Htar031555.1
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- ZNF296_1
- Assembly
- GCA_945859575.2
- Location
- OX243854.1:7137829-7158686[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.39 41 5.9 0.2 3 23 128 148 126 148 0.96 2 13 0.0035 0.37 12.4 2.8 1 23 268 290 268 290 0.99 3 13 5.4e-05 0.0057 18.1 0.4 1 23 296 319 296 319 0.97 4 13 0.0015 0.16 13.5 1.3 1 23 324 347 324 347 0.94 5 13 0.00014 0.015 16.8 0.7 2 23 506 527 505 527 0.98 6 13 2.8e-05 0.0029 19.0 1.7 1 23 533 555 533 555 0.98 7 13 0.035 3.7 9.2 3.8 1 23 1316 1338 1316 1338 0.95 8 13 0.00082 0.085 14.4 1.7 1 23 1344 1366 1344 1366 0.98 9 13 0.0011 0.11 14.0 2.1 1 23 1375 1397 1375 1397 0.98 10 13 0.0012 0.12 13.9 3.0 3 23 1445 1465 1444 1465 0.97 11 13 0.007 0.73 11.4 3.2 1 23 1482 1504 1482 1504 0.96 12 13 2.9e-06 0.0003 22.1 1.0 1 23 1510 1532 1510 1532 0.98 13 13 3.2e-07 3.4e-05 25.1 3.1 1 23 1538 1561 1538 1561 0.98
Sequence Information
- Coding Sequence
- ATGAACCAAGGAACAGTGGATCTGGACCCGCTAAGCACATACGAATACCCAATGTATAATAGTTACCATCAAATAAGCAACCCACAACCATACCCTTACCATGTTAAGTTAGAAGAAACGTTATACCAAGCGAACCAAAACTGTAATACTAGTTACACGGAGAATGTCCCACCACAGCCACCAGAAAACACACCAACAGAAACGAAAGTTGATCCTGTTAACGATGTAAAATTTGACCCAGTTACCAGTGTAAAAGAAGATCCGTTTAATAACGCAACAGAAACCAAACCAGATATAAGCATTAATAAGAAACAAGATAAAAAGAACGGCAGGAATTACTGTTCTGAGAAGATAAACGATTCAAGTTATCCATTTTACGGTTGTTCCGTTTGTAATATTAGTTACACAGCGTTACACGAATTAGATCAACATGTAACTGTACATAAAAATAGAATGACAAGTTATAGGTTAAGGTTAAGGAATCAATTTAAAAAGAAACAAATTAAAAAGGAAAAGAAAAAAATTAAAAAGTTAAAAAAAGTTAAGCAGGAAACGGAATTGGAAATAGAAATTAAGCCGGAGGATGGTTACATAGGTAACGAGAAAGCAACGGACTACGTTGAGAGTGCTAACGGAACAAATACCAACTCGCAGAATAACGATAATGTTACAAGTAATCCTAATGACAACGATACAAATCCAGTAACTAAAGACAAAACTTCGGAGAATAAGGAGGAATGTTGTAAAGACAATGATAACGATCACATAGATGAGGCAGAATTAAATAACTTAGAGAAAATATACAAATGTTTTGCTTGTCAGAAGCAGTTTACTTTAAGTTATTATTTAAAGCTACATGTTAGATCTCATACTGATGAAAAACCCTACACTTGCTCTGTGTGTGGACAATCGTTTATAACCGCAAGCAAACTAGGGAGGCACAACAAGAGAATACATCTCGCCGCACGATTCCAGTGTAGAATATGCTTTAAAATATTTTCTAGGTTTGAATTACTGACAGCCCATTTTGATAAAATACACGCTGATGAAAAATTGGAAGGTGAACCGTATGATTACAACGCAATACTTCCGTATCTGAAAGAGTTAGAGGAACAGTTGAAAGAGCAGTCGGAAGCTAAACAGAAGAAGGAAGATCCGTGGTTTGACTGCGGAATTGACAGTCAAGTTGACAGTGTTAAAGAAGAGAACCAAGAAGAAGATAACAAAATATTGCCAGAGATAATTCTAGAGGAAGTCAAAGTGGATGGTTTTGAAGTTGAAATTAAAGTGAAGCAAGAAATAGAAGATGTTAATGATAATGCTGGTGATGACCACGGTAATCATGTTAATGGTGATGACTTTAGAGATGATGACAATGTTAAAGATGAAGCTTTTAAGGATGATAGCCACTCCGACGAAGACTACTTCCCATCAAATACATGGGCATCAACACCAAAATGCGACCCGTCCCCTCCACCCACCCCTAAAAGGAAGAAGTCTGCTTTCAAAACGAAGACCTGCCAGATATGCAATAAGGAGATCAGCTCGGCCTCCTACATGAGGGTGCATATGAGGACACATACAGGAGAAAGACCGTTCAAATGTTATAAGTGTGGCAGAGGGTTTATAACTAGCAGTAAAATGAATAGACATGTGCTGACTCATGGGAATGATGGTACGAGTGCTGGCAGCAACAACTCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCTCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATGTTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTAGCAGCAACAACCTACCCCCTCCTTCATATTTGCATCCCCTATGTACGAGTGCTGGCAGCAACAACCTACCCCCTCTTTCATATTTGCATCCCCTATGTACGAGTGCTGGCAGCAACAACCTACCCCCTCTTTCATATTTGCATCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTCCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTCCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTAGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCTCCTATGTACGAGTGCTGGCAGCAACAACTTCCTTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGAAGCAACAACCCCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACCACCTACTCCCTCCTTCATATTTGCCTCCCTTATGTACGAGTGCTGGCAGCAACCACCTACTCCCTCCTTCATATTTGCCTCTCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCTTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGAAGCAACAACCTACCCCCTCCTTCATATTTGCCTTCCCTATGTACGAGTGCTGGCAGCAACAACTTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGAAGCAACAACCTACCCCCTCCTTCATATTTGCCTTCCCTATGTACGAGTGTTAGCAGCAACAACCTCCCTCCTTCATATTTGCCTCCCCTATGTACGAGTGCTGGCAGCAACAACACCCGAATTAAAGAAGAGAATATAAAACAAGAAAATGGAGAAGTGAAAGCTGAAGATGATGACGTACCTACTGAAGAAGAGAATTCAGAAGCTGCAAAAACTACAAAGAAAAGAAAATTAAAACGGAAGCTTCCAAAAGACTTGGTGAAAGGTGAAGAGAAAGTCAGAAGAAAACATCAGAAGAGACCACATTCTTGTGAATATTGTAATCAGAAATTCCTTCACCTAAACATGTTAGAAGTGCACAAAAAGTGTCACGAAGGCGAAGAGTTAGTGTTTAAATGTCACTATTGTCTTGAAGAGGCACTTGACGACACGGCACTGAAGGAACATGAAGCCACTCATGGTGGCCCTAAACCTTACCTCTGTACCATATGTGGGAAGAATTATAAGAAAAGAGAAACTATGGTATACCATAGAAAACACCATCAACCAGAAAGAGAATTCATATGCGACATTTGCTCGAAGCGTTTTAACGCCGCTTGCAAACTATCAAAACATATGGCGACACATCGATCAGACAAATTTGTGCTTAGATACGAGTGCCCTGTCTGCGCACATATGTTTAATACTAAATATCATGTGCAGATGCATCTCGCTACACATCAGAAAGAAGGGCTGATTTTAGAATCGAATCGCAATGAAATTCTCGCTATGGTTTTACAAAACGCTCTGAAAATACCGAAACAACCGGACGCGGCCTCAAACTTAACTGAAATTACTCCATCGGATGaaagATATCGCATTTGCAAAATATGCGGAGAAACATTCCACCATTTCTACTATTTAGAAGAACATCTAAAAAGCCACGGCTCAAAAATAGCCATAGACGACACGAATAAGGCCGAAGAAAAGAAATACATCTGCGAAATTTGCAACAAAGGTTTCAAATTGCACTATTATTTAAAATTGCACAGTTTTACACATTCGAAGGAAAAGCCATTTATGTGCCAGCAATGTGGAAAAGGTTTTATAACAAAAGGAAAACTGAAAAGGCATTTGGAAACTCATTCCGGTTTGAAAAAATACCAATGTCATATTTGTTATAAGTTTTTCACGAGACCTAGTTATTTAAGAATTCATATCAGGACAATTCATGCAAACCAAGATTTTAACTATAGATATGAGAAGTCATGTATGTCTTTGACTACTATTTCTGCTTTAAATCAATTATCTGATAGTCAGAATAGTGGTGACCAGTAA
- Protein Sequence
- MNQGTVDLDPLSTYEYPMYNSYHQISNPQPYPYHVKLEETLYQANQNCNTSYTENVPPQPPENTPTETKVDPVNDVKFDPVTSVKEDPFNNATETKPDISINKKQDKKNGRNYCSEKINDSSYPFYGCSVCNISYTALHELDQHVTVHKNRMTSYRLRLRNQFKKKQIKKEKKKIKKLKKVKQETELEIEIKPEDGYIGNEKATDYVESANGTNTNSQNNDNVTSNPNDNDTNPVTKDKTSENKEECCKDNDNDHIDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAARFQCRICFKIFSRFELLTAHFDKIHADEKLEGEPYDYNAILPYLKELEEQLKEQSEAKQKKEDPWFDCGIDSQVDSVKEENQEEDNKILPEIILEEVKVDGFEVEIKVKQEIEDVNDNAGDDHGNHVNGDDFRDDDNVKDEAFKDDSHSDEDYFPSNTWASTPKCDPSPPPTPKRKKSAFKTKTCQICNKEISSASYMRVHMRTHTGERPFKCYKCGRGFITSSKMNRHVLTHGNDGTSAGSNNSPPSYLHPLCTSASSNNLPPPSYLPPLCTSASSNNLPPPSYLHPLCTSASSNNLPPPSYLHPLCTSASSNNLPPPSYLHPLCTSASSNNLPSPSYLHPLCTSASSNNLPPPSYLHPLCTSASSNNLPPPSCLHPLCTSASSNNLPPPSYLHPLCTSASSNNLPPPSYLHPLCTSASSNNLPPPSYLHPLCTSASSNNLPPPSYLHPLCTSAGSNNLPPLSYLHPLCTSAGSNNLPPLSYLHPLCTSAGSNNFPPSYLPPLCTSAGSNNSPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNSPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNFPPSYLPPLCTSASSNNFPPSYLPPLCTSAGSNNFPPSYLPLLCTSAGSNNFLPSYLPPLCTSAGSNNPPPSYLPPLCTSAGSNHLLPPSYLPPLCTSAGSNHLLPPSYLPLLCTSAGSNNFPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNFPPSYLPPLCTSAGSNNLPPPSYLPSLCTSAGSNNFPPSYLPPLCTSAGSNNLPPPSYLPSLCTSVSSNNLPPSYLPPLCTSAGSNNTRIKEENIKQENGEVKAEDDDVPTEEENSEAAKTTKKRKLKRKLPKDLVKGEEKVRRKHQKRPHSCEYCNQKFLHLNMLEVHKKCHEGEELVFKCHYCLEEALDDTALKEHEATHGGPKPYLCTICGKNYKKRETMVYHRKHHQPEREFICDICSKRFNAACKLSKHMATHRSDKFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLILESNRNEILAMVLQNALKIPKQPDAASNLTEITPSDERYRICKICGETFHHFYYLEEHLKSHGSKIAIDDTNKAEEKKYICEICNKGFKLHYYLKLHSFTHSKEKPFMCQQCGKGFITKGKLKRHLETHSGLKKYQCHICYKFFTRPSYLRIHIRTIHANQDFNYRYEKSCMSLTTISALNQLSDSQNSGDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -