Hill008775.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- -
- Assembly
- GCA_905115235.1
- Location
- NC:7336117-7351340[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.41 22 5.3 0.2 2 23 61 83 60 83 0.95 2 25 0.0047 0.25 11.5 1.9 1 23 350 372 350 373 0.94 3 25 3.7e-06 0.0002 21.2 1.0 1 23 433 455 433 455 0.97 4 25 0.0033 0.18 12.0 1.1 1 23 461 484 461 484 0.94 5 25 0.0085 0.46 10.6 3.0 1 21 490 510 490 511 0.96 6 25 6.8e-07 3.7e-05 23.5 2.6 1 23 529 551 529 551 0.97 7 25 0.00028 0.015 15.3 0.2 1 23 583 605 583 605 0.98 8 25 4.9 2.7e+02 2.0 3.2 5 23 699 717 696 717 0.94 9 25 0.07 3.8 7.8 2.4 3 23 754 774 753 774 0.95 10 25 0.18 9.7 6.5 1.6 1 23 785 807 785 808 0.91 11 25 0.0028 0.15 12.2 1.4 1 23 852 874 852 874 0.97 12 25 2.3 1.3e+02 3.0 2.7 3 23 902 922 900 922 0.86 13 25 1.7 90 3.4 1.5 5 23 1034 1052 1031 1052 0.89 14 25 9.5 5.2e+02 1.1 3.4 2 23 1072 1093 1071 1094 0.89 15 25 1.7 93 3.4 1.5 2 23 1110 1131 1109 1131 0.95 16 25 0.012 0.64 10.2 2.4 1 23 1138 1160 1138 1160 0.93 17 25 1.5 81 3.6 5.8 5 23 1190 1208 1188 1208 0.95 18 25 0.011 0.61 10.3 0.2 2 20 1225 1243 1224 1244 0.95 19 25 0.59 32 4.8 2.5 2 23 1263 1284 1262 1284 0.96 20 25 0.00044 0.024 14.7 1.6 1 23 1291 1313 1291 1313 0.96 21 25 0.051 2.8 8.2 2.1 5 23 1343 1361 1340 1361 0.93 22 25 0.04 2.2 8.5 0.1 2 20 1378 1396 1377 1399 0.94 23 25 8.8 4.8e+02 1.2 5.1 2 23 1416 1437 1415 1437 0.96 24 25 0.036 2 8.7 0.7 1 23 1444 1466 1444 1466 0.93 25 25 0.0038 0.2 11.8 2.5 1 23 1472 1495 1472 1495 0.97
Sequence Information
- Coding Sequence
- ATGGATTTGATGTCTTCGTGCAATTCGAGGCTGCATTTAGGCATAAAATCAGAGGACGAGATTCTAAGTGAACTCATAGAAGGAAACCATGTTTCGAGTCATTATACAGATACTATGAGCAACGATCAGATGGCAAACTGTGGTCACATCTTGATATCAATTAGTGGGGAATATACCGTAGTATGTGATGCTTGTAAAGGACGTTTCGATACTGTGGAATCATTCAGCAATCATTTGAAGACTGTTCATTGGGACTATGCAGTGCGGAGAGATGGTTTGGCTAAAACTACTAACAGGAAGGAACCCATTGTCAAAAGGAATAACGTTAAATATCAAGAATGCATCCCAGGAGATATCTCTGCCCGCAGGACATCAGAACCCCCAGAGTCCAAGGAATCTATTACCAATGTTCGGCAAAATTTTATCACTAAGGTGAATCCGGGAAAGGTGACCCTTCAACATCCTGACCACTACTCGAAATCTGGTAGAAAACCAACTTTGGTAATTACGGCTGAACCGAAATATGATGAAAGGAGACTATTTTGCATCACTTGCGATCGTCAGCTAACTTCGAGAAAACACTTTTCACGTCATAAATATTATCACAAGCAACGTTTTCGTAGACAGGGGACCCATTCGATTGATTGCGATAATCACGAAGATATGACGATCCAAGTTCCAGTAAAGGATGAATTAGATGTTGGTGACTACGAAATTCAGGATTCAGCTTACAATGAAGGAAGAATTGAAACCAGCGATAATGATGACAATGCTCAACGGGGGCAAACGGATTCAAATGACACGCTTAAACCACACTTTCGGAATCATGGCGTTTTATCAGAGAATGCCTACAGTGTCGATATGATGAAGGGGTCGACTGGTGCGACGGCTGTTAAGTTAGAAGTTGTTAATCCAGATGAGGAAATGGCACTTAGTGGAGAGGGTATTCCACGAAGTGGTTTTCCATCGCAGGGAAATGTTACCTCCCATGAGCTTCTGGAGAACAGAAAGATACCCGTGAAACGTTCGGATATTAACAAACTCAGATTTTCTTGTAAATTATGCTCGGAAAGGTTCAAATCTGAATTTGAGCTCAGAGATCACGCTGTAATGCACCACGGAGATGATATGCCAAAGTCCTTTCGAGACGATCAAACACCCCATGAACCCCAATTGTGTCAGGAGCAATTTCAAAAACCAACAGACCTTCATGCACATGAGGGAAATAACTCTAATGAGGGAACTCACAAATGTTCTAAACGTCCTGTTCCGACTTCTCTTTCCCAGGGAAACTCATTCGCTTGTGCTGATTGCGGCAAACTCTTTAGTAAAAAATCAGAGCTAACATCGCATAGGAAAACCCACGTTATTAAAACTGATCACAAATGTGAAAAATGCGGGGAATTATTCACTGAAAGGTTGGGATTACGGCGCCATATCTTGGATAAACATTCTGAAGCGTGTGATTTTCAGTGCAGGAACTGCGAAAAACGATTCAAATCGTATTTCTTTTTAATGACTCACATAAAATACACCTCCTGTGGTGAGAAAGTCGGGCAGGAGAACGGTTTCCATTCGGAAATGCATAAGTGTGAAAAATGTGGGAAAGTATTCAACACAAAGACTGATTTGGAAAAGCATATGACCGAGCATTCCATTGATTGTCTTGTCCAATGTTCAGCCTCTGGAGATCAATCTGGAAAGAGGTCGTCAATTTTCCCTGAGGAATTAGGAGACGAAGAAACGTATAGTTGTATGGTTTGTGATGTAAAATTTATTCAAGACAGTGACTTGCAATTGCATATCAAATCTCATAAACTAGAGAGCAGCTACGAGACGGTGCAACTCAAAAAGGATATATCGGAGGACCCCGATATGCAGCCTTCTAAGTGCCTAGACGCTACAAGTGTCGCTTCTGATCACTTGGGAGACACTTCCAAAAGTGAAGAAGCGCCTGCCTGCGAAGATAGCAGTCTGCAAAGTGGGGCAGCGCCTCCATGCGAAGATAGCAGTCTGCAGGGGACATGCCAACCAAAGAAAACGATCGTATTTACATTGGAACCCGAATACGAcgaagaaaataatttttgtatCACTTGCAATCAACGGCTGAGTTCGAAGGAAACATTCAGATACCACAAAAAGAAGCATAGATCGCATATCCGGTATTGGAAATTGCGCAAAGGGTTGAAATTAGATAACAGACGAACTAGAACGGTGTTTTCTAAAAATCCTATTTTTGACAATAAGAAAAACTTTTGTGTGACCTGTAATCGTAAATTTGCATCAAAGCCCAGCTTCAGAAGCCACAAATCCCAACATAGAAGATTGATTCGCGAAAAAACCCTTAAATTTTGTTGCGAATTGTGCCCCAGAAGGTTCGGAACCGACTTTGGCTTAAGAGAACATGTCGTGGCACATCACGGAGACGAGATTCCAAAGTTCCTACAAGACGATCCAACGTACCTTGAATGTCGATTTTGTTTTAGAGAATTTGAAGAACCAACGCAATGTTATCAACACGAGCAAAGTCACGCTGGAGAAAAAAAGCCATATCAGTGCCCATTATGTCCTGAAACTTTCACCACTCACCTTCAGCGGAAAATTCATAAATTAATTCATAGAAAAAGCGGATGGAAACCGAAGGAAGAAGTAAAATTTGTGTTTTCTGAAAATCCTAAATTCGATGATGTAAACCACTTTTGTATTACATGCCATCGTGGCTTTGCCTCCAGAGGTAGCTTAGGACGTCACAAAGGATTACATACAAAGCAAATTATCGAAAGACAAGGGAATCTGTCGAAAGATACAATTCGTtgcaatgatgatgatgtggaagATGTGAAAGGAGATGCGAATAATTCGCTCGATTCACATTATTTTTCTGATAATTCTTCGCAGACGAGCTACGAGAAAATACAAAGAAAATCCACTATAACAACTGATACCGATAAGGCAGAAGAAGTGGCGAATGGATCATTTGTTCGAATAGAACCCACTTCCCCGGAGGACCCTGATCAAACGCTGAAACCAAATTACAGTGGCTCAATCGTTTTTAAATTGGAGCCGCATTTCGACGAGGAAAACAAATTTTGTATAACGTGCAATCGTCAATTCGATTCGAACAAAGCTTTCAGAACCCACAAAGACGGCCATAAAGCGAAAATTCGGAAGTGGAAAATCACCAATGGCATTCTGCCAAAAACTACAATTTCTTGTGAGTTTTGCTGTAGTCAATTTAGATCAGAAGATGGTTTAAGAAAACACGTTGTAAAACATCACGGAGATAAAATTCCGACATCCCTCAGAGACGATCCCACTTACCTTCAATGCCGATTTTGTTTTAAAGAATTTGAAAAACCAACAGAACGTTATGAACATGAGAAAAGTCACGCTAGAGAGGAAAAGCGGTACCAATGCCCATTCTGCCCAAAGTCCTTCATAGATCACTTCAAACGCAAAATCCACGAATCACTCCATCGAGAAAACAGATGGAAACCTAAGGTACAAGTAAGAATGGTGTTTTCTGAAAGTCCGAAATTCGACGACAAGAAGCGCCTCTGCATAACGTGCAATCATGAATTTATCTCTAAACATAGCTTTAATGTTCACAAACGAAGACACAGAATGAAAATCCGCGAAAAACAAGGCATGCTGCAGAAAGTCACGACATATTGCGAGCTTTGTTCTAGAGAATTTAAGTCAGAAAACGGTCTCCGGCGACACTTGGTCCCGAATCACGGCGATAAGATTCCAACGTTCCTCAAAAACGATCCAACCTATCTTcaatgtaaattttgttttaaacaatttgaaaaacCAACAGAACGCTACCAACACGAGAAAAGTCACCCAAGAGAAGAAAGACCGTATAAATGCTCGTTATGCCCGCAGTCTTTCACGACCCTGTCCAATCGCAAAACCCATGAATCCTTACATAGAGAGGCCATCCGGAAACCGAAGGAACGACGAAATTTTGTATTCTCGGAAAATCCAAAAATCGACGATAAAAAACGATTTTGTATAACATGCAATAGTGGATTTACCTCCAAAAGTAGCCTTAACAATCACAAACAAAAACATCGAATGAGGATCCGTGAGAAACAAGGCAATCTTCCTAACTCCACAGTTCGTTGCGAATTCTGTCCCAGACAATTTAGATCAGAAATTGGTTTAAGAGAGCATATTGTACCGCATCATGGAGATAAGATCCCATCTTCCCTCAAAGACGATCCATCGTACCTTCAATGCCGGTTTTGTCATAGCCGATTCGACAGACCAACGGAGAGGCACCAACATGAGAAAATTCATGCAAACGAACAGAAGCCGTATCAATGCTCGACATGTTCGAAGTCCTTCGGGACGGGCACGGAACGCAAGACCCACGAAGCCATTCATAAAGAAGATCGTCCATTTCGCTGTTCACAATGCTCTTGCTCTTATAAGATAGCGTCGAGCCTTAGTCGTCACGTTCGAAATGCCCATTCCGGCATTAAGCCAATTATATACGGAACTTTTGGAGAACCGGATGATTCGAAATCAAACCTGACATCCCACAAATTGACTAATACAAAAGATAAAGATTGCGAATTGCAATCGGATAAGCAACCCCTTGAACTAAGGACTAATTGCGAGAAAATGCAATTGGAAACCGATGGAGTTGCTTCTGTTGTTCAATGA
- Protein Sequence
- MDLMSSCNSRLHLGIKSEDEILSELIEGNHVSSHYTDTMSNDQMANCGHILISISGEYTVVCDACKGRFDTVESFSNHLKTVHWDYAVRRDGLAKTTNRKEPIVKRNNVKYQECIPGDISARRTSEPPESKESITNVRQNFITKVNPGKVTLQHPDHYSKSGRKPTLVITAEPKYDERRLFCITCDRQLTSRKHFSRHKYYHKQRFRRQGTHSIDCDNHEDMTIQVPVKDELDVGDYEIQDSAYNEGRIETSDNDDNAQRGQTDSNDTLKPHFRNHGVLSENAYSVDMMKGSTGATAVKLEVVNPDEEMALSGEGIPRSGFPSQGNVTSHELLENRKIPVKRSDINKLRFSCKLCSERFKSEFELRDHAVMHHGDDMPKSFRDDQTPHEPQLCQEQFQKPTDLHAHEGNNSNEGTHKCSKRPVPTSLSQGNSFACADCGKLFSKKSELTSHRKTHVIKTDHKCEKCGELFTERLGLRRHILDKHSEACDFQCRNCEKRFKSYFFLMTHIKYTSCGEKVGQENGFHSEMHKCEKCGKVFNTKTDLEKHMTEHSIDCLVQCSASGDQSGKRSSIFPEELGDEETYSCMVCDVKFIQDSDLQLHIKSHKLESSYETVQLKKDISEDPDMQPSKCLDATSVASDHLGDTSKSEEAPACEDSSLQSGAAPPCEDSSLQGTCQPKKTIVFTLEPEYDEENNFCITCNQRLSSKETFRYHKKKHRSHIRYWKLRKGLKLDNRRTRTVFSKNPIFDNKKNFCVTCNRKFASKPSFRSHKSQHRRLIREKTLKFCCELCPRRFGTDFGLREHVVAHHGDEIPKFLQDDPTYLECRFCFREFEEPTQCYQHEQSHAGEKKPYQCPLCPETFTTHLQRKIHKLIHRKSGWKPKEEVKFVFSENPKFDDVNHFCITCHRGFASRGSLGRHKGLHTKQIIERQGNLSKDTIRCNDDDVEDVKGDANNSLDSHYFSDNSSQTSYEKIQRKSTITTDTDKAEEVANGSFVRIEPTSPEDPDQTLKPNYSGSIVFKLEPHFDEENKFCITCNRQFDSNKAFRTHKDGHKAKIRKWKITNGILPKTTISCEFCCSQFRSEDGLRKHVVKHHGDKIPTSLRDDPTYLQCRFCFKEFEKPTERYEHEKSHAREEKRYQCPFCPKSFIDHFKRKIHESLHRENRWKPKVQVRMVFSESPKFDDKKRLCITCNHEFISKHSFNVHKRRHRMKIREKQGMLQKVTTYCELCSREFKSENGLRRHLVPNHGDKIPTFLKNDPTYLQCKFCFKQFEKPTERYQHEKSHPREERPYKCSLCPQSFTTLSNRKTHESLHREAIRKPKERRNFVFSENPKIDDKKRFCITCNSGFTSKSSLNNHKQKHRMRIREKQGNLPNSTVRCEFCPRQFRSEIGLREHIVPHHGDKIPSSLKDDPSYLQCRFCHSRFDRPTERHQHEKIHANEQKPYQCSTCSKSFGTGTERKTHEAIHKEDRPFRCSQCSCSYKIASSLSRHVRNAHSGIKPIIYGTFGEPDDSKSNLTSHKLTNTKDKDCELQSDKQPLELRTNCEKMQLETDGVASVVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -