Hass001740.1
Basic Information
- Insect
- Hestina assimilis
- Gene Symbol
- lolal
- Assembly
- GCA_016906905.1
- Location
- JAFDUZ010000001.1:13630456-13634416[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-16 3.1e-13 49.7 0.0 3 42 322 362 320 365 0.94
Sequence Information
- Coding Sequence
- ATGTCGCAGCAATACAGTCTGCGGTGGAACAACCACCAACCAAATTTTATTTCTATGTTTGGTACTTTACTTGCAAATAAAAATTTGGTTGATGTTACTCTTGCTGCTGAAGGGCAACAATTAGTTGCACACAAAGTTGTACTGTCAGCATGCAGCACATATTTTCATTCGCTGTTTATTGACAATCCTTCACATCACCCCATAGTTATTTTGAAGGATGTCACATTTAACAACTTATGTACTATGGTGGATTTCATGTACTATGGAGAAGTTAATGTTACTGAAGAACAGTTGCCACAGGTTTTAGAGACAGCTAAAATTTTAAAAATCAAAGGACTCACAGAAATGCCGGACTCAACCTCATTAACAAGATCTCAAGGAGCATCAACCGACTTTCCAAATACCGAAAATTCTAACGAGACAAACAGGCCATTGGTGTCCCCATCATCACCAAATATAAAGCGAAAACGACGTCGAATGAGCTCAACAGGATCAGTTGTTAATTTGGTGTCAGAGGACAACAGGAGCAATGATTGTGGGCAATCCATGGAAATGATGAGGGAGGCTGTTACGTTCAGTAGTGTACCACAGCAGAAGCGGGAACTTGATGAAAGAATGGATGCTCAGACTGGGGAGCCATCAAACATGAACATCAATCAACTCGGTATTGATACAAATGCAGTTGGAATGCCACAAGGACAATGGAATATGTTGGAGCATCCATACCCTCGGTATTCAAACGCTCACCTTGGCGGCGGCGGGTTTCAAACTGATCAGGGGATGTATCTTAATAATGTGATAAATCCTCATGGAGATCCCGACATGAATCACTACGGCCAGTCACTAGGAGTACCCGGCCCAGCGCCCGGACAAAACTTTGTCGCTGAAACAGCACCGAACCAGATGCAACAGATAAATACGGTGCCGCAAAGACGACGTCGCCAGACCAACCCTCAAGATGCAGAAAATTTTCAGAAAGCCTTGGAAGCAGTACGCATCGGTGGTATCGGCTTCTGCAAGGCGGCGCGACTATATGGAGTTAACAACCGAACGCTATGGCTCGAATATAAAAAGAAAGGCTACCCGAACAATCGGCCGAGTATCAAGAGCCGAATCAAGCGCGAACACGTAACCCCGCCCCCGGAGCACAAGGAGGAGCCGCAGCAGCAGGAGCAGCAGATGGCGCTGATATGTCCGCCGCAGCCGGTGCCGGTGGGCTTCATGGACCCCCGGCCGGTTGAGTTCCCGCTGCAAGTGAACAACGCGCCCCTGAACATCATCAACGGCGTCAACTTCCCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFGTLLANKNLVDVTLAAEGQQLVAHKVVLSACSTYFHSLFIDNPSHHPIVILKDVTFNNLCTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGASTDFPNTENSNETNRPLVSPSSPNIKRKRRRMSSTGSVVNLVSEDNRSNDCGQSMEMMREAVTFSSVPQQKRELDERMDAQTGEPSNMNINQLGIDTNAVGMPQGQWNMLEHPYPRYSNAHLGGGGFQTDQGMYLNNVINPHGDPDMNHYGQSLGVPGPAPGQNFVAETAPNQMQQINTVPQRRRRQTNPQDAENFQKALEAVRIGGIGFCKAARLYGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPEHKEEPQQQEQQMALICPPQPVPVGFMDPRPVEFPLQVNNAPLNIINGVNFPMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796635;
- 90% Identity
- iTF_00796635;
- 80% Identity
- iTF_00796635;