Htar029328.2
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- Smarcc2_1
- Assembly
- GCA_945859575.2
- Location
- OX243852.1:11537553-11547789[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-15 3.5e-12 47.3 0.1 3 44 116 157 114 159 0.95
Sequence Information
- Coding Sequence
- atgtacagAGATACTCTGCACATTCGTGCGCCGGCTTGCCCTGAAGCCTGGTACCTGCCTGAGTTGGAGGCAGAATCTCGTCCAACAGCCATGGGCCCGCCTCCCACGTCTCACTTCCACGTGCTGTCCGACACACCGTCGGGTCTGCAACCGCTGGTCACTCGCCCTACACAGCCGAGACCCGCGGAGAACGTCCCCAAAGTGGAGCCGGGCCTACCGAACGGTGCGGAGGCCGGCGCCGCGCCGCCCGCCGCCGCGCCCGTCAAGCCGGAGCCCGCCGCCGCCGACATACCCGCCGCGCCCGGCCTCAAGCTGGACCAGTACCGCGGAGGCGCGCGCGGGCGCGAGTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGGGTGGCGGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCACGATCCCGCCGCCGGTGGTGTGTTAGGACCTCTGGCGTACCAACCGATCCCGTTCAGCAAGACGGGCAACCCTGTGATGAGTACTGTAGCATTCCTGGCGTCGGTCGTCGACCCGCGCATTGCCTCCAAGGCTACTAGTGCCGCTATGCAAGAGTTCGCTGCTATCAAGGACGAAGTCCCCGCAGCGATGATGGAAGCTCACGTGAAGGCGGCGGGCGCGCACGGGCCGGCCGCCGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCTGAACTGTCGCCTACTGAAACAAAGAAGGAGGGATCATCAGACATCAAGTCGGAGCCTATGGAGGTAGAAGAAAGCGAAGCTAAAGTGAAGGAGGAACCGACGGAGACGCCCCCCGCTGCGGAAGCCGATAAGGAACCTAAAGACGAACCGTCACCTCAACCTGGCAAGGAAGGAGAAAAAACCGACGCCCCAGCAACAGTAGACGCGAAGCTCCAATCTGCAGCAGCAGCAGCTTTAGCCGCAGCGGCAGTCAAAGCTAAACACTTAGCTGGTGTAGAGGAACGGAAGATCAAGTCTTTGGTCGCTCTCCTCGTTGAAACGCAGATGAAGAAGTTGGAGATCAAGTTACGGCACTTCGAAGAGTTGGAGGCTACTATGGAGAGGGAACGGGAAGGTTTGGAATACCAGAGACAGCAGTTAATTCAAGAACGACAACAGTTCCATTTGGAACAACTGAAGGCCGCTGAGTTCCGCGCCAGGCATCAGGCTCATCAACGGTTACAGGCCGAGAGCGGAGCGGCGGGCGCCGCCAGCGTGCCCGCCGCCACCCCCGCCGACGCGCCCGACGTGCCCGCGCCGCACGCCTAG
- Protein Sequence
- MYRDTLHIRAPACPEAWYLPELEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAAPPAAAPVKPEPAAADIPAAPGLKLDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDPAAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATSAAMQEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPELSPTETKKEGSSDIKSEPMEVEESEAKVKEEPTETPPAAEADKEPKDEPSPQPGKEGEKTDAPATVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAAGAASVPAATPADAPDVPAPHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -