Basic Information

Insect: Hestina assimilis
Gene Symbol: -
Assembly: GCA_016906905.1
Location: JAFDUZ010000030.1:1660112-1665690[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.012 1.1 10.4 1.0 1 23 238 260 238 260 0.98

2 10 1.1 1e+02 4.2 0.1 3 23 285 306 283 306 0.94

3 10 0.00016 0.014 16.3 0.3 2 23 328 349 327 349 0.95

4 10 0.00081 0.073 14.1 0.3 2 23 354 375 353 375 0.97

5 10 0.00055 0.049 14.6 0.2 1 23 382 405 382 405 0.97

6 10 5.9 5.3e+02 1.9 0.1 3 23 413 434 411 434 0.82

7 10 5.2e-05 0.0047 17.8 1.7 1 23 440 463 440 463 0.97

8 10 0.00011 0.01 16.8 1.4 1 23 469 491 469 491 0.98

9 10 2.2e-06 0.0002 22.2 1.0 1 23 497 519 497 519 0.99

10 10 2.9e-07 2.6e-05 24.9 2.6 1 23 525 547 525 548 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.012	1.1	10.4	1.0	1	23	238	260	238	260	0.98
2	10	1.1	1e+02	4.2	0.1	3	23	285	306	283	306	0.94
3	10	0.00016	0.014	16.3	0.3	2	23	328	349	327	349	0.95
4	10	0.00081	0.073	14.1	0.3	2	23	354	375	353	375	0.97
5	10	0.00055	0.049	14.6	0.2	1	23	382	405	382	405	0.97
6	10	5.9	5.3e+02	1.9	0.1	3	23	413	434	411	434	0.82
7	10	5.2e-05	0.0047	17.8	1.7	1	23	440	463	440	463	0.97
8	10	0.00011	0.01	16.8	1.4	1	23	469	491	469	491	0.98
9	10	2.2e-06	0.0002	22.2	1.0	1	23	497	519	497	519	0.99
10	10	2.9e-07	2.6e-05	24.9	2.6	1	23	525	547	525	548	0.96

Sequence Information

Coding Sequence: ATGGAAGACGTAAATTTGATTAAGAAAAATAAAGGTCCTTTAATAGACCCAGCTCTCTGTCGTTGTTGTCGTTCAATAAAGAAATGCCGTGTTTTAACCAGTGAATACGAATTTATGGGATCGAAGGAAATTTATTCGGATATGTTGATGGATGTTTTTGGCCTACTTTTATCACATTTAGAAGAAGACAGTAAGGAGTCATGTATATGCGCGACGTGTGTCTCTCGCTTACGAGAAGCGTGTGCATTCAGGCGACAGGTTCTTCAATCGGAGCAAATGTTTTTAGATGCTCGACTACAAAATAAAAATGAAAATGATCAGAATGTCAAAATAGAAATAAAAACAGAACCAGAAACAGAGTGTTATCCCGACACTGACGCAATTGCTGATGAACCTGGGGATGAAAATTGTGTTTCAGATTCAGAGAAACAATCTACGTTGGATATTCAAACTGGTGTCAATTCAGAACGCAAGATGACTTTAAGAAAAAGCACTAGTACAAAGAAAAAAGCAACCAAGGAATTAAGAAGCGGTGATAAGATTCACAGGTTGAGGGTGAAATTGGATAAATTAATAAAACCAGATCCTCCACAGAAAAAAATGCAAACGAAAAAGCAGATAACAGCGGACCGCGACCAAATGGCTTTCACGAATACAAAAACGATAGTTCATTTTTCATACGTATGCCCATTTCACAATCGAATCAGCTTTTACTATTGTTACTATTGCAAAGATCAGTACACGAACCCGATCGAATTGAGAGAGCACACGATGTCCCACGATCCGAAACAGTTCGAGGAAACGACGGAAAATAAGAAAAATACACCGAAAATTGACATCACTAGAATCGATTGTCGACTGTGTCCGGAGAAAATTGATAATATCGATACTTTTAAGGATCACATCGAAAAAGTTCACGGAAAAATTATACATCCTGTTACGAATGAATTTTTGAAGTTTCGTTTGACATTAAATAATTTGACGTGCACTGAGTGCGATAGTGTATTCCCTTATTTCGATTCCCTCAAAAAACATATGATCGATCATTTCGGTACGCTGACTTGTGATATTTGCGGTGCTTGTTTCTTGGAACCGGCGTCATTACGTACGCATATAAAATCGCATAATAAAGTCGACGTGAATTTCCCATGCGAGATATGCGGAAAGAATTTAAAATCGAAATACAGTAGGGCCTTGCATATATCGACTATACACGAAAAAAAACCATTCGTTAATTGTTACAAATGCGATGCGGCATTTTTGTCGTACGCGTTACGTAATCGGCATTTAATCGAAGTTCACGGGGATAAACGTACATTCCCTTGTAAATTGTGCGATAAAGTTTATAATAGGCGTAAAACTTTAATGGAACATAATAGACGAAATCATTTAAAAGTATATAGGCATCAATGCGATCTTTGCGATCAAAGATTCTATCTCCCGTCGCGTTTGAAAGAACATATGGCGACTCATACTGGGGAAAGGAATTTTCGATGCGAGTTCTGCGACAAAAGTTATCCAAGATTACAATCATTACAGGAACACATACGGTCTCATACAAGCGAGAGAAGATTCAAGTGTGACATATGCAATACAGCGTTCACGCAAAGTGGTAGTCTAAAAAGTCACATGAAAAGTCACCATCAAGTTTACGAAATGGATGGTAATTTTAATTGA
Protein Sequence: MEDVNLIKKNKGPLIDPALCRCCRSIKKCRVLTSEYEFMGSKEIYSDMLMDVFGLLLSHLEEDSKESCICATCVSRLREACAFRRQVLQSEQMFLDARLQNKNENDQNVKIEIKTEPETECYPDTDAIADEPGDENCVSDSEKQSTLDIQTGVNSERKMTLRKSTSTKKKATKELRSGDKIHRLRVKLDKLIKPDPPQKKMQTKKQITADRDQMAFTNTKTIVHFSYVCPFHNRISFYYCYYCKDQYTNPIELREHTMSHDPKQFEETTENKKNTPKIDITRIDCRLCPEKIDNIDTFKDHIEKVHGKIIHPVTNEFLKFRLTLNNLTCTECDSVFPYFDSLKKHMIDHFGTLTCDICGACFLEPASLRTHIKSHNKVDVNFPCEICGKNLKSKYSRALHISTIHEKKPFVNCYKCDAAFLSYALRNRHLIEVHGDKRTFPCKLCDKVYNRRKTLMEHNRRNHLKVYRHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHTSERRFKCDICNTAFTQSGSLKSHMKSHHQVYEMDGNFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -