAGGAGAGAGCGCAGGCAACTGCGCAACCGGAAGGCGGTAACGAACAAGTCGGAGAGGTTCAACCGCCACGTCCCATTTTGGTTTTGGACGGCACGCAACGGGTCGCGAACATGCGTCTTGAAAACGGAAGAATACCGGAAGGCACGCAGCTTGCCGTGGTCCCCAAGGGCCAAGAGAACGAACCCATCCACAAGGAGACGGCATCGGAACCGGTTATGGAGGATTGCGAGACGGACAATGTGGTTGTTACGTTTTCGCTTGATTTCCCAGCGACGGACGCTCTCGGGAGACAGGTTATCAATCACCAGGTGTCCTTGGATGGCCAGGAGGAGGATGGCGCAGGTACCCAGACGGTGGCCACAATCTCATTGGCCGACACCGATGGTCTAAGCCAGATTGAGCAGTCTCTGAGCACTGGGATGTTTGGGGAAGCCATTGAAGCTGGTGCTGGTGCTAGCAGCACCACAGTTGAGCACCACGGTACCCAGGAAGCCATCAAGGATACTGGGACAGCAGCCTTGGACCTTCACGCCATCTCTTTCGATCCGTCTGTCTTCTCCAACATCACCCTTCCTCCGGGTGAGTCTTTGAACCTTCACGCATCACTTCAACCGATGGAGGAGGATGGCATTGCAAACCCTGTGCCAGAAGCGACACCGGAAACCGCAGACCGCTTGGAAGAAGGTGATGACAAGGATGACGAGTTACGTGGGCGGAAGAAGAAAGTACAcaaGTGCACGTTCTGCCATCGAATCTTCAAGAAGTGTTCCCACCTGAAACAACACTTGCGTACGCATACAGGGGAGAAGCCATTCCAGTGTCTCGTTTGCATGCGAATGTTTGTCACGATGGGAACTTTAAAGGCTCACTTCAGGACACACACGGGAGAGAAGTCCTTTGCGTGCGAGACGTGTGGGGCCCACTTCACAACCAACGGGTCCCTCAGACGACATATGATCGCACACTCGAACGAAGGGCGCATTTTCCAGTGTGAGAGGTGCCAACAGGGCTTCCGGACGGTGGGGAACTGGCGTAGACATTGGCGCTCCCACGAGAAGGAGTTGATTGGTTCCCGGGGCCCTGGGGCGACTGAGAGGTCGGAGGATGGGGAAGCAAGGCAGGCGGAGGGAGTAGTGGCCGAACTGGAGTCTGTGGCTGAAGGGGCTGGAACTGGAGTGGTGGAGGAGGGAATGAAGCAAGGTCAAGAGGTCGTTGAGGCACCAACACCACAAGAGGCCCCAGTCAATTTCAAGAGGATAGGCTTGAAAAGGAGGAATGGCACAAGCAGTGGGGTCGGTGCCACAGCCGGGATCAGCGGTGGCGTGATTCGGCTCAGCGAGGAAGAGACGACGCGGTTGGCGATGCAGAGTCCATCACAGCCGCACTTGACGCTCTCGGAACGGGTGCTCATAGCATCGGCCGCGGAGAGGGAACGAATCAGCGAGATCAACGACAAGCAGAGACAACTCCAACTTGCGCCCAAGCTCCCGCACGTCTGCCCTCACTGTCCCAAGAGTTTCCGCAAGCCGTCGGACCTTGCGCGCCACGTACGGACGCACACGGGAGAACGGCCCTTTGCGTGTGACAAGTGCGGTCGTCGTTTCACCGTCAAGTCGACCTTGGACTCGCACCGAATGACCCACCCTCTGGAGGACGGGGATGGAAGCTTGTTATGCCACCCCAAGTATCCTTGCCACGTTTGCGGTTGCCTGTTTGCCACAAAGGGGAGCCTTAAGGTCCACATGAGACTACATACCGGCGCAAGGCCGTTCAAGTGTCCGCAGTGTGAGCAGCGTTTCCGTACATCCGGGCACCGCAAGGCTCACCTCCTTACGCACGTTCGATCCCAGCAGGCGCTTGGGATTGCAGTTGTCGGGGGTGTTGCGCGGGAGGCtgctgggaggaggggaaggggtcggaGGGCAAAGACGATGGCGCTGGAGGCTATGCGCACGATAGACGAGGCCCTGAGGGATGCAGCGGCTGAGTGCGCACAGGAGGGGGCCGGTGTGACCAACACGACGACGGCGGGTGACGAGGAAGAGGTCGGCGGAGGTGTGGTGGACTGGGCGACAACGCTGCACGCAAACCTTGCGGCAGCTGGGGGAGAGGAAGGTGCTGGCGTTGGCAGTGCTGGAGGAGGGAAGGCGACATTCGTCCACCTGGGTCAGCTGGACGATGGTCTCATTCTCGGACAGGTGCCGCAACATCCCCTTGATGACGACGAAGATGCAAACGCAAGAGGTGGTGGGAGCATTGCGGGCCAGAGACTTGCCAACGTTGGTGCTATCGACGCTGTTGCCACTGGGGTAAAGTTTGTTCCCCTCTTCAAAGTGGAGGGCGTGGTGGAGTCCCTCTCATTCGAGGGGGGAGATGAAGTGGGTGGTCTGTTCGGAGGTCAATCACTGGAGGTCATCCTTGAAAACAAGTCGCAGCACTTCCGAGGGGTCAAAGGGATGTCCTCAAAGGGCGATGTGGCCGAGGAATCGACCTGGGGGTCGGAGAGCAACGTGAGGGGTCGCTCCCTTGGTGTCCTCGACGAAGAGGGCAACATAAGCCTCGTCATCGATGGGGACTTTGTTATCGAAGAGGACGGCACGCTACGGCAGGTCGTCGGTGGGGAATGTGTTGTCCTTTCCGGTTTGGGTCGGTGTGATGATGGGAACAGTGACCAGGTCATCGACGAAGGGCAGCGATGA
Protein Sequence
MDALGHSVTFPVNEMLLTDEGAASDSVVVNEMGAGGQQSFVFSSEGGTATLLSLPFALLHDSGLATLPTSTTGGASTAAQPIGGTNTTNIIIKQSGSSVQPGLPTNTIFLDAAQMALLSSGEGQVVLTDAFLEEGQQGAEGQQIFFQVTSDALHEEDETAGQKDDSAMVQQSGIPLNDIRGRGQNIVIPERRPVLPKAKRGPGRPRRDDSKMPPSVKGVWFCQSCGKEFSKWPLLKKHMKTHSDDKPHRCSHCPASFNVPWNLKLHESTHVSPTSPSGGPLRCPACTRTFSRIASLKAHVMLHEEDESLFCTVCGEEFSTQGALDEHLRIHDLEARNVDPLADDTAPTVGLENAVWLPDGSAHFGDAVHSFVSTDQQVVSGMLTDSPRAGHRCRLCNAIFRKAGQLREHMKEHSKVKASLLRRNHKRNIDRSTFLHKCKNCSKGFQKPSQLVRHMRIHTGERPYKCLTCDRAFNQKGSLQIHMTKHSGVKPFTCEFCSAGFRQRGNLRAHILRVHTIPVSGEQAFRCCECPCVFRKLGSLNAHVSRVHGHSTSSANGLSRKRKRADGSTVGDSLDDDVSDVLKDLAELEEATRGLGGGVGNTDGRTQDSVRRVPHIGVVGEGLKDSVGEGPHPSDILQQALEKSGLSGKKTGAVSESPHQEAGLVQMKATVAERTEEDGSLPLDAIVATDSNHSTSHSCVLTLADKAHDGTVRRYSIKVRRLGGVRWHQCTYCPKEFKKPSDLVRHIRIHTHEKPYKCNMCFRAFAVKSTLTVHLRIHSGLKSYECSTCKKKFASQSSLKVHQRLHSGLKPFSCPYCSLRFRTTGHRKTHISSHFRVRFRTSKKQRQRMEEQAAKEDIRRVYLQDPIVVQQPQEEIPANTQESGDDPSPVLQEGETVAPEGGEVAVPEARGAQDEMRVVIMDNRPHGCEHCPAAFKKFAHLKQHLRSHTGEKPFGCTTCNKAFVSKSVLKSHLKTHVPFMAPSRRPYSCSECGRKFVASSSLKRHMINAHENLRKKLLKETFLCPYCSCPPFNSSRACRKHILTHTGELLEALEREVEQERAQATAQPEGGNEQVGEVQPPRPILVLDGTQRVANMRLENGRIPEGTQLAVVPKGQENEPIHKETASEPVMEDCETDNVVVTFSLDFPATDALGRQVINHQVSLDGQEEDGAGTQTVATISLADTDGLSQIEQSLSTGMFGEAIEAGAGASSTTVEHHGTQEAIKDTGTAALDLHAISFDPSVFSNITLPPGESLNLHASLQPMEEDGIANPVPEATPETADRLEEGDDKDDELRGRKKKVHKCTFCHRIFKKCSHLKQHLRTHTGEKPFQCLVCMRMFVTMGTLKAHFRTHTGEKSFACETCGAHFTTNGSLRRHMIAHSNEGRIFQCERCQQGFRTVGNWRRHWRSHEKELIGSRGPGATERSEDGEARQAEGVVAELESVAEGAGTGVVEEGMKQGQEVVEAPTPQEAPVNFKRIGLKRRNGTSSGVGATAGISGGVIRLSEEETTRLAMQSPSQPHLTLSERVLIASAAERERISEINDKQRQLQLAPKLPHVCPHCPKSFRKPSDLARHVRTHTGERPFACDKCGRRFTVKSTLDSHRMTHPLEDGDGSLLCHPKYPCHVCGCLFATKGSLKVHMRLHTGARPFKCPQCEQRFRTSGHRKAHLLTHVRSQQALGIAVVGGVAREAAGRRGRGRRAKTMALEAMRTIDEALRDAAAECAQEGAGVTNTTTAGDEEEVGGGVVDWATTLHANLAAAGGEEGAGVGSAGGGKATFVHLGQLDDGLILGQVPQHPLDDDEDANARGGGSIAGQRLANVGAIDAVATGVKFVPLFKVEGVVESLSFEGGDEVGGLFGGQSLEVILENKSQHFRGVKGMSSKGDVAEESTWGSESNVRGRSLGVLDEEGNISLVIDGDFVIEEDGTLRQVVGGECVVLSGLGRCDDGNSDQVIDEGQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-