Hass001440.1
Basic Information
- Insect
- Hestina assimilis
- Gene Symbol
- -
- Assembly
- GCA_016906905.1
- Location
- JAFDUZ010000001.1:8167796-8168602[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-08 7.2e-05 22.9 0.0 2 38 11 48 10 52 0.90 2 2 2.6 3.7e+03 -1.7 0.1 1 10 157 166 157 167 0.85
Sequence Information
- Coding Sequence
- ATGAAGATGTCAAAAAAGCGCCAATATTCAAAAGAAGCTATAGATAAAGCTCTCAGTTATGTGCAAAACTATGAAGGATCCATTCGCAGCGCAGCTAAAAAGTTTGTTGTACCTAGGAGTTCAATTCAGTTTAAATTAAAAAACCCTGAAACAAAATTTAAATCCGGGCCCAATCCTGTATTAACAGATATTGAAGAGTCTGCTTTAGTCATTTTAATTGTAACTTTGGCTAAAAGAGGCTTTCTAAGAAAAAAAGATGATATAAAGACATGTGTTCAAGATTACCTCAGAGAGAATCCCCGACCGAACCCTTTTCGAAACAACCGTCCTGGAGATATATGGTTCAAAGCATTTTTAAAACGTCATCCGGAAATTTCTGTTCGGACGTCAGAAGGTGTCACAAATGCAAGTGCATGTGTGTCGGAAGAAAATCTGCGGAATTGGTTTCGAGAAATCCAAAGCTACTTAGACGAAGAACACCTAAACGAAGCTATCAGGGAACCGACGCGTGTTTTTAATGGCGATGAAACAGGCTTTTGCATTTGCCCAAAAACAGGAAATGTTTTAGCTCCAAAAGGAACCAAAAACGTTTATGCAATTGAGAAGGCTTCTCCTAAAGAAAACATAACGGTTATGTTTTCTTTTTCTGCTGCAGGTTTTATGATAATATACCCATATAAATCTCGCTTTCCATATCGCATTGCTCAAAGCATAGCAGATGGTTGGGGCATTGGGCGAAGTGACAATGGTTGGATGACTGCAGCAGTTTTTTATGAAGATATTGCCAAGTGGTTGCTAGTAGTTTAG
- Protein Sequence
- MKMSKKRQYSKEAIDKALSYVQNYEGSIRSAAKKFVVPRSSIQFKLKNPETKFKSGPNPVLTDIEESALVILIVTLAKRGFLRKKDDIKTCVQDYLRENPRPNPFRNNRPGDIWFKAFLKRHPEISVRTSEGVTNASACVSEENLRNWFREIQSYLDEEHLNEAIREPTRVFNGDETGFCICPKTGNVLAPKGTKNVYAIEKASPKENITVMFSFSAAGFMIIYPYKSRFPYRIAQSIADGWGIGRSDNGWMTAAVFYEDIAKWLLVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -