Basic Information

Insect: Herminia tarsipennalis
Gene Symbol: Fahd2a_1
Assembly: GCA_945859575.2
Location: OX243855.1:11721452-11725435[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6e-09 7.4e-07 29.8 0.0 2 35 10 44 9 52 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6e-09	7.4e-07	29.8	0.0	2	35	10	44	9	52	0.86

Sequence Information

Coding Sequence: ATGGCAACAAAGCGACGACAGTATTCCCAAGAAGACCTTATGAAGGCCTTGAAATTTATACAGGATAAAGAAGGGTCTACTCGTGAAGCAGCAAAAAAATACAATATCCCTAGAAGTACCCTACAATTCAAGACTGAGAATCCTCATGTTAAGCCTAAATCAGGCCCCGACCCAATATTAAGTGAAGTTGAGGAGCGAGAGTTGTGTAAATTTATATCAGACTTAGCCAAACAAGGGTTTCCTTTGAAAAAAGATGATTTACTTCAGTGTGTACAAGATTTCTTAAGAAAGAACCCTAGACCGAACCCGTTTAGAAACAATAAGCCAGGAGAGACTTGGTTCAAATCATTCATGAAGCGCAATCCGATTATTACTTATCGAACATCTGAGGGAGTCACCAATGCCAGTTCTTGCGTTTCTGAACAAGATATCAGAAAATGGTTTTCAGAAATCCACCAATATTTTATTGAAAATGGTCTTGAGGATGTGCTCAATGATCCGACTCGCATTTTTATTGCTGACGAGACCGGTTTTAATATTTGTCCCAAATCAGGAAAAGTCCTGGCTGAGAAAGGAAGCAAAAATGTGTACCAAATAGAAAAGGCATCCGCTAAAGAAAATATTACTGTTATGTTTACTTTCTCCGCATCGGGCCACGTTTGTAATCCTATGGTTATTTATCCGTATAAAAGAATACCTGACAAGGTCACATTAAGCGTTCCATCTGGATGGGGAATCGGCAGAAGTGACACAGGCTGGATGACTGCTGGAGTATTCCATGACTACATCGGTAATTGCTTTTATAAAGAGCTGTTGGACAAAAATATCCAAATGCCAGTAATTTTATTCGTAGATGGACATAAGACACATATAACAATTGAGGTATCTGAACTATGCAAAAGCCTACAGATTCATTTGATCGCTCTCTACCCAAATGCTACTCGGATCTTACAACCAGCAGACGTTGCAGCCTTTAGACCCATCAAGGTTGGTTGGAGAAAGGCACTTCACGAATGGTATGCAGAGAATAATCATCAGGTATGTATGACCAAAGAAAAGTTTGCACCCTTGTTAAAGACAGTCGTTGCATCATGTGCAAAACCAGAAACATTGATCAATGGTTTCCGGATCTGTGGTTTGCATCCCTTTGAATCAAACAATGTGGATTACTCGAAATGCATACCCAACGCAAAACCATCAGAAACTGAAGCTACCGCTCTAGTCCCTGAGCCTGAAGCTCAGTTTCAACTTTCATATTCAGATTTTTGTGACACAGTAGGAATGTCGATTATAAATAAATGTGAAAGAATGTTCGAGGGACATTTAGATATACAAATTGAATCCGGTGATTTTCTAATTATATATAAGCTATGGCAGAAATTTAACGGAGCAACTGAACTCAACACTCTCTCAGTTGTTATAGAAAATAGCTGTGATGAACATGTAATCCAGACGACAGAAAAAAGTGATATTATCCTTGATGAACAAACTGGTGAACTGAAACAAAGTGTAGACAATTCAACTGAACAAATGGCTTTAATAGTAACAGAAAACGCCAACATAGACATTCCAGATAATAATATTAATGATCAACAAGAAATAATTTACGCGCAACCCGGTCCATCTAGACAATTTCACCCAAATAAAATTATAACTGTTATTTCCAACGAGCCACTATCTGATTATTTAAAGAAGAAGACACCGAAGTCACCAAAGAGGCAAGGTAAACGCCAAATAGAAAGACTGCCCTTTGCACTAACTTCCGATGTATATTTAGAAAAGATGAAGACAAAGCATTTAAAAAAAAAGGAAGAAGAAGAAGCCAAAGAACAGAGAAAAAGATTACGAGAAGAAAAGAAATTGCAGAAAGAAAACGCTGTGCCGAAAAAGAGAGAAAATATTGCGAAGAACAAGACTTATCCTTTGAAGAAGAATACATCATCAAAATGTGATAAAATTGAAATAGATTGGGAAGTAGAATTAGCAGTTGTGATTGGTAAGAAATGTACCAATATAAAAGCGGCTGATGCTTACAATTACGTATTTGGATACACTGTTGCTCAAGATATCACAAGTAGGGATTGGCAGAAGAAAAATGGTGGACAATTCTTGCTTGGTAAGAATCAAGATACGTTCAGCCCTATCGGACCATGTATCGTCACGAAAGATAAAATTGCTGATCCTCAAAATCTGGAACTCAAATGCAGTGTCAACGGTGTGGAGAAACAAAAGAGCAATACATCCAACCTTATACATAAAATACCTGACGTTATTGAAAGACTGGCCTCGGTAATGACTCTCCTACCGGGTGATATTTACATGAGTGGCACTCCTGCAGGCGTGGGCGGCAACCGCAGCCCTCCCGAGTATTTGAAGTCTGGTGATGTAATATACAGCGAAATCCAAAACATCGGTGGGTTCGAAGTTATAGTAGAAAATTTTTGA
Protein Sequence: MATKRRQYSQEDLMKALKFIQDKEGSTREAAKKYNIPRSTLQFKTENPHVKPKSGPDPILSEVEERELCKFISDLAKQGFPLKKDDLLQCVQDFLRKNPRPNPFRNNKPGETWFKSFMKRNPIITYRTSEGVTNASSCVSEQDIRKWFSEIHQYFIENGLEDVLNDPTRIFIADETGFNICPKSGKVLAEKGSKNVYQIEKASAKENITVMFTFSASGHVCNPMVIYPYKRIPDKVTLSVPSGWGIGRSDTGWMTAGVFHDYIGNCFYKELLDKNIQMPVILFVDGHKTHITIEVSELCKSLQIHLIALYPNATRILQPADVAAFRPIKVGWRKALHEWYAENNHQVCMTKEKFAPLLKTVVASCAKPETLINGFRICGLHPFESNNVDYSKCIPNAKPSETEATALVPEPEAQFQLSYSDFCDTVGMSIINKCERMFEGHLDIQIESGDFLIIYKLWQKFNGATELNTLSVVIENSCDEHVIQTTEKSDIILDEQTGELKQSVDNSTEQMALIVTENANIDIPDNNINDQQEIIYAQPGPSRQFHPNKIITVISNEPLSDYLKKKTPKSPKRQGKRQIERLPFALTSDVYLEKMKTKHLKKKEEEEAKEQRKRLREEKKLQKENAVPKKRENIAKNKTYPLKKNTSSKCDKIEIDWEVELAVVIGKKCTNIKAADAYNYVFGYTVAQDITSRDWQKKNGGQFLLGKNQDTFSPIGPCIVTKDKIADPQNLELKCSVNGVEKQKSNTSNLIHKIPDVIERLASVMTLLPGDIYMSGTPAGVGGNRSPPEYLKSGDVIYSEIQNIGGFEVIVENF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00794401;
90% Identity: iTF_00794401;
80% Identity: -