Hill007322.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- -
- Assembly
- GCA_905115235.1
- Location
- NC:7319604-7326846[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.17 9 6.6 0.1 3 23 63 84 62 84 0.96 2 19 1.3 70 3.8 2.7 5 23 173 191 170 191 0.91 3 19 0.7 38 4.6 1.2 3 23 361 381 359 381 0.86 4 19 0.13 7.2 6.9 0.7 2 23 543 564 542 565 0.93 5 19 0.55 30 5.0 1.4 2 23 581 602 580 602 0.96 6 19 0.0031 0.17 12.0 1.6 1 23 609 631 609 631 0.93 7 19 0.084 4.5 7.5 4.2 5 23 661 679 658 679 0.94 8 19 0.0038 0.21 11.7 0.1 2 20 696 714 695 715 0.94 9 19 0.85 46 4.4 1.8 2 23 734 755 733 755 0.93 10 19 3.5 1.9e+02 2.4 6.1 1 23 762 784 762 784 0.97 11 19 0.41 22 5.4 7.1 3 23 810 832 809 832 0.91 12 19 0.0035 0.19 11.8 1.5 3 23 851 872 849 872 0.95 13 19 0.39 21 5.4 3.2 2 23 888 909 887 909 0.95 14 19 0.0039 0.21 11.7 3.2 1 23 916 938 916 938 0.97 15 19 0.076 4.1 7.7 5.0 4 23 963 984 961 984 0.89 16 19 0.00037 0.02 14.9 0.6 1 20 1005 1024 1005 1028 0.95 17 19 1.1 62 4.0 2.9 2 23 1044 1065 1043 1065 0.94 18 19 0.0023 0.12 12.4 1.9 1 23 1072 1094 1072 1094 0.96 19 19 0.055 3 8.1 0.5 1 23 1100 1123 1100 1123 0.96
Sequence Information
- Coding Sequence
- ATGGATTTGATGTCCTTGCTGAATTCGAAGCCTCATTTAGACCTCCAATCAGGAGGCGGAATTCTAAGGGGATTACTAGAACAAAACCGTGTTCCGAGTGGTTGTACAGACAGTCTCGACAGCATCGATCAAAAGACAAAATATGGTCGCGTCTTGATATTAGCTAATGGGGAATATACCGTTGCATGTAATGCTTGCAATGGTCGTTTCGATACTGTGGAATCTTTGAGCGATCATTTGAAGACTGTTCATTGGGACTACTATGTGCGGAGAGATGGCTGGATTAAAACTACTAACAGGAAGGAGCCAATTGGCAAGAGGTTCAACGTTAAATATCAAGAATGCATCCCAGCAGATATCTCTGCCCACGGGGCATCAGATCACCCATTGTCCAAGGAATCTTTTACCAATGTTCGGCAAAATGTTGTCACTAAGGCGAATCGCAAAGTTAATAAAAAACCAACTGTGGTAGTTACGGCCGAACCGAAATATGACGAAAAGAGACTGTTTTGCATCACTTGCGATCGCCAGCTGACCTCGAGAAGAAACTTTACGCGTCATAAATATTATCACAAGGAATGTTTCCGTAAACATGGGGCCCATTTGACTTGCGATATTCAAGAAGATGTGTCGACCGGAATTGCAATAAAGGATGAATTAGATTTTGGTGACTACGAAATTCAGGATTCAGCTTACAATGAAGGAAGCGTTGAAACCAGCGATAATGATGACAATACTGAACGGGGGCAAACGGATTCAAATGATTCCCTCAATCCACTTTCTCGGAATCATGAAAATTTATCAAAGAATTCTTGCAGCGCCGATGTGATGAGGGAACCGACTGGTACGACGAATGTTAAGTTAGAAGCTGTTGATCCAGATGAGGAAATGGAACTTCGTGAAGACAGTATTCCAACAAATAGATTCCCACCGAAAGGCATTTTTAACTCCCATGAACTACGGGACAACAGGAAGATACGTGTGAATTATTCGGCTATTGACAAACTAAGATTTTCACCGGAGAAAGAAGTAAAATTCGTGTTTTCTGAAAATCCTAAATTCGATGATGAAAACCACTTTTGTATCACATGCAATCGTGGCTTTGCCTCCAGAGGTAGCTTAGGACGTCACAAAGGATTACATACAAAGCAAATTATCGAAAGACAAGGGAATCTGTCGAAAGACACAATTCGTTGCAACGATGACGATGTGGAACATGTGAAAGGAGATGCGAATAGTTCGCTGGATTCACATTATTTTTCTGATAACTCTTCGCAGTCGAGCTATGAGAAGACGCAAAGCCAAACCTCTACAATAACTGATACCCAAAAGGGAGAAGAACTGACGGGTGGACGAACTGTTCGAGTAGAACTCACTTCCCCAGACCGATCTAATGAAAGCAATGGACAATATCGGACGAAAGACGCTGATCAAAAGCTGAAACCGAATTCCGGTAAACCGATCGTTTTTACGTTGGAGCCTCAATTCAACGAGGAAAACAAATTTTGTATAACTTGCAATCTTCAGCTGGATTCGAAGAAAGCTTTCAAAGTGCACAAACACGGTCATAATGCTAAAATCCGGATTTGGAAAATCGCTAATGGCAttctcccgaaagccgcaaTTTCTTGCGAACTTTGCTCTAATCTATTTAGATCAGAAGCTGGTTTGAGAAAACACGTTGTGAAACATCATGGAGATGAAATTCCGCCATCCCTCAGAGACGATCCAACTTACCTTCAATGTCGATTTTGTTTTAAAGAATTTGAAAAACCAACAGAACGTTATGAACATGAGAGAAGTCACGGTAGAGACGAAAAGCGGTACCAATGCTCACAATGTCCGAAATCTTTCGTAAATCGCTTCAAACGCACAATTCACGAATCACTCCATCGAGAAAACAGATGGAAACCTAAGGTACAAGTAAAAATGGTGTTTTCTGAAAGTCCCAAATTCGACGACAAGAAGGGCATCTGTATAACATGCAATCATAAATTTACCTCTAGACAGAACTATAATGTTCACAAACGTAGACATAGAATAATAATTCGCGAAAAACAAGGCATTGTGCAGAAAATCGCGACATATTGCGAGCTTTGTTCTAGAGAATTCAAAACAGAAGACGGCCTACGCCGACACGTAGTACCAAATCACGGCGATAAGATCCCAATGTTCCTTAAAAACGATCCAacctaccttcaatgtaagttTTGTTTTAAAGAATTTGAAAAACCAACAGAACGTTACCTACATGAGAAAAATCATCCCAAAGTAGAGATGCCATACCAATGTCGATTGTGCCCACAATTGTTCAGGAAGCTGTGCAATCGCAAACATCATGAACTAAGTCATAAAGCGGACGAAAAGCAGCCAGGGGAGCAACCAAGCTTCGTTTTTTCAGAGAATCCCAAGTTCGATGACGAGAAATGCTTTTGCATAACATGCAATCGTCAGTTTGTTTCTAGAGCAAGACTTCATCGTCACAAGCGAACACATAAAATGAAGATTCGTCTAAAACAGGACACTCTGCCGCCTAAAGTTATAACTGATTGCGAATTTTGCAGTAGACATTATAAAACAGAGGATGGTTTGCGGCGGCACCTCGTAACGGATCACGGAGACAACATTCCGTCTTCCTTCAGGGACGATCCAACCTACCTTCAAtgcaaattttgttttaaagagTTTGAAAAACCAACAGACCGCCACCGACACGAGGAAAGCCACCCCAGAAAAGAAAGATCTTATAAATGCCCACACTGCCCGCAGTTTTTCATGACGCTCTACAACCGCAAAACTCACGAAGTAACTCATAAAGGAGGCGGACGAAAGCCAGCGGAGAAAATCGTTTATTCTGACAATCCTGAATTCGATGGTAAAAACTGCTTTTGTATAACATGCAATCGCGAATTTACCTCTAAAATCAGTTTTAACAATCACAAAAGAAAGCATCGAATTGAGATTGGTATCAGGCAAGGCACTCTACCGAAAGCCACTCTACCAAAAGCCTTATTTCGTTGTGAATTTTGTTCTAAAACATTCAAGTCAAACATCGGCTTGAGAGAGCATATTCTGCCTAATCACGGGGATGCTATCCCAACATTCCTCAAAGACGACCCAACGTACCTTATGTGTCGGTTTTGTCACAAGCAATTCGAAAAACCCACAGAGAGATACAGCCATGAAAAAATTcacgaaaatgaagaaaaaccgTTTAAATGCTCAACGTGTTCGAGGGTTTTCAGCAGGAACACGGAACGCAAGGAACATGAAACCGTTCATTCACAAGATCGTCCATTTCCCTGTCCACACTGTCTTTATTCTGCTAAAATACGGGCAAGACTTAATCGACATATCCTAAGAGTTCATTCTGGTAAAAAATCAACTCGATGTAAAATTCCCGGAAACTCCGAATCCCATGAACTAAGAACCAACTCTGAGGAAGAGCAATTCGAAACTAATACATCTATTGGGGTCAATGGAGAACTTTCTAGTCAATTAAACACGACAAGGAAGGCTGCCTCTGTTCAGTTAGAAGAAGCCACTAATGATAAAACATCCTTTTCCGAAGACAtttctaataataaatattttgtttaa
- Protein Sequence
- MDLMSLLNSKPHLDLQSGGGILRGLLEQNRVPSGCTDSLDSIDQKTKYGRVLILANGEYTVACNACNGRFDTVESLSDHLKTVHWDYYVRRDGWIKTTNRKEPIGKRFNVKYQECIPADISAHGASDHPLSKESFTNVRQNVVTKANRKVNKKPTVVVTAEPKYDEKRLFCITCDRQLTSRRNFTRHKYYHKECFRKHGAHLTCDIQEDVSTGIAIKDELDFGDYEIQDSAYNEGSVETSDNDDNTERGQTDSNDSLNPLSRNHENLSKNSCSADVMREPTGTTNVKLEAVDPDEEMELREDSIPTNRFPPKGIFNSHELRDNRKIRVNYSAIDKLRFSPEKEVKFVFSENPKFDDENHFCITCNRGFASRGSLGRHKGLHTKQIIERQGNLSKDTIRCNDDDVEHVKGDANSSLDSHYFSDNSSQSSYEKTQSQTSTITDTQKGEELTGGRTVRVELTSPDRSNESNGQYRTKDADQKLKPNSGKPIVFTLEPQFNEENKFCITCNLQLDSKKAFKVHKHGHNAKIRIWKIANGILPKAAISCELCSNLFRSEAGLRKHVVKHHGDEIPPSLRDDPTYLQCRFCFKEFEKPTERYEHERSHGRDEKRYQCSQCPKSFVNRFKRTIHESLHRENRWKPKVQVKMVFSESPKFDDKKGICITCNHKFTSRQNYNVHKRRHRIIIREKQGIVQKIATYCELCSREFKTEDGLRRHVVPNHGDKIPMFLKNDPTYLQCKFCFKEFEKPTERYLHEKNHPKVEMPYQCRLCPQLFRKLCNRKHHELSHKADEKQPGEQPSFVFSENPKFDDEKCFCITCNRQFVSRARLHRHKRTHKMKIRLKQDTLPPKVITDCEFCSRHYKTEDGLRRHLVTDHGDNIPSSFRDDPTYLQCKFCFKEFEKPTDRHRHEESHPRKERSYKCPHCPQFFMTLYNRKTHEVTHKGGGRKPAEKIVYSDNPEFDGKNCFCITCNREFTSKISFNNHKRKHRIEIGIRQGTLPKATLPKALFRCEFCSKTFKSNIGLREHILPNHGDAIPTFLKDDPTYLMCRFCHKQFEKPTERYSHEKIHENEEKPFKCSTCSRVFSRNTERKEHETVHSQDRPFPCPHCLYSAKIRARLNRHILRVHSGKKSTRCKIPGNSESHELRTNSEEEQFETNTSIGVNGELSSQLNTTRKAASVQLEEATNDKTSFSEDISNNKYFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -