Basic Information

Gene Symbol
Gata5
Assembly
GCA_905115235.1
Location
NC:55994986-56015963[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.032 73 2.7 0.5 4 28 335 357 333 366 0.74
2 2 7e-18 1.6e-14 52.8 6.9 1 35 390 423 390 424 0.97

Sequence Information

Coding Sequence
ATGAGAAAACGGATCAGTTTTGAGATGGAAAGTCAACAGTCGCAGTCACAGGCGCAACCACAGCAACAATCAGCCACACCAACAACAACCACCGCGGCGATAGCGAACGAGAAGTGTGAACTGAAAAGTGAGCAATTATCACCTGAGGAGAACCTCCAGGCCAGTCCGGCACCGGCCATCAATCATCATTCAGCCGCCACAAGAAGAATACTGACCACGGCGGGTACTTTGAGGGATATAAGTGAGCAGCAGGAGATCGACGAAGAATATCAGCAAACAGAGTTCGTGCAAATGGCTCCCAGGAATGAAGAAGGACATCAAACCTACACTACGTACGAAACCCTACCTCAGGGTGCTGTCATCGTCTGCGAGGAAAAAATCAAGACGGAAGATGATGAAAAAATTGGAGAACAGTCCGGAAGTACTGCAACTGTCTATCAAGAAGTTTCCACGCAAGGATCAGCTATTGAAGGACAGGAGCAGCAAACCACCACCTTACAGTATGCCGTGGATGCTTCCCAACACCAGCCTGTTCGATTTCGGTACGAGAATGCACCTCCACAGCAAATTGTCTTTTACGAAAACGAAGTACGAAATGACGCAGGTCCTGTAACGTCAATAAGTGCGGCTGAAACTAGTCAACCTGAACCGAAAACTTTCACGAACCTGGGCACTGTTCAAACGTTGCAGCCTACAGACCATATTCAGGCTATCGATGGATATTCCAATCACTCGAATTACTCTTTGGCTCCTAGTCAATTGTACAACAATACAAATGTGTTACTGTGCAAAAGTGACCCAACTTTGACGTCAGCTGTGCGTTCAAACGCTCACTTTGGAGGAACTGTATATGATGTTGGCGGAGAGAGTTATTGGTCTAATGGGAATATGGAGTATTCGACAACGAGTTACACTCATGCTATTTCCGATGAATATTCACCAAACACTACACAATGGACCACCTATGAGCCTCTCTCTGGAACTCCAAGTACTGAGTACCGATGTTCACAATGCACGTCAGTTTTGATGCGTCGTGAAAATGGCGAAATATTCTGCCCTAGCTGCACATCAGCTCTAAGGTTTCAATCACACGGTCCTCGTGTAGTGTCACGacagcaaaagtcaaaagctTCGGCTTCGTCTACCAGTCGTAGGAATGGGATCACATGTGCCAACTGCAAAACCTCATCGACTACCCTGTGGCGTCGGAATAACGAAGGTCAACCAGTGTGCAACGCCTGTGGATTGTACTTTAAACTTCATAATACGAATCGACCAATGAGCATGAAAAAGGAGGGAATACAGAAACGAAAGCGGAAACCAAAGAATAATGGCAGCAGCGGTATCAAGCCAACTATTTCGGGATATCCACCCAAACTGCTGCCACCCATCTACCCGTCACACTTACCAGCGCATACCGGCATTGTCCTAGCCAGTGGTCATGACATGCATGACATGGGAGTACATGGTGGAAATCACGTCGATATGGGCCAACCCCATCCTGACAGCCATGCAATAATCCTAACACGACATCCCACTGGTGTGGTAACAAGTGAAAGCGCTTCCCATCAGCAGGCTCAGCAGCAACATACCCATTCCAACCCTCAACAGAGTGAGTCCCCTCACTTGCCAACATCGAACGTATTGAGCCGGCACATCACACAATCGGTACCTCCAATCGACGCTGGCCGAGGTCAAAATGGCGAAATAACAAGCGTTATTACAAGTACAGGAATTACTGAACGATCATCTAACTCTTAA
Protein Sequence
MRKRISFEMESQQSQSQAQPQQQSATPTTTTAAIANEKCELKSEQLSPEENLQASPAPAINHHSAATRRILTTAGTLRDISEQQEIDEEYQQTEFVQMAPRNEEGHQTYTTYETLPQGAVIVCEEKIKTEDDEKIGEQSGSTATVYQEVSTQGSAIEGQEQQTTTLQYAVDASQHQPVRFRYENAPPQQIVFYENEVRNDAGPVTSISAAETSQPEPKTFTNLGTVQTLQPTDHIQAIDGYSNHSNYSLAPSQLYNNTNVLLCKSDPTLTSAVRSNAHFGGTVYDVGGESYWSNGNMEYSTTSYTHAISDEYSPNTTQWTTYEPLSGTPSTEYRCSQCTSVLMRRENGEIFCPSCTSALRFQSHGPRVVSRQQKSKASASSTSRRNGITCANCKTSSTTLWRRNNEGQPVCNACGLYFKLHNTNRPMSMKKEGIQKRKRKPKNNGSSGIKPTISGYPPKLLPPIYPSHLPAHTGIVLASGHDMHDMGVHGGNHVDMGQPHPDSHAIILTRHPTGVVTSESASHQQAQQQHTHSNPQQSESPHLPTSNVLSRHITQSVPPIDAGRGQNGEITSVITSTGITERSSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-