Htar026714.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Herminia tarsipennalis
Gene Symbol
nfxl1
Assembly
GCA_945859575.2
Location
OX243849.1:22337369-22339843[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1 3.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.0072 2.7e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 19 1.6e-07 0.0059 17.6 15.9 3 19 186 202 185 202 0.95
4 19 1 3.8e+04 -4.6 0.9 6 10 227 231 227 233 0.48
5 19 4.2e-07 0.016 16.3 14.4 1 19 237 255 237 255 0.93
6 19 0.34 1.3e+04 -2.6 1.9 6 10 280 284 279 284 0.90
7 19 1e-10 3.9e-06 27.8 12.7 1 19 290 308 290 308 0.99
8 19 3.3e-05 1.2 10.2 21.3 3 19 345 361 337 361 0.86
9 19 1 3.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 19 3e-06 0.11 13.5 18.3 1 18 395 412 395 413 0.97
11 19 1.6e-10 6e-06 27.2 13.9 1 19 422 440 422 440 0.99
12 19 0.00022 8.3 7.6 7.2 10 19 489 498 487 498 0.91
13 19 4.3e-05 1.6 9.8 6.7 1 12 508 518 508 518 0.96
14 19 0.18 6.6e+03 -1.7 3.3 14 18 547 551 547 552 0.85
15 19 0.32 1.2e+04 -2.5 0.1 7 11 567 571 567 573 0.81
16 19 2.7e-06 0.1 13.7 4.8 1 11 588 598 588 599 0.97
17 19 2.7e-05 1 10.5 16.1 3 18 629 645 628 646 0.83
18 19 1 3.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 19 3.9e-05 1.5 10.0 12.4 1 16 687 701 687 705 0.93

Sequence Information

Coding Sequence
ATGGCGCGTCGGTACAGAGATGCAGCTGCAAAACTGCAGCAAAATGTGCAGAAACATTTAAAAGGAATGAAGGAACTTTCATCTTCTGAAGACGAGGAACCCTACGAATCCAGCGTCCTCGATGGTGTATTCCAGAGTTACTGGCGAGGCGGCGGCGACACGTCCCTGTTAAACAGAACTAAGAATCTTCTAGAAGAAGCCATCAGCGGTCGATCTGTAACGTGTCTAATATGCATAGGATCAATCAAAAGAACTGACGCTATTTGGACTTGTGATCATTGTTTTTCTTATTTTCATCTATCATGCATACAAAAGTGGTCGAATGACAGCATTAGCTTACGTAGCGAAGAGAATCACGGTCCAATTGCTGTAGTTAAACCCAAAAAAATCGAATGGTGTTGTCCGAAATGTCGGCAGTCGTATTCTAAAGAAGAGATCCCGCGGAAATATCGTTGTTTTTGCGGTAAAACCGATGATCCGCAGTACCATCCATGGCTCATACCCCATACATGTGGTGAAGTGTGTGAAAAAAGATTATCTCATGGTGATAATTGTAAACACAAATGTTTACTTCTCTGTCATCCGGGCCCTTGTCCTCCCTGTCCTCAAACTGTTAATGGTATCTGTTACTGTGAAAAGGAACGCAAACGAGTAAGATGTAGTGCCGCTAAGTGGTCTTGTGGACAAACTTGCAAGAGGACACTTTTATGCAATACTCATAATTGTGAAAATGAGTGTCATGATGGAAAATGCCCTCCATGTACCTATACTAGCGTTCAGACATGCCAGTGTGGCTCTCAGAAAGCTAAAAGACCCTGTAATGACCCATTTTGGCAATGTGAAAAAGTATGCAATAAATTATTCACATGCGGTTACCACAGATGCGAAAAAGTCTGCCATTCAGGTGACTGCGGCTCTTGCCCTAATTCAGGTATGTCATCATGCCCATGTGGGGCAAATCAACGTTTTGTGCAATGTCCAGATGTGATGGAAACATGCTTAGGCACATGTGGCAGGAAACATGATGACTGTGAACATCACTGTCCAGAGAAATGTCACAAAGGTCAGTGCCCACCGTGCCAGGTCCTGATACAGAAACAATGTCTATGCTCAACACATGAACGATCTTTACCTTGCAGCAAGGAATTTAAATGTGAAACAAAGTGTAGAGGAACCAGATCTTGCGGCAAACATGGCTGTGCACGAAAATGCTGCAATGGTAACTGTCCACCATGTGAGAAAATATGTGACAAATCACTTCAGTGTGGTCGACACAAATGCACAAGTATTTGCCACCGTGGTCCTTGCTACCCGTGCCCAAGAGAATCAAAAGTCACTTGTAGATGCAAAGAGACGTATGTAACAGTCTTATGTGGTAGAGAGAGACAAACTAAACCTCCTAAATGTACTTTAGTGTGCAAAATCAAATATAAATGTGGCCATGTTGAAGAAAATAGGCACTCTTGTCACTTTGGAGACTGTCCACCTTGCAAAGCAGTCTGTAACAAACAATATCCAAAATGTGGACACAATTGTGAAGCTGTGTGTCATGAATATGTAGCAGTTGTCTTCAAACAGGTTGAAAAGCCTGCTACTCCATGGGAAGTTCAACCACCAAAAACTAAAATAATGACTCTTGAATGTCCTCCGTGCAACACACCTGTTCCAATAGTATGCTTTGGTGAGCATGAGACTGATGAGCAGGCTTGTCATGCTGCTGCACGGAGACCGTGTGGAAGAGAATGTGGACGTCCTCTTGCTTGCGGTAATCACAAGTGCTCTTTACTCTGTCATCTTCACAATCCTCTACCAGAGTATCCAAATGTTCCGTCCAGTTGCAGACAATGTAACCAAGAATGTTTAGTACCTCGTCCAGATAAATGTACCCACAAGTGTTCAAAACGGGCTTGTCACCCGGGACCATGTCCTCCTTGTGAAATTCTTGAAAGACTGCCTTGCCACTGCGGCGTTACAGAAATATATCTACGCTGCCGTGAAATATCAATTGCTACTGAAGAAGCTTTGTCATGCAAGCAACAGTGTCCAAAGAATTTAGAATGTGGTCACCGTTGCCGTAACAACTGTCACTCGGGTTCCTGTGGAACACAGATATGTATTAAGAAGACCAAAGTACACTGTCCTTGTGGTAATATTAAGAAAGAGGCGCCATGTAATGCTGTTCGTAATGGAGAAACGAAATTAGTTTGCGATTCAAGTTGTGAAGCTAAGAAAATCGCGGCTAAAATTGAGAGTGAGAAAGAAAAGCAGCGATTGAAAGAATTAGAAGAAGAAAAGAATAGAAAAGAGCTGGCTGAATATGAATGGAAGTTAAGTGGCAAAAAGAAGAAATATAAAGAGAAAAAAGTGATTGTAAATAAGGATGATAGGGGAATTTTGCGAAAGTATTGGATACCAATATTGTCTATACTTATTGCTATTATAGGAGCTTCATATTATATATTTTACCAATCATAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKGMKELSSSEDEEPYESSVLDGVFQSYWRGGGDTSLLNRTKNLLEEAISGRSVTCLICIGSIKRTDAIWTCDHCFSYFHLSCIQKWSNDSISLRSEENHGPIAVVKPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPQYHPWLIPHTCGEVCEKRLSHGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQTCKRTLLCNTHNCENECHDGKCPPCTYTSVQTCQCGSQKAKRPCNDPFWQCEKVCNKLFTCGYHRCEKVCHSGDCGSCPNSGMSSCPCGANQRFVQCPDVMETCLGTCGRKHDDCEHHCPEKCHKGQCPPCQVLIQKQCLCSTHERSLPCSKEFKCETKCRGTRSCGKHGCARKCCNGNCPPCEKICDKSLQCGRHKCTSICHRGPCYPCPRESKVTCRCKETYVTVLCGRERQTKPPKCTLVCKIKYKCGHVEENRHSCHFGDCPPCKAVCNKQYPKCGHNCEAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCNTPVPIVCFGEHETDEQACHAAARRPCGRECGRPLACGNHKCSLLCHLHNPLPEYPNVPSSCRQCNQECLVPRPDKCTHKCSKRACHPGPCPPCEILERLPCHCGVTEIYLRCREISIATEEALSCKQQCPKNLECGHRCRNNCHSGSCGTQICIKKTKVHCPCGNIKKEAPCNAVRNGETKLVCDSSCEAKKIAAKIESEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKVIVNKDDRGILRKYWIPILSILIAIIGASYYIFYQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
-
80% Identity
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