Hcom008636.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hesperia comma
Gene Symbol
-
Assembly
GCA_905404135.1
Location
FR990039.1:369762-382763[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0089 1 10.7 0.3 5 23 19 38 6 38 0.89
2 21 0.0014 0.16 13.2 1.4 1 23 47 69 47 69 0.98
3 21 7.3e-05 0.0084 17.3 0.0 2 23 111 132 110 132 0.97
4 21 8.2e-05 0.0095 17.1 0.4 1 23 138 160 138 160 0.99
5 21 1.4e-05 0.0017 19.5 0.2 1 19 166 184 166 186 0.98
6 21 9e-06 0.001 20.1 0.5 1 19 334 352 334 355 0.95
7 21 1.4e-05 0.0017 19.5 0.2 1 19 374 392 374 394 0.98
8 21 1.4e-05 0.0017 19.5 0.2 1 19 412 430 412 432 0.98
9 21 1.4e-05 0.0017 19.5 0.2 1 19 450 468 450 470 0.98
10 21 1.4e-05 0.0017 19.5 0.2 1 19 488 506 488 508 0.98
11 21 1.4e-05 0.0017 19.5 0.2 1 19 526 544 526 546 0.98
12 21 1.4e-05 0.0017 19.5 0.2 1 19 564 582 564 584 0.98
13 21 0.0035 0.4 12.0 0.2 1 14 602 615 602 616 0.92
14 21 2.1 2.4e+02 3.2 0.0 6 17 653 664 651 665 0.88
15 21 9e-06 0.001 20.1 0.5 1 19 690 708 690 711 0.95
16 21 0.00038 0.044 15.0 0.1 1 17 730 746 730 747 0.92
17 21 9e-06 0.001 20.1 0.5 1 19 772 790 772 793 0.95
18 21 9e-06 0.001 20.1 0.5 1 19 812 830 812 833 0.95
19 21 9e-06 0.001 20.1 0.5 1 19 852 870 852 873 0.95
20 21 4.5e-06 0.00052 21.1 0.4 1 23 980 1002 980 1002 0.94
21 21 3.2e-05 0.0037 18.4 0.7 3 23 1010 1031 1008 1031 0.97

Sequence Information

Coding Sequence
ATGGCAGAGAACATGTTTTACTGTTCGTTCGTCAGCATCCACTACATTATCTGTGAATGTGGTGAAACGTTTCCAACCGAAGAAGCTCTGAAGGTGCATCTTGAAAGAGATCATCAAAAGAGACTCGAGGAAAATGAATACAAGTGTGAAACGTGCGAGAGAGTGTTCTCTACGGCGCGCGCCTGTCTGGTCCACCAGCGGGTGCACACGGCGCCGCGCCCCGTGCGCCGCGCGTTCCCCCCGGAGCGCCCGGAGCGAGTGGAGCGAGTGGAGCGCCCGCGCGCCGAGCCAAACAAGCGGCCCAAGAAATCCTACAACGTCAAGAATATAGTGTGCGAGGTCTGCGGGAAGCGGTATTCGTCGAACGCGGCGCTGGGCTACCACCAGCGCGTGCACACCGGCGAGCGGCCGTACCAGTGCGCCATCTGCCCCAAGAACTTCACCATGCCGCTCTTCCTGCAGATCCACACGCGCACGCACACGGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAGAAGCCGTACGAGTGCCCGCACTGCCCCAAGGCGTTCAGCAACAAGGCCGCGCTGCTGCGCCACGACCGGGTGCACACGGGCATCAAGCCGTACGGGTGCCCGAAGTGCGGCAAGTTCTTCACGCAGTCCAACTCGATGAAGCTGCACGTGAAGACGGTGCACCTCAAGATGCCGGCGCCCTACAAGAGCAAGAGCCGCCGCCTCAAGGAGCTGGCTAGGAAAGGACTGTCGGAGGGCGGAGCGCCCGCGGTGAAGGCTGAAGCGATCGAGACGGTGGAGACAGTGGAGGCTGTGGATATGGAGGCTGTGGAGGCGGCGGTGAAGGCCGAGCCTGACTACCAGCTGTACTACGACCAGCACGTAGAGATCGGCCACCCGGAGATCACGATGTACGAAGTGGAGGACCAGGACAACGTGGAGGTGCTGTATGAAGAGGACCTCAAAGAGGAGGTGTTGTACCACATGGAGGGCGACGGCGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGACGGCGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGAGCTGAAGGAGGAGGTGCTGTACCACATGGAGGGCGAGGACGAGGGCGAGGTGCTCTACCGCATCGAGGACGGCGGGGACACTCTGCAGGTCAGACGGACAACCTAG
Protein Sequence
MAENMFYCSFVSIHYIICECGETFPTEEALKVHLERDHQKRLEENEYKCETCERVFSTARACLVHQRVHTAPRPVRRAFPPERPERVERVERPRAEPNKRPKKSYNVKNIVCEVCGKRYSSNAALGYHQRVHTGERPYQCAICPKNFTMPLFLQIHTRTHTGEKPYECPHCPKAFSNKAALLRHDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPRRSATRPRCCATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQGVQQQGRAAAPRPXXXXXXXXXXXXXXXXAVRVPALPQGVQQQGRAAAPRXXXXXXXXXXXXXXXXXGEKPYECPHCPKAFSNKAALLRHXXXXXXXXXXXXXXXXXGEKPYECPHCPKAFSNKAALLRHDRXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHDRXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHDRXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHDRXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHDRXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHDRXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPKAFSNKAALLRXXXXXXXXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHXXXXXXXXXXXXXXXXXGEKPYECPHCPKAFSNKAALLRXXXXXXXXXXXXXXXXXXXXXXXPYECPHCPKAFSNKAALLRHXXXXXXXXXXXXXXXXXGEKPYECPHCPKAFSNKAALLRHXXXXXXXXXXXXXXXXXGEKPYECPHCPKAFSNKAALLRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRRSATRPRCCATXXXXXXXXXXXXXXXXGEKPYECPHCPKAFSNKAALLRHDRVHTGIKPYGCPKCGKFFTQSNSMKLHVKTVHLKMPAPYKSKSRRLKELARKGLSEGGAPAVKAEAIETVETVEAVDMEAVEAAVKAEPDYQLYYDQHVEIGHPEITMYEVEDQDNVEVLYEEDLKEEVLYHMEGDGEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQEELKEEVLYHMEGDGEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQELKEEVLYHMEGEDEGEVLYRIEDGGDTLQVRRTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-