Basic Information

Insect: Hesperia comma
Gene Symbol: -
Assembly: GCA_905404135.1
Location: FR990039.1:3412644-3428760[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.37 42 5.6 0.5 1 23 233 255 233 255 0.86

2 15 0.0074 0.86 10.9 2.4 1 21 311 331 311 332 0.93

3 15 0.84 97 4.5 2.7 1 23 348 371 348 371 0.96

4 15 0.023 2.6 9.4 0.2 3 21 410 428 408 429 0.92

5 15 0.0093 1.1 10.6 4.5 1 23 1023 1046 1023 1046 0.97

6 15 0.66 76 4.8 1.4 2 23 1095 1115 1094 1115 0.92

7 15 1.6 1.8e+02 3.6 1.0 2 23 1349 1370 1348 1370 0.93

8 15 6.6 7.6e+02 1.7 0.1 2 11 1386 1395 1385 1398 0.86

9 15 0.79 91 4.6 1.5 2 23 1417 1438 1416 1438 0.93

10 15 0.0024 0.28 12.5 1.4 2 23 1454 1475 1453 1475 0.96

11 15 2.9e-07 3.3e-05 24.8 4.7 1 23 1481 1503 1481 1503 0.99

12 15 0.00089 0.1 13.8 3.9 2 23 1509 1530 1508 1530 0.97

13 15 0.0065 0.75 11.1 0.5 2 23 1537 1559 1536 1559 0.95

14 15 1.2 1.3e+02 4.0 0.2 3 20 1568 1585 1567 1589 0.94

15 15 0.014 1.6 10.1 0.2 3 23 1598 1619 1597 1619 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.37	42	5.6	0.5	1	23	233	255	233	255	0.86
2	15	0.0074	0.86	10.9	2.4	1	21	311	331	311	332	0.93
3	15	0.84	97	4.5	2.7	1	23	348	371	348	371	0.96
4	15	0.023	2.6	9.4	0.2	3	21	410	428	408	429	0.92
5	15	0.0093	1.1	10.6	4.5	1	23	1023	1046	1023	1046	0.97
6	15	0.66	76	4.8	1.4	2	23	1095	1115	1094	1115	0.92
7	15	1.6	1.8e+02	3.6	1.0	2	23	1349	1370	1348	1370	0.93
8	15	6.6	7.6e+02	1.7	0.1	2	11	1386	1395	1385	1398	0.86
9	15	0.79	91	4.6	1.5	2	23	1417	1438	1416	1438	0.93
10	15	0.0024	0.28	12.5	1.4	2	23	1454	1475	1453	1475	0.96
11	15	2.9e-07	3.3e-05	24.8	4.7	1	23	1481	1503	1481	1503	0.99
12	15	0.00089	0.1	13.8	3.9	2	23	1509	1530	1508	1530	0.97
13	15	0.0065	0.75	11.1	0.5	2	23	1537	1559	1536	1559	0.95
14	15	1.2	1.3e+02	4.0	0.2	3	20	1568	1585	1567	1589	0.94
15	15	0.014	1.6	10.1	0.2	3	23	1598	1619	1597	1619	0.97

Sequence Information

Coding Sequence: ATGTTGGAAAATAGCAGAAAAAGGGCTAGAAAGTCCAAGTTGGAGGTCAGAGAAGGCGTAGAGTTAGAAGAAGCTACAGTTTTGTATATGGAGAAAATTGAAACAAAGATAAAAGATGAACCCATGATTGATGTTGGACCAACTAAACTCCTTGGTACAAGCAAACTATTTCGAGACCCATTTGAAGATGTAAATGACGCAGCCATGCCTACAATAGATCATAAACCTAAGATGGAGTTCTCTGTAAAAATAGAAGTGGAGGAATTTGACGAGGCAGAGATGAAAGAAATACAAGAGAGGAACAATCAAATTGAAGCGAATAATGTGACTATACCTGAAAATAATTATTCAAAAGGTTCAAATTGTGCTGCAACAAGTGGTGTACAAGAAATTAAATCTACTATTAGTAAAGCAAAAAATGATAAAGAAATCGGAACAGGGACGAAACAAACTGTTTCTAGTAAAGAATTTAAGGAATATATTACAAATAGACTAATGATTTTGAAAGTTACGGAACGATTGGTTAAATCAGATCAAGCTGTGGATAGAATTATAGCGATAGGAGTCAGAAATTATGTTGGGAGGATACTTGAAGAACCATACAAAGAACCGAGAGACGTGCTGTTATGCAAGGCTCTGGAAGACTGGCAAGTGTGGCATCTAGAAAATTCGGCCGTCCGAGACATCCCATTGATCTACAAATGCTATATTTGTGGGAAAACATGGTGGTATCTTTATGATTTCAGAGAGCATATACTTTTGCATACGAAACTGAAGAATTTTGAAGTCTCACTGGAATCAAACAATGATGAATGCTGTTTGATTTGCTTCCAGTTGGATATAATATACAATGATGTGGAACTGCCAGAGACAAGCTGTGACAGATGCGAGAAGGCAGCAGAAAGTCATGAGTTTATTGATAACGAGCCATACATGTGTTTGGGGTGTAAAACGACATTCTCTACGTGTACCCAACTAAAATTGCACGAAAACAAATGTCCTCAGTTCAAAAATCAATTCTTTCCCAACGCTACTGAAGTACACAAATGCAGTATTTGTATTTATGAATGTCCCACAGAAAAAAGTCTTAGTGACCATATGATTCGGAGACATGCGGTTCGATCCGATGCAGTAACTACTTGGGATGTGAAAAAATGTAGTGTATGCTCACGATCATACATATTAATGGCTTTGCATATATGTGTAAGGAAAACGAATAACTATGGCTGCAATTATTGTGGAAGAAGTTTCCAGAAGAAGGTGTACAAAGAGATTCACATGGCTAGCTGTGAGAAGGAGACAGAATGCAGGTTGTGTGACAAGCCTTTGTTGGCGAGATGCATGGAACATAGTCATATGTTACAGCATACTGACAGATACGCGTTGATGTATAAGTGTATCCAATGTATTGAAGGAAGATATTATCCTGATGAGTTTTCGATAGAGTATCATACTAAGATTGTGCATAATAGACCGTTTGAGAAGAAATTTAAATATTTGGAAATGGTGATACTACCAAAGCAGTGCCTAGAAAAGTCTTCTAAAACGGCGAAAGTCGCAACGGCAAAAGTCGCAACGGCAAAAAATTCAGCCAAGACCAAAAACGGACTGGCAAAAGAAATAGCAAATTCCAAGATATTCGTACCGTCAACAAAATTCAGGAGTACACACAAACAGACGGAGCTACCGTTGGATGTGGTGGTGAAGCAGGAGCCAGAGCAGGATGTGGATATAGACACGTTGTGTGTCTCCGACCTGTCCAGTATCAAGACTGGGGCGGTGGATGAGACGTCTCCGCATATCAAGATATCGGATATCACTAGTTTGCAGGACCTGATGACCCTGAAGACAGAGCCAGGAGCAGAGCTGGACGGCGAGGACCTCATCATCATCGAGGATAAAGCGCCACAAATAGATCTGTACTCCAGCGACAGCGATGACTACAGAATGGAGACTGGTGGAGGAAAGAAGAAAAAACAGAAGCGCATAACCTGCATATGCGGCTACATGGACATCCGCAGCCGTATAGCCGCTCACAAACTCGGCTGCATAGCGACGCAGGCGCGCCGCGCCGCCGCCGGGGTCGGGGGGCACGGGTCTCTCCTCGTTGAGCACGGGTCTCTCCTAGTTAAGCACGGGTCTCTCCTCGTTAACATCACGTGCATATGCGGCTACATGGACATCCGCAGTCGTATAGCCGCTCACAAACTCGGCTGCATAGCGACGCAGGCGCGCCGCGCCGCCGCCGGGGGTGGGGGGCACGAGTCTCTCCTCGTTACGCACGGGTCTCTCTTCGTTGAGGACGGGTCTCTCCTCATTGAGCACGGGTCTCTCCTAGTTGAGCGCGGGTTTCTCCTCGTTAAGCACGGGTCTCTCTTCGTTGAGCACGGGTTTCTCCTAGTTGATCACGGGTCTCTCCTCGTTGAGCACGTGTCTCTCCTCGATAACATCATATGCATATGCGGCTACATGGACATCCGCAGTCGTATAGCCGCTCACAAACTCGGCTGCATAGCGACGCAGGCGCGCCGCGCCGCCGCCGGGGTTGAGCACGGGTCTCTCCTCGTTGAGCACGAGTCTCTCCTCGTTACGCACGGGTCTCTCTTCGTTGAGCACGGGTTTCTCCTAGTTGATCACGGGTCTCTCCTCGTTGAGCACGGGTCTCTCCTCGTTGAGCACGGGTCTCTCCTCGATAACATCATATGCATATGCGGCTACATGGACATCCGCAGCCGCATAGCCGCGCATAAACTCGGCTGCACCGCGACGCAGGCGAGCCGCGCCGCCGCCGGGGGTGGGGGGGAAAACAATGACAAATCAGACCTCAGTGATGACTCTGATGATGATCATCTTGAAATTGATGATGAGAATCTGCCGCACGTCAGTGATGAAGAGTGGCAGGAGGGGGCGCCTCTTGAGAAAAAGGGTAAAGGCGGTCTTCGATACACATGTCACTGCAAGAAAGTCTTCACCGGCACTTTAGCTGCGTTCAGACGTCACAAGAAAGCCTGCGTAGTCGTCTCGAAGCTCAAGAAGCAGACGAAAGACGCTAAACGAATCGCAGAATATACTTGTACAAAGTGTGGCACCACATTCAACAGTCTACTGAGATATTGCAAGCATCTGAACCGGGTACATTACTTCCAGAAGAATGTGTGTCCACAGTGCTTGTTTATGGCTGATAATCTTATGAAACTGACGAGTCATGTGACCATGCATGTCAGTAGGAGTTGTCAGAAGATAAGAGTGATCAGTGAGACGCAGGAGTGGTCCAAGTGTAATAAGTGCAAGATTTGTAAGAAGCCGGTCGAGAAGAAGGATTTTTTTAAGCATTGGGAGTCCCATCTGATCCTGAAGCCGGGAGATATGACGCGAGGGAGAGACAGTGACGGTCTACCAGAGGAGGAGGGCCAGTTCATCATGCATCAGACGCCGCCCGCCCGCGACCAGGCCGCGCCCGTGTACGGCGCCGAGGTGCTGCAGCGGGCGCTGGGTGAGTGTTATACTGCACAGCGAGGGTCTGCAGGAGGAGGGCCTGGTCGTCGTGTCACACCCGCCCGCCCGCGACCAGGCCGCGCCCGTGTACGGCGCCGAGGTGCTGCAGCGGGCGCTGGGCCGCGCCCGTGTACGGCGCCGAGGTGCTGCAGCGGGCGCTGGGTGAGTGTTATACTGCACAGCGAGGGTCTGCAGGAGCAGGGCCTGGTCATCGTGACACACCCGCCCGCCCGCGACCAGGCCGCGCCCGTGTACGGCGCCGAGGTGCTGCAGCGGGCGCTGGGTGAGTGTTATACTGCACAGCGAGGGTCTGCAGGAGCAGGGCCTGGTCATCGTGTCACACCCGCCCGCCCGCGACCAGGCCGCGCCCGTGTACGGCGCTGGGTGAGTGTTATACTGCCCAGCGAGGGTCTGCAGGAGCAGGGCCTGGTCATCGTGTCACACCCGCCCGCCCGCGACCAGGCCGCGCCCGTGTACGGCGCCGAGGTTCTGCAGCGGGCGCTGGTGTGGCTCCAAGCGCCGTCCGGCCGCGGCGCGGTCGACGAGAAGACGTGCGTGTTCTGCGCGCGCCGGTTCGCGCGCAAGAACGACAGCAAGCGGCACGTCATCGAACACTTGCTGCAAGATGCGTACGCGCACCGGCCCGAGTACAGGGCGCTGCGGTGCCAGATATGCGGCATCGGATTCCCGAAGGATGACAAGGGGAAGCGAGAAAGGTGGGAGACAGATGGGGGAAGGGGGGAGCGAGAAAAGACGTGCGTGTTCTGCGCGCGCCGGTTCTCGCGCAAGAACGACAGCAAGCGGCACGTCATTGAACACTTGCTGCAAGATGCGTACGCGCACCGGCCCGAGTACAGGGCGCTGCGGTGCCAGATATGCGGCATGGGGTTCGCGAAGGACGACAGGTTCAAACACCATATGAGAGAACATGCCGGTCTACCCGTCTACCAGTGCAACCTGTGCGGCAAGTCGTTCAGCGACTCGAGCAACTTCTGCAAGCATCGCAAGGTGCACGGCTTGTCGCTGATGCGGTGTTCCGTCTGCGAGAAACTGTTCCATAACTCTAATCATCTCGAACGGCATATGGAGATGCACGAAAAAACAAAGCCGATCGTGTGCGACACGTGCGGCAAGGTATTCTTCACGGTGTCTGCGCACAAGAAGCACGTGCGCATCGTACACGAGCGGCACAAGTCGCGCGTGCTGTGCCAGGTCTGCCGCGCCAGCTTCACGCGGCTCAAGGACAAGTGGGATCACATGTGGCTGGTGCACAAGGAACGCAAGTTCAACGCGGACTGTCCGTTATGCACGAGCTCGTTCCGACGGTTTGCGGACGTCAAGACGCACGTGCGGGTCGTCCACAATAAAAGCGTGCGGCTAGGCACCGATCAGCGCATGGTTGTGTATTGA
Protein Sequence: MLENSRKRARKSKLEVREGVELEEATVLYMEKIETKIKDEPMIDVGPTKLLGTSKLFRDPFEDVNDAAMPTIDHKPKMEFSVKIEVEEFDEAEMKEIQERNNQIEANNVTIPENNYSKGSNCAATSGVQEIKSTISKAKNDKEIGTGTKQTVSSKEFKEYITNRLMILKVTERLVKSDQAVDRIIAIGVRNYVGRILEEPYKEPRDVLLCKALEDWQVWHLENSAVRDIPLIYKCYICGKTWWYLYDFREHILLHTKLKNFEVSLESNNDECCLICFQLDIIYNDVELPETSCDRCEKAAESHEFIDNEPYMCLGCKTTFSTCTQLKLHENKCPQFKNQFFPNATEVHKCSICIYECPTEKSLSDHMIRRHAVRSDAVTTWDVKKCSVCSRSYILMALHICVRKTNNYGCNYCGRSFQKKVYKEIHMASCEKETECRLCDKPLLARCMEHSHMLQHTDRYALMYKCIQCIEGRYYPDEFSIEYHTKIVHNRPFEKKFKYLEMVILPKQCLEKSSKTAKVATAKVATAKNSAKTKNGLAKEIANSKIFVPSTKFRSTHKQTELPLDVVVKQEPEQDVDIDTLCVSDLSSIKTGAVDETSPHIKISDITSLQDLMTLKTEPGAELDGEDLIIIEDKAPQIDLYSSDSDDYRMETGGGKKKKQKRITCICGYMDIRSRIAAHKLGCIATQARRAAAGVGGHGSLLVEHGSLLVKHGSLLVNITCICGYMDIRSRIAAHKLGCIATQARRAAAGGGGHESLLVTHGSLFVEDGSLLIEHGSLLVERGFLLVKHGSLFVEHGFLLVDHGSLLVEHVSLLDNIICICGYMDIRSRIAAHKLGCIATQARRAAAGVEHGSLLVEHESLLVTHGSLFVEHGFLLVDHGSLLVEHGSLLVEHGSLLDNIICICGYMDIRSRIAAHKLGCTATQASRAAAGGGGENNDKSDLSDDSDDDHLEIDDENLPHVSDEEWQEGAPLEKKGKGGLRYTCHCKKVFTGTLAAFRRHKKACVVVSKLKKQTKDAKRIAEYTCTKCGTTFNSLLRYCKHLNRVHYFQKNVCPQCLFMADNLMKLTSHVTMHVSRSCQKIRVISETQEWSKCNKCKICKKPVEKKDFFKHWESHLILKPGDMTRGRDSDGLPEEEGQFIMHQTPPARDQAAPVYGAEVLQRALGECYTAQRGSAGGGPGRRVTPARPRPGRARVRRRGAAAGAGPRPCTAPRCCSGRWVSVILHSEGLQEQGLVIVTHPPARDQAAPVYGAEVLQRALGECYTAQRGSAGAGPGHRVTPARPRPGRARVRRWVSVILPSEGLQEQGLVIVSHPPARDQAAPVYGAEVLQRALVWLQAPSGRGAVDEKTCVFCARRFARKNDSKRHVIEHLLQDAYAHRPEYRALRCQICGIGFPKDDKGKRERWETDGGRGEREKTCVFCARRFSRKNDSKRHVIEHLLQDAYAHRPEYRALRCQICGMGFAKDDRFKHHMREHAGLPVYQCNLCGKSFSDSSNFCKHRKVHGLSLMRCSVCEKLFHNSNHLERHMEMHEKTKPIVCDTCGKVFFTVSAHKKHVRIVHERHKSRVLCQVCRASFTRLKDKWDHMWLVHKERKFNADCPLCTSSFRRFADVKTHVRVVHNKSVRLGTDQRMVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -