Hass003699.1
Basic Information
- Insect
- Hestina assimilis
- Gene Symbol
- -
- Assembly
- GCA_016906905.1
- Location
- JAFDUZ010000030.1:1816191-1825031[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 44 0.0044 0.4 11.8 1.8 2 23 44 65 43 65 0.95 2 44 1.5 1.3e+02 3.8 0.1 2 23 93 115 92 115 0.95 3 44 0.0014 0.12 13.4 0.2 2 23 136 158 135 158 0.94 4 44 0.00028 0.025 15.5 3.3 1 23 163 186 163 186 0.97 5 44 0.071 6.4 8.0 2.4 1 23 190 213 190 213 0.96 6 44 0.028 2.5 9.2 1.5 2 23 216 238 216 238 0.96 7 44 0.00093 0.084 13.9 3.2 1 23 315 338 315 338 0.93 8 44 0.013 1.2 10.3 0.1 2 22 366 386 365 388 0.89 9 44 0.00057 0.051 14.6 0.1 1 23 410 433 410 433 0.92 10 44 0.0021 0.19 12.8 1.9 1 23 480 502 480 502 0.95 11 44 1.9 1.8e+02 3.4 0.4 2 23 530 552 529 552 0.94 12 44 0.11 9.9 7.4 0.6 2 23 573 595 572 595 0.94 13 44 0.0029 0.27 12.3 1.0 2 23 601 623 600 623 0.95 14 44 2.7 2.5e+02 3.0 3.3 2 23 653 675 652 675 0.89 15 44 1.6 1.5e+02 3.7 0.4 2 20 681 699 680 701 0.92 16 44 0.0016 0.14 13.1 2.6 1 23 749 772 749 772 0.96 17 44 0.62 56 5.0 0.8 1 23 844 867 844 867 0.94 18 44 5.7e-05 0.0051 17.7 1.7 3 23 874 894 873 895 0.94 19 44 1.9e-05 0.0017 19.2 2.3 1 23 900 923 900 923 0.95 20 44 0.014 1.2 10.2 1.4 2 23 929 951 928 951 0.93 21 44 3.3 3e+02 2.7 3.9 1 20 955 974 955 976 0.93 22 44 2.7 2.4e+02 3.0 3.4 1 23 1009 1031 1009 1031 0.96 23 44 0.023 2.1 9.5 2.6 2 23 1102 1124 1101 1124 0.91 24 44 4e-05 0.0036 18.2 2.5 1 23 1129 1152 1129 1152 0.96 25 44 0.02 1.8 9.7 0.6 1 23 1157 1180 1157 1180 0.95 26 44 0.012 1.1 10.4 2.5 2 21 1183 1202 1183 1205 0.95 27 44 0.02 1.8 9.7 3.6 2 22 1213 1233 1213 1233 0.96 28 44 0.057 5.2 8.3 0.5 1 21 1284 1304 1284 1307 0.90 29 44 0.001 0.094 13.7 0.1 2 23 1380 1402 1379 1402 0.96 30 44 7.7e-06 0.0007 20.4 0.2 3 23 1409 1430 1408 1430 0.95 31 44 0.0097 0.88 10.7 1.0 2 23 1435 1457 1434 1457 0.95 32 44 0.00081 0.073 14.1 2.9 1 23 1462 1485 1462 1485 0.97 33 44 8.3e-05 0.0075 17.2 5.5 1 23 1489 1512 1489 1512 0.97 34 44 0.00059 0.054 14.5 0.3 2 23 1519 1540 1518 1540 0.96 35 44 0.54 49 5.2 0.2 1 10 1546 1555 1546 1560 0.86 36 44 0.036 3.3 8.9 0.1 2 23 1658 1680 1657 1680 0.94 37 44 0.0096 0.87 10.7 1.7 2 23 1703 1724 1703 1725 0.95 38 44 0.006 0.55 11.3 1.5 1 23 1730 1753 1730 1753 0.95 39 44 0.13 12 7.1 1.4 1 23 1758 1781 1758 1781 0.94 40 44 0.0089 0.81 10.8 1.0 2 23 1787 1809 1786 1809 0.91 41 44 0.00041 0.037 15.0 0.1 2 23 1817 1839 1816 1839 0.97 42 44 0.063 5.7 8.1 0.1 2 23 1846 1867 1845 1867 0.96 43 44 3.8e-06 0.00035 21.4 1.0 1 23 1873 1895 1873 1895 0.93 44 44 1.7e-05 0.0016 19.3 0.6 1 23 1901 1924 1901 1924 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAGTACCCTCAAAATGTTAATGAACCTGCAAAGAATCTAAGTCCCAATACACTAAGGCGGAGGAATCTTCTTACTCTATTTAACAACACATCGATTATTCCTTTCAAATGTCGTGGTAAATGTAGATGTTTCTATTGCGGCAAAGATTTACCTGATTATGAAGATTTAAGGAAACATACTAAAGCACATGGTCCTTGCTCAGAAAATGACCGAGCAATTCAATTGATTAAAACAGATGATGCAGAAGTTAAGATAGATATCTCTGATATATCATGCGAACTGTGCAACGCATCGTTTCTAAATTTGGATGACATAATATCACATTTGATAACAAAACATATGTTTCCTTATGATAGAGATGTCAAACTAATTATCATGACATACAGACTTGTTGATTTACAATGTCTTACATGTGATAAAAAATTTAATCAAGTAAGCGAATTGGTAATACATGTGAATAACGACCATCCTGTGCAGTGTTTTGATTGTCATGTGTGCCATCAGAAATTCATAAGGAAACCGTATTTAGATGCTCACATGAGAGTCAAGCACAATAATGTTTATAAATGCTTGAAGTGTCTTCAGACCTTTCCATCCCACTCTGTTCTTCAGGAACACAAAATTAAATCTCACATAGCTGTATGCAATATTTGTTTTATTAGATTTTCATCCGAAAAAAAGAGATTAAAGCATATGAAATCTGAACATATAGGCGAAGCATTAAAATGTGGATTCTGTAATAAAATTATGAGTACAAACTTAGGTTTTCTCCGACACGCTGCTAAATGTGTTGTAAAAGACATTCATGGAAATGAATCTTTTTCTGTTGATGACGATGACGAAGAAAAGAAACCAGTTGTAAAACAAATAAGAAACAATATAGCTTGCATATTAAATATGTCAACGGCCATACCATTTAAATATTTCATGAGCAGATTTAGGTGTTTCTATTGTCCAAAACATTTTAATGACTGCGAAGAACTAAGAGCTCATACTGTTGTAGAACATCCAGTTTGTGATGTTAATTTAAAATGTATGAGATTACGTAATAGGCAAGAAGGTTGTGTCAAACTTGATACGTCCATTCTTTCCTGTAAAATGTGTTTTGAAACTTTTCCTAATTTAGATTCTTTAATAGAACATTTGGTAGCTGAGCATAAAGCTCTATATGATAAAACAGTAGATAGCAATATACAACCGTACAAACTAGTCAAGAATAATTATGCCTGTCCAATATGTAGTGAAGTATATACATATTTTAGCACGTTGTTGAAACATATGGGACAAGTTCACACTGATAACAAAAATATATGCATGCATTGTGATATAGTCAGCCCAGCCAAGAGAAATAGTGCCAATAAGTTAAGAAGGTTAAATCTTCAAATATTATTCAATAATACCTCTATTATACCTTTTAAATGGCGCGGTAAATACTTATGTTTTTACTGTGGAAAGGATTTTAAAGTTTATGAAAAATTGAAGGAACATACTAAAAATCATGGTGTATGTACTGATAAAGATCGAGCTTTGAGATTAGTTAAATCTGCCGATGTTGAAGTTAAAATAGATGTATCAAGAATTACGTGCAACTTATGTGATGATGAGTTCAAACAATTGAAAGAAACTGTTACTCATTTAGTTACTAAACATAATTTGTCCTACGATTGGGACGTCAAATTATCTATAGTTCCATATCGATTATCTGATTTAAAGTGCCTTCTGTGCGATCAGAAATTTAATTACTTCAGCAAAATGATTATACATGTAAACAATGATCATCCAAGCCAGAATTTAATATGCGTTAAATGCCAACAAAAGTTTAATAAAAAGAGGGATTTAGATGCTCATATACGTTCTAAACATAAGAAAAATCTGAACTGTACAAAATGTGTCAATAGCCTTTCTACGAATTCAGAAATTTTTTGCCACAAGAAGCGCACACATGCATCCAGATGCAACATTTGTTTTAAAGACTTCTCATCGTTTAGAGACTGCTTTAGTCACATAAGTAACGGGCACGAAGAAGCTATTCTTAAATGTGGATTCTGTTCTAACGTTTTGACAACGAAACAGAGTTTTCTTAGACATGTAATAAAATGTCCGAATAAATTTAGCGGTTCCTTAGATAATAAAGAAGTAGAAGAGGTTAAAAAACTTTCTGTTACACAAATTAGAGACAACTTAGCTTGTATTTTTAACACGTCAACGGCTATACCATTTAAGTATTTTATGAGTCGATTTAGATGTTTCTATTGCCCTAAAGATTTCAGTGAGTGCGAGGATCTTAAACAGCATACTGTAACTGAGCATCCTCTTTGTGATACTAAATTAAAATCAATGAAGTTGCGCCATAGACACGACGGAGTCATTAAAATCGATACCTCTTCCTTGTCTTGCAAAGTTTGCTTCGAAAACATGCCAGACCTAAATACTTTACTTTACCATTTACAATACGAGCATAAAATATATTGCGATAAATCTGTATCAGCTAGTTTAGAGTGCTATAAACTTTTAAAAGATAATTTCCCTTGTCCCTTTTGCGGTGAAGTACATAGATATTTTCGGTCTTTATTAAATCATGTAGCTAAATCGCATTCGGAGAATAAAAACATCTGCGTACATTGTGGTATGTCGTTTAGAAATGCGCCGAATTTACGAACGCACATTGCACGTCACCACAAGACTGCTAATTATAAATGTTCAAAATGTGATTTACGTTTCTCAACCAATAGCTATTTGAAAACCCACTTGGGTCGTATGCACGGTACGAAAGTCGTAGAATGCAAACAATGTCATGTGAAGTTTACATCAGTATATGAGATGCAAAGGCATAGAATACAAGTGCACAATATCGGTCACGAATGCTCTTTTTGCCATAAGTTGTTTGTGGGAAAATCCTGCGTAGTTAATCATATACATGAAGGGCCGTACGACCGCTGTACATCTGAGCGGAGAAGGAAAAACTTACAAATACTGTTCAACAACACTTCCATAATACCTTTCAAATGGAGGGGCAAATATCGGTGTTTTTATTGCGGTCAGAGTGAAACGGAATATCTGACCTTTAAAAAACATACGAAGTCACACGGTTTATGCAACACTAGCGATAATGCACTAAAAACAATTAAAGGGAATCATGTAGAAATCAAAATTGATGTATCCGAAATTCTGTGTGAAATTTGCTATGAACCTTTAACTAGTTTTCACGAAATTATAGATCACTTAATAGGTAAACATGAAATGGAATATGATAAAAATATCTATACGCCTTTTCAGGAATACAGATTGTCGGATTGTCGATGTCAATTATGTGGCCAAGAATTTAGTTATTTTGGACATCTTATTAGTCATTCAAATCTTGCTCATCCTCAAAATAGTTTTATATGCGACCATTGTGGTGAAAAGTTCAATAAGAAAAGAGATTTGGCGATGCATATGAGGTATTATCATAAAGAAGGTGGTTATCCTTGCGATGAGTGTAAAGAAAACTTTGAATCGTATCCAGTATTACAAAAACATAAAAACAATTTCCATTTTAGGAAATGCCAGATCTGTGATTTACGTTTTCCTTCATATACGCTTTTGCAAAAGCATTTGAAATGCGACCATTCGGATGATAGTAGTTATGAAAAATGTCCACATTGCTCAAAAGAGTGTCAAACATCGCAAGGTCTAAAGCAGCATATCAGAAAATGTCAACGAAAAATTGAAATGAAACCACCGGCTTTTCTAGAAAGCAACTTGTTACAACCACATAAGAAACAGAACGTGCTACAAATAAGACGAAATATTCAATGCGTTTTAAACATGTCTACAGCGATACCTTTTAAATTCTTCGCCAAATTCTCTTGTTTCTATTGTTCTAAATATTTCATTGAATTCGACGACCTCAAAGAACATGTTGTTGCTGAACACCCAATGTGTGACTTGAAAGAAAAATGCATGAAGAATTTTAAAGGAGAAAGGATAACTGTTAAAATCGATATATCCACTTTAGCTTGTAGAATATGCTATCAACCAATAGGAGACGTAGATTCTCTTATTGACCATCTAATATCGAAACACTCTGCCGATTACGATAAAACAACGACGGGTTGCTTTGAACCATTCAGGATAATAAAAGACAACATTCCTTGTCCAATTTGCCCAAACATGTTTAGGTATTTTGGTACACTTTTAAGACATATAAACTCCGAACACAGTAACAACAACAAAATTTGTGATTTCTGTGGTCGAACTTTTAAAAACGCTGCAAATTTGAAAGTGCATATAAATTACGCACATGCAGGATCTTCAGAGTGTGAAATTTGCGGTGTTAAATATAAAAATCAGTGGTGTTTGGGGCGTCATAGGGCAAAATCACACAACGCCAAAGATTTTCAATGCCCCAAATGTCCGGAACGTTTTCAATCTCAATACCATAAACAGAAGCACCTAATAAAAGTCCATGATATCGGCCACAAGTGCACGTACTGTGAAAAAATGTTTACAAGAAATTCATTTATGAAGGATCATATACGTAGAACACACTTAAAAGAGAAAAACGTACCCTGTACCGTGTGCAACGAGAAGTTTTTTGATAATTATTTGTTGAAACTGCATATGGTGAAACATAAAGGAGAGAGGAACTTTAGCTGTGAGGTTTGCGGCAAAGCGTTTCTTAGACGGAGTACCAAATTGTGTACAGTGGAGGACAAATATAAGAAAACTGAAACGGTGCGTAAACTTTTATTAAAAAGACGGAATGTCGAATACGTTTTGCAATATAGCAACGTCACTCCCTTCATGTGGTATAAAGGAAAGTATAGATGCTTTTATTGCGCTGAACCCATGAAGGATCCTGTAATTCTAAGAGAGCATACGGCTAGAGTTCACCAGTTTGCTAACTTAGAACTTGTCGTATATGACAGGACGAAAAATAACAGGAATCGTGATGCTGCAGTTAAAATTGATGTGACGGATATATCGTGCAAGCTATGTCCACAAGCTGTGAACAGTTTAGAACAGTTGATTCATCACTTAATCATAGCTCATGATGCTGAATATGATGTCAGTGTACCTAATTGCCTTCTACCTTTCAAACTCGATAAAGACCAACCAACATGTCCAATTTGTAATATGAAATTTCGTATTTTTGAATATCTCCTCCGTCATGCAAATAAACATCATTTAGCTCATGATTATATTTGTGACGTTTGTGGGACAAGTTTTCAAGGTGAAAATCATTTAAAAATGCACAATAGGTACTATCACAGAGATGGAGGCTACACGTGCGATCATTGTGGTATAAACTTGTCGACTTTGTCCAAGAAAACTCTACACGAAAAGAATGTACATATGGTAAATTTATCAACATGTCCACATTGTCCGGAAACATTCAAAAGTCCGTATTTCAAGAAACTGCATTTAGCAAACGTGCATGGGGTCGAGGAATTGAAAATCAAATGCCCATATTGTCCAAAAGTATACCCACAAGAGAGCATAATGTCTCGTCACATGAGACGAGTTCACCTTCGAGAGAAGAACGTCGAATGTCAAATATGTGGAGATAAATTCTTCGGTCCCTATGATGTGAAGTTGCACATGTTGAAACATAATGGGGATAAGAAGTTCGTTTGCTCGGTTTGCGGAAAGAAATTTTCAAAGAAAAGTAATTTGAATACACATTCTGTCATTCACTCGGGCCAAAAGAAATACATTTGTTCAGTTTGTGGTAAAGATTTTGCACACCGTCCTAATCTCAAAATACATATCAGTTCTCGTCATCCAGAGTATATAATTGAGCGTGAACTCATTATTGATGATGATGATGTAGAAGAAAGCGAATTCGTCCAGATAGAATTAGAAAAAGAATTAAATATTGTTGAAGAGACTGTATAA
- Protein Sequence
- MLKYPQNVNEPAKNLSPNTLRRRNLLTLFNNTSIIPFKCRGKCRCFYCGKDLPDYEDLRKHTKAHGPCSENDRAIQLIKTDDAEVKIDISDISCELCNASFLNLDDIISHLITKHMFPYDRDVKLIIMTYRLVDLQCLTCDKKFNQVSELVIHVNNDHPVQCFDCHVCHQKFIRKPYLDAHMRVKHNNVYKCLKCLQTFPSHSVLQEHKIKSHIAVCNICFIRFSSEKKRLKHMKSEHIGEALKCGFCNKIMSTNLGFLRHAAKCVVKDIHGNESFSVDDDDEEKKPVVKQIRNNIACILNMSTAIPFKYFMSRFRCFYCPKHFNDCEELRAHTVVEHPVCDVNLKCMRLRNRQEGCVKLDTSILSCKMCFETFPNLDSLIEHLVAEHKALYDKTVDSNIQPYKLVKNNYACPICSEVYTYFSTLLKHMGQVHTDNKNICMHCDIVSPAKRNSANKLRRLNLQILFNNTSIIPFKWRGKYLCFYCGKDFKVYEKLKEHTKNHGVCTDKDRALRLVKSADVEVKIDVSRITCNLCDDEFKQLKETVTHLVTKHNLSYDWDVKLSIVPYRLSDLKCLLCDQKFNYFSKMIIHVNNDHPSQNLICVKCQQKFNKKRDLDAHIRSKHKKNLNCTKCVNSLSTNSEIFCHKKRTHASRCNICFKDFSSFRDCFSHISNGHEEAILKCGFCSNVLTTKQSFLRHVIKCPNKFSGSLDNKEVEEVKKLSVTQIRDNLACIFNTSTAIPFKYFMSRFRCFYCPKDFSECEDLKQHTVTEHPLCDTKLKSMKLRHRHDGVIKIDTSSLSCKVCFENMPDLNTLLYHLQYEHKIYCDKSVSASLECYKLLKDNFPCPFCGEVHRYFRSLLNHVAKSHSENKNICVHCGMSFRNAPNLRTHIARHHKTANYKCSKCDLRFSTNSYLKTHLGRMHGTKVVECKQCHVKFTSVYEMQRHRIQVHNIGHECSFCHKLFVGKSCVVNHIHEGPYDRCTSERRRKNLQILFNNTSIIPFKWRGKYRCFYCGQSETEYLTFKKHTKSHGLCNTSDNALKTIKGNHVEIKIDVSEILCEICYEPLTSFHEIIDHLIGKHEMEYDKNIYTPFQEYRLSDCRCQLCGQEFSYFGHLISHSNLAHPQNSFICDHCGEKFNKKRDLAMHMRYYHKEGGYPCDECKENFESYPVLQKHKNNFHFRKCQICDLRFPSYTLLQKHLKCDHSDDSSYEKCPHCSKECQTSQGLKQHIRKCQRKIEMKPPAFLESNLLQPHKKQNVLQIRRNIQCVLNMSTAIPFKFFAKFSCFYCSKYFIEFDDLKEHVVAEHPMCDLKEKCMKNFKGERITVKIDISTLACRICYQPIGDVDSLIDHLISKHSADYDKTTTGCFEPFRIIKDNIPCPICPNMFRYFGTLLRHINSEHSNNNKICDFCGRTFKNAANLKVHINYAHAGSSECEICGVKYKNQWCLGRHRAKSHNAKDFQCPKCPERFQSQYHKQKHLIKVHDIGHKCTYCEKMFTRNSFMKDHIRRTHLKEKNVPCTVCNEKFFDNYLLKLHMVKHKGERNFSCEVCGKAFLRRSTKLCTVEDKYKKTETVRKLLLKRRNVEYVLQYSNVTPFMWYKGKYRCFYCAEPMKDPVILREHTARVHQFANLELVVYDRTKNNRNRDAAVKIDVTDISCKLCPQAVNSLEQLIHHLIIAHDAEYDVSVPNCLLPFKLDKDQPTCPICNMKFRIFEYLLRHANKHHLAHDYICDVCGTSFQGENHLKMHNRYYHRDGGYTCDHCGINLSTLSKKTLHEKNVHMVNLSTCPHCPETFKSPYFKKLHLANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECQICGDKFFGPYDVKLHMLKHNGDKKFVCSVCGKKFSKKSNLNTHSVIHSGQKKYICSVCGKDFAHRPNLKIHISSRHPEYIIERELIIDDDDVEESEFVQIELEKELNIVEETV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -