Hass003655.1
Basic Information
- Insect
- Hestina assimilis
- Gene Symbol
- -
- Assembly
- GCA_016906905.1
- Location
- JAFDUZ010000030.1:1632367-1636562[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-10 3.3e-07 30.4 0.0 1 35 155 189 155 193 0.94
Sequence Information
- Coding Sequence
- ATGAGTAGACTAAAAGCTGAATTTATAGACCGTTGTAAGTGTTGTTTGGAGGAAATCAGCTTGAAAAATATGTGGACAGAGTATTATAGTGATGGTGAACGAGAAATATACGGAGAAATGTTAATCGATTGTTTTGCATTAGCCTGGGAACAGCCATCGGGAGACACAGGCATGGAGCTTATCTGCGAATCCTGTGTAGCTCGTCTCAGAGATGCATATAGATTTAAAAAGGAGATATTGCATTCTGAACAGGTGCTGTCTGAACAACTCAAAAATGTTTCAGAAACAAGCGATCAAATCAAACAGGAAGATGACTCAGAAGCAGAAATAGAGACTGAGTATTTAAGTTTAGAATATTTGGATGATGATAATGAGGATGATAAGACAGATATAAAAACGGAATCAGGATTCTCAAGATCCATCCGAGACGAATTGATTATAAATAGGAAACTCAAGAGATATACAGAGGAAGACTTGGAGAAATGCATCAAAGCCGTCCGCACTAAAACATTATCTCAAAACAAGGCCTCTCTGCTTTACAATGTACCGAGGACGACAATTAGTGCAGCTTTGGCGAATGCCCAGCTACTAAGGGATTGTATAAAATCGCAGAAGAGGAAACGGCCGGAGCTCCAAAAACCTCAGGAAAATGTCGACTTAATCATGAAATACACAAACGCTACCCCTTTTAAAGGCTACCTGCGTACTGGTTATGCCTGTTATTTCTGTTTACGAGAATATGATAAAGCGATTGAGCTTAAATATCACACTATCACTGAACACGGTGGCGATAATATGCTAAGAGTCAATATTGTGTCAGATCGAAGTGTCAAGATGGACCTGACTGACTTGTTTTGCGCGAAAGTTTTCACGACTCGGATCCGTTGTCTCGATCACACGAGATCAGTTCACATGTCGAACAGCAAACGACACAAATCCGGTTACTGCGGCGAAAAGTTTATGGATATTATTAAGAAAAATGATCACGAGGAGAAAGTACACAGCGCTGCCAAGCCGATATACAAATGCCAAGCTTGTAATAAAATTTACAAACACCAAAATTCATTACGTAGTCACGTAAAGAGCTTCCATCTTATGTTTAAACCGTTTAAATGCTCCATATGTGATGTTGGGTTTTACAGGAAGAGAGATTTGAAAATGCATACGATCACGCATACAGGGGAGAAAGACTACCAATGCGATGTATGTTCGAAGACATATGGGAGGAAGTATACTCTACGTGAGCATATGCGTATCCATGCTAACGATAGGCGGTTCAAATGCATGCAATGCGGACATGCGTTCGTGCAGAAGGGCAGTTGGCGGAGTCACATGCGAACGAAGCATGGTGAACTAGTATAG
- Protein Sequence
- MSRLKAEFIDRCKCCLEEISLKNMWTEYYSDGEREIYGEMLIDCFALAWEQPSGDTGMELICESCVARLRDAYRFKKEILHSEQVLSEQLKNVSETSDQIKQEDDSEAEIETEYLSLEYLDDDNEDDKTDIKTESGFSRSIRDELIINRKLKRYTEEDLEKCIKAVRTKTLSQNKASLLYNVPRTTISAALANAQLLRDCIKSQKRKRPELQKPQENVDLIMKYTNATPFKGYLRTGYACYFCLREYDKAIELKYHTITEHGGDNMLRVNIVSDRSVKMDLTDLFCAKVFTTRIRCLDHTRSVHMSNSKRHKSGYCGEKFMDIIKKNDHEEKVHSAAKPIYKCQACNKIYKHQNSLRSHVKSFHLMFKPFKCSICDVGFYRKRDLKMHTITHTGEKDYQCDVCSKTYGRKYTLREHMRIHANDRRFKCMQCGHAFVQKGSWRSHMRTKHGELV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796886;
- 90% Identity
- iTF_00796886;
- 80% Identity
- iTF_00796886;