Hill007536.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- -
- Assembly
- GCA_905115235.1
- Location
- NC:7305303-7315202[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 9.8 5.4e+02 1.0 0.2 2 23 61 83 60 83 0.89 2 22 9.4 5.1e+02 1.1 2.4 5 23 184 202 181 202 0.91 3 22 0.97 53 4.2 2.7 5 23 377 395 374 395 0.90 4 22 0.079 4.3 7.6 1.5 1 23 406 429 406 429 0.89 5 22 2.7 1.5e+02 2.8 3.1 1 23 473 495 473 495 0.95 6 22 0.18 9.9 6.5 2.2 5 23 525 543 522 543 0.92 7 22 4 2.2e+02 2.2 0.3 2 23 688 709 687 710 0.92 8 22 0.49 26 5.1 3.5 2 23 726 747 725 747 0.96 9 22 0.00014 0.0074 16.3 1.1 1 23 754 776 754 776 0.95 10 22 0.0059 0.32 11.1 5.3 3 23 802 824 801 824 0.91 11 22 0.0022 0.12 12.5 2.1 2 23 841 862 840 863 0.93 12 22 0.37 20 5.5 2.9 2 23 879 900 878 900 0.96 13 22 0.026 1.4 9.1 2.5 1 23 907 929 907 929 0.98 14 22 0.023 1.3 9.3 4.6 2 23 954 977 953 977 0.91 15 22 0.0016 0.087 12.9 2.4 2 23 995 1016 994 1017 0.94 16 22 0.73 40 4.6 3.8 2 23 1033 1054 1032 1054 0.95 17 22 0.0002 0.011 15.8 1.3 1 23 1061 1083 1061 1083 0.97 18 22 0.28 15 5.9 1.6 5 23 1113 1131 1110 1131 0.94 19 22 0.04 2.2 8.5 1.7 1 23 1147 1169 1147 1170 0.94 20 22 0.8 44 4.4 3.8 2 23 1186 1207 1185 1207 0.95 21 22 0.0036 0.19 11.8 1.7 1 23 1214 1236 1214 1236 0.96 22 22 0.00015 0.0084 16.1 0.7 1 23 1242 1265 1242 1265 0.98
Sequence Information
- Coding Sequence
- ATGGATTTAATATCCTTGCTAAATTCAGGACAACATATAGAGCTTAAATCAGAGGAAGAGATTCTCAATGAGCTCCGAGAAGATCACCACATTGACGATAATCATCCAGGTTCCTCGAGCCTTCAGCAAAAGGCGAAGTGTGGCCGTGTCCTGATATCAACTGGTGGAATATATAGCATAGTGTGCGATGCTTGCAATGACTACTTCGATGGAATGGATTCATTTAGCAATCATTTGAAGACTTTCCATTCGGACTATGGCATACGAAAAGATGGCTGGATTAAGGTTGCTATTACCGAGGAGCCAACTTTTAAAACTGAGGAAATCGATGATCAAGAATGCCTCGCAGCTAGCATCTCTGTCTGCAGAATTCCAGAATACTCAATGTCTAAGAAATCTGCAGACGATGTTCCGAAAAATACTGTCACTAGGAAGGATCCGGGAAAGGTGGCACAACAGGGTTCCAGCGGAAGCTCGAAAATTCCAAGAAAACCAACTGGAATAATTACCGACGAACCAATATATGACGGAAAAAGGTTATTTTGTATCACATGCGACCGTCAGTTAAATTCGAAGAAGAGTTTCTTGCGGCATAAATACTATCATAAGGAGCGGATCTGCGAACAAGGAATGGCAATTTCAGATCGCGACAGTCAGGAAGATGTTTCGGCTGAAGCCATAGTAAAGACTGAATTAGATTTTGGTGACTACGAAATTCAGAATCCAGCTCTGCCAACAGTGTACAATGAAGGAAGCATTGAAATCAGCGACACCGATGACAATACGGAGCCAGGACATGCAGATTCAAATGATTCGCCAGATCTACATTTTCAGAGTCAAGGCAGTTTGTCAGAGAATATTTTCGGTAAAATTCAAAACAAGACTAACTCAACATACAGAACCAATTTGACACAGGGGCAGACTAGTGCAAAAGAAAGGACATTAAACGCAACTTTTTCTAGAAGCGGAGACAATTTTAACCGAAAGATTGAACTTATTAAATCTGACATGAATCCTTCAAGGGCATCAGTTCAGTTGGGAGGTGCTacgaaaaatgagaaaatgagacGAATTAAAACGGTCTTTTCCAAAACACCTACTTTCGATGATAAGAAAAACTTTTGCATCACCTGCAACCGTAAATTTGCCTCAAGGCGCAGTTTCAATTCGCATAAATATTTGCATAGAAGACTAattcgtgtaaaacaaatccgATTTTGCTGCGAATTTTGCCCCAAAAGATTTAAATTAGATTTTGGCTTAAGAGAGCACATTGTGGCCAATCACGGAGATGAGATTCCAAAGTTCCTACAAGACAATCCAACAAACCTTGAATGtcgtttttgttttaaacaatttGAAGAACTAACGCAACGTTACCAACACGAACAAAGTCACGGTGGAGAAAAGAGGCCATATCGATGCTCGTTATGCGTGAATTCGTTCTCGAATCACTTGAAGCGTAAAATTCACAAATTAATTCATAGAAAAGATGGCTGGAACCCAAAAAAGCAAGTAAGATTCATGTTTTCTGAGAATCCGAAATTCAATGATAAGAAACGCTTTTGCATAACATGCAATTGTGGATTTGCTACGAAAAGCAGTCTAGATAGGCACAAACAAGAGCATAGAATGAGGATTCGTAAAGGACAAGGCATTGTTCCGAAAGCCAGAGCTCTTTGCGCCAGTGAAGATGCGGAAGAAATGAAATTACATTCGAATAATTCAATGGATTCCTATTGtttttctgaggattcttcaCAGACAAGCTGCGGGGAGATGCAAAGCAAAATCGCTGCAATAGCTGATACTCATATTAAAGATGAAATGGCTTCTCCAGATGAGTACACCTCATCTTCCGACGAGAGCGATGAACAATATGCTTACATGGCCTCAATCGTCTTCACATTGGAGCCGGAATTTAACgaagaaaaaatgttttgtATCACCTGCAATTGTCAACTGGATTCCAAGGAAGCTTTTAGGGCTCATAAAGAAGGACATAAAGCAAAAATTCGAAAGTGGAAAGTCAACCAAGGAATGCTTCCGAAAGCTacaatttcgtgtgaattttgCCCAGATCAATTCGGATCAGAACTTGGTTTAAGAAAACACGCTGCAAGGCACCACGGAGATATGATTCCTACACATTTCAAGGACGATCCAACGTATCTTAAGTGCCGGTTCTGCCACAAGCAATTTGAGAAACCAACAGAGCGTTACGCGCACGAGAAAAGCCACGCTGGGGAAGAGAAGCAGTATAAGTGTCCCTTGTGTCCCAAATCTTTCAAGGACCAATTCCAACGCAGAATCCACGAATCACTTCATAGAAAGAACGGTTGGAAACCGAATGAACACGTAAGAATGGTGTTTTCTGAAAATCCCCAATTTGATGATGAGAAATGCTTTTGTATAACATGCAACCGTCAATTTGGCTCCAAGGATAGTCTTCGTCGTCACAAGCGAACACATCTAATAAAGATTCATTTGAAACAAGGCATTCGGGCAAAAGTCGCAACCTATTGCGAATTTTGCACGCGACAATTTAAATCAGAAAGTGGTTTGCGACAGCATCTCCTAGCGCATCACGGAGATAAGATCCCGTCATCCCTCAAGGACGATCCAACGTACCTTCAATGTAAGTTTTGTTTTAAGCAATTCGACAAACCAACAGAACGTTATCGACACGAGAAAAACCATCCTAAAGTGGAAATGCCATATCAATGTCCACTATGCCCACAATTGTTCACGACCCTGTGCAATCGCAAATATCATGAATTAACTCATAAAGGGGACGGAGAGCAACCAAAGGAGCAAACAAGCTTCGTTTTTTCAGAGAATCCCAAGTTCGATGACAAGAAATGCTTTTGCATAACATGCAATCGTAAGTTTGTCTCTAAAGAAAGTCTTTATCGACACAAGCGCGCACATAAAATGAAGATTCGTTTAAAACAGGACACTGAGCCGCCGAAAGTTACAACTTATTGTGAATTTTGCAGCAGATATTTTAAATCAGAAGACGGTTTGCGGCGGCATCTCGTAACGCATCACGGAGACAAGATTCCGTCGTCCTTCAAGGACGATCCAACTTATCTTCAAtgcaaattttgttttaaacagtTTGATAAACCAACAGACCGTCACCGACACGAGGAAAGCCACCCTAGAAAAGAGAGACCCTATAAATGCCCACAATGCCCGCAGTTTTTCACGACCCTCTCCAACCGCAAATCTCATGAAGTAACTCATAAAGGAGACGGGCGAAAGCCAGCGCAGCCAATAAGCATTGTTTATTCTGAAAATCCTGAATTCGATGATGAAAAAATCTTTTGTATAACATGCAATCGCGGATTTGCCTCTAAAGTCAGTTTTTACAATCACAAACAAAAGCATCGAATTGGGATTCGTAAAAAACAAGGCATTCTACCGAAAGCctcatttcgttgtgaattGTGTTCTAAAAAATTTATGTCAGATCTTGGTTTGAGACAGCATATTGTCCAGCATCATGGCGACACGATCCCAGCGTCCTTCAAAGACGATCCAACATACCTTAAGTGTCGGTTTTGTCACAAGCAATTTGAAAAACCAACAGACAGATACAGCCATGAAAAAATTCACGCAAACGAAGAGAAACCGTATAAATGCTCAACGTGTTCAAAGGTTTTCGGAAGGAGCACGGAACGCAAGACTCATGAAACAGTTCATTCCAAAGCTCGTCCATTTCGATGTACTCAATGTCCTAATTCTTATAAAATACTGTCTAGTCTTAATCGACATATTCAAACTGTCCATTCTGATTAA
- Protein Sequence
- MDLISLLNSGQHIELKSEEEILNELREDHHIDDNHPGSSSLQQKAKCGRVLISTGGIYSIVCDACNDYFDGMDSFSNHLKTFHSDYGIRKDGWIKVAITEEPTFKTEEIDDQECLAASISVCRIPEYSMSKKSADDVPKNTVTRKDPGKVAQQGSSGSSKIPRKPTGIITDEPIYDGKRLFCITCDRQLNSKKSFLRHKYYHKERICEQGMAISDRDSQEDVSAEAIVKTELDFGDYEIQNPALPTVYNEGSIEISDTDDNTEPGHADSNDSPDLHFQSQGSLSENIFGKIQNKTNSTYRTNLTQGQTSAKERTLNATFSRSGDNFNRKIELIKSDMNPSRASVQLGGATKNEKMRRIKTVFSKTPTFDDKKNFCITCNRKFASRRSFNSHKYLHRRLIRVKQIRFCCEFCPKRFKLDFGLREHIVANHGDEIPKFLQDNPTNLECRFCFKQFEELTQRYQHEQSHGGEKRPYRCSLCVNSFSNHLKRKIHKLIHRKDGWNPKKQVRFMFSENPKFNDKKRFCITCNCGFATKSSLDRHKQEHRMRIRKGQGIVPKARALCASEDAEEMKLHSNNSMDSYCFSEDSSQTSCGEMQSKIAAIADTHIKDEMASPDEYTSSSDESDEQYAYMASIVFTLEPEFNEEKMFCITCNCQLDSKEAFRAHKEGHKAKIRKWKVNQGMLPKATISCEFCPDQFGSELGLRKHAARHHGDMIPTHFKDDPTYLKCRFCHKQFEKPTERYAHEKSHAGEEKQYKCPLCPKSFKDQFQRRIHESLHRKNGWKPNEHVRMVFSENPQFDDEKCFCITCNRQFGSKDSLRRHKRTHLIKIHLKQGIRAKVATYCEFCTRQFKSESGLRQHLLAHHGDKIPSSLKDDPTYLQCKFCFKQFDKPTERYRHEKNHPKVEMPYQCPLCPQLFTTLCNRKYHELTHKGDGEQPKEQTSFVFSENPKFDDKKCFCITCNRKFVSKESLYRHKRAHKMKIRLKQDTEPPKVTTYCEFCSRYFKSEDGLRRHLVTHHGDKIPSSFKDDPTYLQCKFCFKQFDKPTDRHRHEESHPRKERPYKCPQCPQFFTTLSNRKSHEVTHKGDGRKPAQPISIVYSENPEFDDEKIFCITCNRGFASKVSFYNHKQKHRIGIRKKQGILPKASFRCELCSKKFMSDLGLRQHIVQHHGDTIPASFKDDPTYLKCRFCHKQFEKPTDRYSHEKIHANEEKPYKCSTCSKVFGRSTERKTHETVHSKARPFRCTQCPNSYKILSSLNRHIQTVHSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -