Basic Information

Insect: Hestina assimilis
Gene Symbol: -
Assembly: GCA_016906905.1
Location: JAFDUZ010000030.1:1718878-1719810[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0037 0.34 12.0 0.3 1 23 47 70 47 70 0.96

2 8 0.3 27 6.0 0.3 2 23 97 119 96 119 0.93

3 8 0.0029 0.26 12.3 2.8 1 23 141 163 141 163 0.97

4 8 1.4e-06 0.00012 22.8 0.9 1 23 167 189 167 189 0.98

5 8 1.5 1.4e+02 3.8 0.3 1 16 194 209 194 217 0.74

6 8 0.00067 0.061 14.3 0.3 1 21 223 243 223 246 0.89

7 8 0.0038 0.34 12.0 2.9 1 23 253 276 253 276 0.95

8 8 9.5e-05 0.0086 17.0 1.1 1 23 283 305 283 305 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0037	0.34	12.0	0.3	1	23	47	70	47	70	0.96
2	8	0.3	27	6.0	0.3	2	23	97	119	96	119	0.93
3	8	0.0029	0.26	12.3	2.8	1	23	141	163	141	163	0.97
4	8	1.4e-06	0.00012	22.8	0.9	1	23	167	189	167	189	0.98
5	8	1.5	1.4e+02	3.8	0.3	1	16	194	209	194	217	0.74
6	8	0.00067	0.061	14.3	0.3	1	21	223	243	223	246	0.89
7	8	0.0038	0.34	12.0	2.9	1	23	253	276	253	276	0.95
8	8	9.5e-05	0.0086	17.0	1.1	1	23	283	305	283	305	0.98

Sequence Information

Coding Sequence: ATGCGTCGTCGACGTCGGGCGAATAACGAATTGCCAGAGGAATCTGAAAAACGTATAGCTAAAACAATGATGCGTAGAAATGCAATGACGCTTCTTGAATGCTCAACGGCATGGGCCTTTCGTTGGTTCCAAAGCGCGTTTTATTGCTCTTATTGTGATGCAAAATTCATCGATCCTTTAATTTTGCGCGTACATGTCAGATCTTTCCATATAACCGAAAAGCCTACGAAACGAATATTTTCTAAACTAACTGAAAACAATATGGTTAAAGTTGACGTATCTGATGTATACTGCAGACTGTGTAATTATAAAATTGAAAGCATTGATTTTTTAAAGAAACATCTAATAAATATTCACGAAAAAACCTTACATCGGGATTTTAACGACGGTATACTGCCATTTAAACTAGATTCAAATAAATTTGATTGCCAAATATGCTATGCATCTTTCTCGAACTTTTGTAAAGTTAATGAACATATGAATACACACTACAAGAATTATATTTGCGATACGTGCGGCAAAGCCTTTGTTTCGAAATCACGTTTTAGAACACACATACAATCACATGAAGTAGGGAGTTTCCCATGTGGGGAGTGTGATGAAGTATTAGAAACTAGAGCGGCCAGAATGTGTCATAGATTGAAAATACACAAGAAAGGAGTTCGATACGCTTGTCCACATTGTCCAGAAGCCTTTACAACATATTATGCGAGGGCAAAACATTTGGTCGATAGCCACGATGAGCAGGAAAAGAAATATGAGTGCACTGCTTGTGGCAAATGCTTTGAGACGAGCTGTAAACGTGCAGCACACGTTCGAGCCACTCATAAGCCTCTAGAGAAACGTTATGACTGTTCCAACTGCCCTTCGTACTTTGTTAGCAGATCTAAACTGAAAAGGCATGTTTTAACACATGAGTTGATCAACTCATAA
Protein Sequence: MRRRRRANNELPEESEKRIAKTMMRRNAMTLLECSTAWAFRWFQSAFYCSYCDAKFIDPLILRVHVRSFHITEKPTKRIFSKLTENNMVKVDVSDVYCRLCNYKIESIDFLKKHLINIHEKTLHRDFNDGILPFKLDSNKFDCQICYASFSNFCKVNEHMNTHYKNYICDTCGKAFVSKSRFRTHIQSHEVGSFPCGECDEVLETRAARMCHRLKIHKKGVRYACPHCPEAFTTYYARAKHLVDSHDEQEKKYECTACGKCFETSCKRAAHVRATHKPLEKRYDCSNCPSYFVSRSKLKRHVLTHELINS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -