Htit096232.1
Basic Information
- Insect
- Hetaerina titia
- Gene Symbol
- -
- Assembly
- GCA_037158775.1
- Location
- CM073776.1:63122213-63144093[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-11 3.4e-07 32.5 0.0 2 39 230 268 229 272 0.91 2 4 7.4e-10 1.3e-05 27.5 0.0 1 38 287 324 287 330 0.89 3 4 3.8e-16 6.7e-12 47.6 0.0 3 44 344 385 342 386 0.95 4 4 1.4e-18 2.4e-14 55.4 0.0 1 40 393 433 393 437 0.92
Sequence Information
- Coding Sequence
- ATGGGGATGGGCATGAGAAGGAGATCACTCGACACGGAACGGGGACATGGGGCCGCCGGCCTCCCACCACCGGGTGGGCCACCAGGCGCCGCTGGACCCGGCGGCGACTACGGCAAGGGGGCAGACCCCGGCCAAAATCAGCAGCACGGTACGGTGCCATCGAACGGTGCCCCTGGTTCCGCGGGGGGCGGTGAGAGCGGCACCGAGGGTGCCCAGGGGGATGTCAGCAAGGCCAGTGGAGAAGGTGGAGAGGGCGGGCAAGTTGGAGAGGGTGGAAGCACTGCATCtcagggaggaggggaaggtggtgAGATACCCCGTCATCCCGGAGAGAAACAGGAACCTGGTGTGGTGGTGAAGGAAGGCCACGAGATGGGCCAAGGGGAAAGAGCTCCAGGGTCCCAGGGACAGGGCCAGCAGGGAGGAAGAATGGAGGAGCTAGAGATCTATCCATGCTCCCCAGCAGATAGGATGCCAGGACCGAGGCCAGATGGCAGTGAGGTATCGGGAGCtccgggaggaggaggcggaggaggaactGGTGCCGGAGGCGGGGCGGGCAGTGGAATTGGAAcgggcgggggtggtgggggcggcggtgggggcgggggagggggtggaggaggcggagggggtggcggagggggaggtgggaagtGTGGCCCTGGGGGCCCTAAGAACTGGAATCACGAGGATATGGAGATGGCCCTTGACGCCCTGCGATCCCATGCCATGAGCCTCACCCGAGCCTCTGCCACATTTGGGATCCCGTCCACCACGCTTTGGCAGCGAGCACATCGCCTAGGCATTGATACACCCAAGAAGGATGGCGGTGGTCCCCCTGGGGGCAAGTCGTGGTCAGAGGATGACCTAACAACTGCCCTTGATGAACTGCGTGCAGGCCGCATTTCTGCTAATCGTGCTGCTAAGGTTTACCGTATACCAAGCAGCACACTGTATAAAATTGCAAGGAAAGAAGGAATCAAGCTCTCTGCTCCATTCAATGCGACTCCCACCACCTGGTCATCCGAGGACCTCAATAGGGCCCTTGAAGCGATCCGACAGGGCACATCTGTGCAGAGGGCATCATCAGAGCATGGCATTCCCAGTGGCACCCTGTATGGTAGGTGCAAGAGGGAAGGAATTGAGCTATCCAAGAGCAACCCAGTACCCTGGTCAGAGGATGACATGAATGAGGCACTTGAAGCTGTTCGTGTTGGTGAGATGAGCATCAACCAAGCTGCAATCCATTACAACCTGCCGTATTCTTCACTGTATGGCCGATTCAAGAGGATTCGATTTGAAGCGGAGGGCGGTGGTGTTGAAGGTGGCTCAGCACAAGGTCCTGCTGGTCCAGGAAGTGGAAGTAGCATCATGCTAACGACCAGCGGAGGAGGGCATGAGGGCATCGACTTTGAGATGTACAGCAGCTGA
- Protein Sequence
- MGMGMRRRSLDTERGHGAAGLPPPGGPPGAAGPGGDYGKGADPGQNQQHGTVPSNGAPGSAGGGESGTEGAQGDVSKASGEGGEGGQVGEGGSTASQGGGEGGEIPRHPGEKQEPGVVVKEGHEMGQGERAPGSQGQGQQGGRMEELEIYPCSPADRMPGPRPDGSEVSGAPGGGGGGGTGAGGGAGSGIGTGGGGGGGGGGGGGGGGGGGGGGGGGGKCGPGGPKNWNHEDMEMALDALRSHAMSLTRASATFGIPSTTLWQRAHRLGIDTPKKDGGGPPGGKSWSEDDLTTALDELRAGRISANRAAKVYRIPSSTLYKIARKEGIKLSAPFNATPTTWSSEDLNRALEAIRQGTSVQRASSEHGIPSGTLYGRCKREGIELSKSNPVPWSEDDMNEALEAVRVGEMSINQAAIHYNLPYSSLYGRFKRIRFEAEGGGVEGGSAQGPAGPGSGSSIMLTTSGGGHEGIDFEMYSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -