Basic Information

Insect: Hestina assimilis
Gene Symbol: -
Assembly: GCA_016906905.1
Location: JAFDUZ010000001.1:1562270-1574329[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00055 0.049 14.6 0.7 1 23 226 248 226 248 0.99

2 10 0.0009 0.081 13.9 1.7 1 23 255 277 255 277 0.99

3 10 6.6 6e+02 1.8 0.3 1 8 281 288 281 304 0.80

4 10 0.00031 0.028 15.4 0.5 1 23 311 333 311 333 0.98

5 10 2.6e-06 0.00024 21.9 1.7 3 23 341 361 339 361 0.96

6 10 6.9e-05 0.0062 17.4 1.5 1 23 367 390 367 390 0.97

7 10 1.8e-05 0.0016 19.3 0.7 1 21 395 415 395 420 0.95

8 10 0.00061 0.056 14.5 0.1 1 23 428 451 428 451 0.96

9 10 0.21 19 6.5 2.0 2 23 458 480 457 480 0.95

10 10 3.3e-05 0.003 18.4 3.0 2 23 491 512 490 512 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00055	0.049	14.6	0.7	1	23	226	248	226	248	0.99
2	10	0.0009	0.081	13.9	1.7	1	23	255	277	255	277	0.99
3	10	6.6	6e+02	1.8	0.3	1	8	281	288	281	304	0.80
4	10	0.00031	0.028	15.4	0.5	1	23	311	333	311	333	0.98
5	10	2.6e-06	0.00024	21.9	1.7	3	23	341	361	339	361	0.96
6	10	6.9e-05	0.0062	17.4	1.5	1	23	367	390	367	390	0.97
7	10	1.8e-05	0.0016	19.3	0.7	1	21	395	415	395	420	0.95
8	10	0.00061	0.056	14.5	0.1	1	23	428	451	428	451	0.96
9	10	0.21	19	6.5	2.0	2	23	458	480	457	480	0.95
10	10	3.3e-05	0.003	18.4	3.0	2	23	491	512	490	512	0.97

Sequence Information

Coding Sequence: ATGGCAATATGTCAGACTTGCTTAAGAACTGGCGAATGCGTTCAGCCTATGACCAGCCAAGACTCACAAGCCTACAGCTTGTTCATTGCAAAGGAAGACGATCCATTAATCATCTTGTACATATGCATCTACTGCAGGAGCTTCCTTCGAAAAATTATCAAGTTTATTGGACAATGTCAAACTTCAGACGTGTTCATACGGGAGATCTTAAACAATGATACTGAAGCAACACCCAAAATACAAACAAATTACTTGCAAATATCAGAACCAACATGTTACTATGTCGGACCTAACGTTATTTTGGAAGAGGTGGCTATAAAAACAGATAATGATAATGTACCATTGATTTTCCTGAATGAGAGCAACGGAAATGATTCTATTGATTATAATGATGGTATTCCGGACAATATAATTGTGGAGAATATAATGATGGAAAATATAATGGAAGAGAATATAATAGTAGACCTCCAAATGGAATGTATTGAAGATAATATACAGACAGACAGCCTACAAATACAAAAAACAACAAAGCCTAATAAGAAAAATGTCAAAAAGGGATTCTCATCGAGAATGGTCACGGAGACAAATGAATATACAGTTATTAAACTGAGTAACGAAGAGATAAAAGAAGAAATGATTAAATATTCGCAAAGTGATAAATACAAAATGCTGCCATATAAATGCGAGAAGTGTGTTAAAGGTTTCAATTTTGAAGATGTTCTAAGTAATCATATGGAGAAACATTCACCTAATCATGGACCGTTTCAATGCGAGCTCTGCGAACAGTTCTGCCCCAGCCGGGTGTCGCTGAGGGGGCACATGAAATCACATAGCACAAGATACAAATGCAAGTTGTGTAATATAATAAGGCTGTCGCGTCAACATATACTTGAGCACTACTCGTTGGATCACTCGGGTACGGCCGCGTTGTACAAGTGTCCCGAATGTCCATACACTTCCAATAAACGTACAGGAATGCAACGACACATCAGTCTGCATTCCAAAAAGGAACCTCTAGATTGTCATTTGTGCGGGAAATCGTATAGAACGAAGGAATCCCTGCGTGTTCATGTCATGCGTCACAACGATAAGAAGTTATATAAATGCGATTTATGCGAGAGCTCCTTCGTATACGCGTCCCAGTTGACGAAACACCTCCATTCTGTCCACGATCATAAAGACTATTATTGCGTTGAGTGCGATATTATATTTAAATCTACGGACAACTTGAAGAGGCACCTGAGGCAGGCCAGGAGACATCGAAGCTCCAGGTCATACAAATACCCGTGTAACCAGTGCGAGATGCGTTTCATATCCGAGGCGACCCTCGCAACCCACCAGACCTCGGTCCACGGTGCTGAAAAGCCGCTGATCTGCGACCAGTGCTCGCGCCGTTATACCTGCTCGGCAGCGTTGCACGGACACATACGTCGTGCCCACACGGAGCATCCCGAGGAGAAGGCGCGCCTGCCGTGCCCCCACTGCCACAAAACCTTCAGGCGTGGTTACATACTTCGCGCACACATGCGCTCACACGCTGGGACTCAAAGACCCGTCAACAAGAAGGTAATTTTCGTTGTTAATTAG
Protein Sequence: MAICQTCLRTGECVQPMTSQDSQAYSLFIAKEDDPLIILYICIYCRSFLRKIIKFIGQCQTSDVFIREILNNDTEATPKIQTNYLQISEPTCYYVGPNVILEEVAIKTDNDNVPLIFLNESNGNDSIDYNDGIPDNIIVENIMMENIMEENIIVDLQMECIEDNIQTDSLQIQKTTKPNKKNVKKGFSSRMVTETNEYTVIKLSNEEIKEEMIKYSQSDKYKMLPYKCEKCVKGFNFEDVLSNHMEKHSPNHGPFQCELCEQFCPSRVSLRGHMKSHSTRYKCKLCNIIRLSRQHILEHYSLDHSGTAALYKCPECPYTSNKRTGMQRHISLHSKKEPLDCHLCGKSYRTKESLRVHVMRHNDKKLYKCDLCESSFVYASQLTKHLHSVHDHKDYYCVECDIIFKSTDNLKRHLRQARRHRSSRSYKYPCNQCEMRFISEATLATHQTSVHGAEKPLICDQCSRRYTCSAALHGHIRRAHTEHPEEKARLPCPHCHKTFRRGYILRAHMRSHAGTQRPVNKKVIFVVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -