Basic Information

Insect: Hestina assimilis
Gene Symbol: -
Assembly: GCA_016906905.1
Location: JAFDUZ010000037.1:1260415-1262679[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.1 7.3e+02 1.5 0.9 2 17 57 72 56 73 0.84

2 15 9.3 8.4e+02 1.3 0.7 5 21 200 216 199 217 0.92

3 15 1.7e-05 0.0016 19.3 0.2 2 23 233 254 232 254 0.97

4 15 3.5e-07 3.2e-05 24.6 0.9 1 23 264 286 264 286 0.99

5 15 0.00013 0.012 16.6 0.9 2 23 311 332 310 332 0.96

6 15 0.00021 0.019 15.9 0.7 1 23 345 367 345 367 0.98

7 15 0.0069 0.63 11.1 2.9 1 23 375 398 375 398 0.95

8 15 4.2e-05 0.0038 18.1 3.2 1 23 404 426 404 426 0.96

9 15 1.8e-06 0.00016 22.4 2.7 1 23 432 454 432 454 0.98

10 15 1.2e-07 1.1e-05 26.1 0.8 1 23 460 482 460 482 0.96

11 15 2e-06 0.00019 22.2 0.8 1 23 488 510 488 510 0.99

12 15 8.6e-08 7.8e-06 26.6 0.9 1 23 516 538 516 538 0.98

13 15 0.00022 0.02 15.9 0.4 1 23 544 566 544 566 0.98

14 15 3.7e-05 0.0034 18.3 2.6 1 21 572 592 572 594 0.96

15 15 3.5e-06 0.00032 21.5 0.1 1 23 600 622 600 622 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.1	7.3e+02	1.5	0.9	2	17	57	72	56	73	0.84
2	15	9.3	8.4e+02	1.3	0.7	5	21	200	216	199	217	0.92
3	15	1.7e-05	0.0016	19.3	0.2	2	23	233	254	232	254	0.97
4	15	3.5e-07	3.2e-05	24.6	0.9	1	23	264	286	264	286	0.99
5	15	0.00013	0.012	16.6	0.9	2	23	311	332	310	332	0.96
6	15	0.00021	0.019	15.9	0.7	1	23	345	367	345	367	0.98
7	15	0.0069	0.63	11.1	2.9	1	23	375	398	375	398	0.95
8	15	4.2e-05	0.0038	18.1	3.2	1	23	404	426	404	426	0.96
9	15	1.8e-06	0.00016	22.4	2.7	1	23	432	454	432	454	0.98
10	15	1.2e-07	1.1e-05	26.1	0.8	1	23	460	482	460	482	0.96
11	15	2e-06	0.00019	22.2	0.8	1	23	488	510	488	510	0.99
12	15	8.6e-08	7.8e-06	26.6	0.9	1	23	516	538	516	538	0.98
13	15	0.00022	0.02	15.9	0.4	1	23	544	566	544	566	0.98
14	15	3.7e-05	0.0034	18.3	2.6	1	21	572	592	572	594	0.96
15	15	3.5e-06	0.00032	21.5	0.1	1	23	600	622	600	622	0.98

Sequence Information

Coding Sequence: ATGGATAGCACTGTAAGAAAGATTAATTTTTGTAGAACATGTTTAAGTGAGGCATCTAGTTTCAAATCATTATCAAGCAAAATGGAAGGTGACGATCGGACGCTTTGTGAAGTCCTCTGTTTCGTTATAAACATTGATATTTCTAATAACGAGGAATATCCTAAACAGGTTTGTAATGAATGTCACACAATGATATGTAAGGCTGATGAATTCAAAAAAAGGTGTATACAATCTGAGAATACATTAAAAAGTGGATTTTTGCCACGATCCTTTGATGAACTAATTAAACACGAAATAGGTAATAACACTGAGTTTATTGTCACAAAAACTCAATTACCGATAGAAAATGAAATTGTGGACGAGAATTCATTTACTGATTACCAAAAAAAGGACAATACTCAATCGTTAGACATTGAAATACCAGCAATGATGAATCTCGACAGTTTGAATTCTGATAATTATAGTGTGTACGAAAACTTTATCAAGGAAGAATCTGATGACTTTCTTCAAGATGATATAGGGGTTATGGAGAATATTGTAATTGAGAATAGAAAGGAAGATGGTGAAAAAATGAATTTATCCGATTCAAACATCTGTGAATGCGGTTTCTTATGTATACATAAACCAGAATTCAAAACACATATTAAAGAATGTAAGGTTTTACCTGAAAAATATAATAAACACAGTATAAAACTCACATGTCCTATATGTAATAAAGATTTCCATAATTTAGACTTATTAGAAGTACACATTCAAGTACATAAAGAAAACATAAACGGCGTAAGAGATTTTCAATGCCCTAAATGTGACGAGAGTTTTATATCTAAATCCCTATTTATATCTCATTTAAAGACCCACAAAAGCAAAATAAGGGTGAAACATAAGAAAATAATGAAAACGGAAAACAACACAGGTTTTTCTATACCTCTCAGTTGTGGGAAGTGTAACACACAGTTTCCCCACTTAGAAGCACTGACGTCACATATGAAAGTACACTTGGAAAAAATTGATAAATGCAATGAAATGAAAAACTATGAATGCTCTTTGTGCATGCGTAAGTTTGTACGTAAAACATCATTGATTGCACATATTAGCAGGCATGACGACAAGGCCCGAACCAAATACACATGCAAGGCTTGTAAACGTGAATTTCAGCACCAAGCCCACTTAGATAATCATATAACTCTAGTACATTCAAAGGATAAAGGATTTAGTTGTGAGCAATGCGGTAAAAGTTTCACGTCACAAGAGTGTCTTGATCATCATTTAGAAGGACATAAGGTAGATAAAAAACACCAGTGTAAAGTTTGCTCTAAAACATTTGCAATGCTGTCTACGTTGACTGAACATATGAGAACTCATACGGGGGAGAAACCTTTTCTCTGTTCGATTTGTGGTCGAGGTTTTAGTCAGAAGAATAATTTGGCTCAACACATGCGAAGGCACCAGGGCTTAAAGCCTTTTAAATGCGAAAATTGTGAACGAAGATTTGTATCAAAAGGCGAATTAGAAGCTCATACCCGAAAGCATAGTGGGGCACATCCGTTTGTCTGTGACGAGTGTGGCAACAGTTTCACCACATCCAGTTCATTGACGAAGCACAGAAGAATACACAGCGGAGAACGACCCTATGCCTGTGATCTGTGCTCTATGAAATTCGCTGTTCTGGGCACATTAAAGAATCACAGACGGACACACACAGGAGAGAAGCCTTACCAGTGCTCCCACTGTGAGAAGGCATTTATCCAGAGAACGGACCTGGTTGCCCATATTCGTTGCCACACTGGAGAAAGGCCATACATTTGCACAAGTTGTGGCCAAGCCTTCCGGAAGGCATCGGCTTTAAAAGTTCACATTAAAATTCATGGCAAAGAACCTTTAATAATGTAA
Protein Sequence: MDSTVRKINFCRTCLSEASSFKSLSSKMEGDDRTLCEVLCFVINIDISNNEEYPKQVCNECHTMICKADEFKKRCIQSENTLKSGFLPRSFDELIKHEIGNNTEFIVTKTQLPIENEIVDENSFTDYQKKDNTQSLDIEIPAMMNLDSLNSDNYSVYENFIKEESDDFLQDDIGVMENIVIENRKEDGEKMNLSDSNICECGFLCIHKPEFKTHIKECKVLPEKYNKHSIKLTCPICNKDFHNLDLLEVHIQVHKENINGVRDFQCPKCDESFISKSLFISHLKTHKSKIRVKHKKIMKTENNTGFSIPLSCGKCNTQFPHLEALTSHMKVHLEKIDKCNEMKNYECSLCMRKFVRKTSLIAHISRHDDKARTKYTCKACKREFQHQAHLDNHITLVHSKDKGFSCEQCGKSFTSQECLDHHLEGHKVDKKHQCKVCSKTFAMLSTLTEHMRTHTGEKPFLCSICGRGFSQKNNLAQHMRRHQGLKPFKCENCERRFVSKGELEAHTRKHSGAHPFVCDECGNSFTTSSSLTKHRRIHSGERPYACDLCSMKFAVLGTLKNHRRTHTGEKPYQCSHCEKAFIQRTDLVAHIRCHTGERPYICTSCGQAFRKASALKVHIKIHGKEPLIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -