Htar032688.1
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_945859575.2
- Location
- OX243855.1:4826210-4874289[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-10 5.2e-08 33.5 0.0 1 36 307 343 307 347 0.92 2 2 1.7e-17 2.1e-15 57.2 0.0 1 43 511 554 511 556 0.95
Sequence Information
- Coding Sequence
- ATGAGGATGGACGCGAAAGCGATTAGGTTTCAGCAGTGCAACAATGTTAAAGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCCTTAATACCAAAACGGGGGGAGGGCGAACGATCCAGCGACGAGGAATCTGTCCATACAGACCCGCCTCCCGCGCTCAAAATAAAGACCATAGAGCAGATCAACGAGGACGACGCAAAGGACGAGAGGTTCGACAGAACCGGTGGCCCAGAACGGCCCGAACGTTCAGACCAGGTGGAAGACAAGCCCAGGAGGCCAGAGACCATCCTGGAGTCGTTAATCAAGAGGCCAGCGACGCAGCCCAAAGTGGAGCTTTCCGAAGAGCCATCGGATTGGAAGCCGCAAGACAAATGCTACTTCTGCACGGATGGGGAGCCTGTGCCAGAAGCGAGAGCCGGTGGAGCCACTAATCCAGCGTTACTAATCCTCTTCCATCTCTTCCTACAGAGTCCAGCGTCGGAGTCGGATAGCAGTTCGGTGTCGGGCGCCAAGTCACCGGCGGCTGCGCCACCACTGCTGCAGCATCTACTCCAGCTTCAGGCACAGAGCCCCAATACCATAGCACAGTTCCAGCAGATGATCGCGGCGCTGGCGGCGCTGGGGAGCGGGCTGGTGCCTCCGCCTCCCCTCTCACAGGCCTGGATGATGTCCAGGATCGTGCATAGACAGCAGGCTGAACGGCTACCAGAAGTGGGTGATAAGGTGCCGGCGTCTTCATCCCCCAATCAAACGGAACAGCCTCTGGACCTCAGCAACAAGTCTACATCCAGCACCAGTGGTACACCACCTCCAGATGCCAAGGTCTTTGATAACAGATTGAAGCGCACGGCTCTCGAGGCAGGCAACAGCGGCTCGCGGCGAGCGTACACCGAGGAGGAGCTGATGTCGGCAGTGCGCGACATCCAGGCTGGCCGGCTCGGCACCCGCCGCGCAGCACTCCTCTACAACATTCCTCGCTCGACCCTACGTAACAAACTCAACAAATTCGGCGCCAATCCAGAAACTGTCGACTCTGAACCTGACAGCGACGATAGAGCCGACTCGCCGCCTTCAGTCATCCTGAAGATCCCAACGTTTCCTCCGCCAGATGACAAGAGTCCTTCCCCGGCCGGAGCCACCATGTGCCCCAGCATCGCTCCCGTCACACCGGTCGGACCACCGCCGCAGCAACCGCTGCTTCTACCGCACTCTGTGTTTGCCGACCCACCCTCTACGCAACATCTCTTCACTTCCCTGAGTGACGTCATCGCTAAGAGCATCAGCCAGAAGTTCCAGCAGCCCCTCGACCGGCCGCACCACCAGCCCGGCGACCTGCCCTTCATGCGCGCTCCCGACCGTCACGTCTCCGTCATAAAGACTCCGCCAGACAACCAACGCTACCCCGCACCTGGAAATTCTAAATCTACTCCCAACAATAACGGACAACCCGCCGCCGGAGGCAAGGGTACGCGGCCGAAGCGCGGGAAATACCGCAACTACGATCGTGACAGTCTCGTGGAAGCCGTGAAAGCGGTTCAGCGAGGTGAAATGTCCGTGCATCGGGCCGGATCCTACTACGGCGTGCCGCACTCCACTCTGGAATACAAAGTAAAGGAGCGTCATCTTATGCGGCCAAGGAAACGCGAGCCGAAACCGCCTCAGGACACCAAGCCGCAGCCACCGAAGCCACCGCCACCGAAACCGCCGACGAAACCGTTCTCGAACGGCATGAACGGCCCGGACAATCCAGGCTACCCGGCCGGTTATCCTTTCTGGGGCGGTGGAGGGTTTGCACCACCGCCAACTCCCGACTTGTACGCGTCGCACATGATGCGACGACTACGAGAGGAGGCGCCTCCGCCGGCCAACGGATCGTTCCTGGAGGGGATTATAAGGTCGAGTTTGGAGCGGCCGGCTCTGATGCAGCGGCTGACGGGCGAGCCGCGCGTGGGGGGCGAGGCGACCCCGGGGCTGCTGCGGCGGCTGGCGGGCGAGGACGAGCCGCCGGCGCGGCGCCAGCGCCTCGACAGCTCGGACCAGGCGCTGGCGGCCGAGATGCGCGAGGCCGTGCAGCGGCTGCGGGCAGACAAGCTGCGGCCGCGCAACGGCACGCCGACGCCGCCGCCCGGCGCGCTCGGCCCGCTCGGCCCGCTCGGCCCGCCGCTGCCGGCCGGCTCGCCGGCCCCGGCCCCTCCCGCCGCCCCGCCGGACCGCGCCTAG
- Protein Sequence
- MRMDAKAIRFQQCNNVKGLERVAEELMGRRKWKLYQDALIPKRGEGERSSDEESVHTDPPPALKIKTIEQINEDDAKDERFDRTGGPERPERSDQVEDKPRRPETILESLIKRPATQPKVELSEEPSDWKPQDKCYFCTDGEPVPEARAGGATNPALLILFHLFLQSPASESDSSSVSGAKSPAAAPPLLQHLLQLQAQSPNTIAQFQQMIAALAALGSGLVPPPPLSQAWMMSRIVHRQQAERLPEVGDKVPASSSPNQTEQPLDLSNKSTSSTSGTPPPDAKVFDNRLKRTALEAGNSGSRRAYTEEELMSAVRDIQAGRLGTRRAALLYNIPRSTLRNKLNKFGANPETVDSEPDSDDRADSPPSVILKIPTFPPPDDKSPSPAGATMCPSIAPVTPVGPPPQQPLLLPHSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPGDLPFMRAPDRHVSVIKTPPDNQRYPAPGNSKSTPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPPPPKPPTKPFSNGMNGPDNPGYPAGYPFWGGGGFAPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALMQRLTGEPRVGGEATPGLLRRLAGEDEPPARRQRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPGALGPLGPLGPPLPAGSPAPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00821701;
- 90% Identity
- -
- 80% Identity
- -