Hill008362.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- Znf784
- Assembly
- GCA_905115235.1
- Location
- NC:7200224-7202376[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 1e+02 3.3 0.2 1 23 64 87 64 87 0.91 2 15 0.00062 0.034 14.2 1.7 1 23 153 175 153 175 0.97 3 15 0.029 1.6 9.0 2.0 3 23 205 225 204 225 0.95 4 15 0.0082 0.45 10.7 1.1 2 23 242 264 241 264 0.96 5 15 2.8 1.5e+02 2.7 2.5 2 23 280 301 279 301 0.93 6 15 0.0005 0.027 14.5 0.3 1 23 308 330 308 330 0.97 7 15 0.086 4.7 7.5 1.5 3 23 370 390 369 390 0.96 8 15 0.0099 0.54 10.4 0.3 1 23 407 430 407 430 0.96 9 15 9.6 5.2e+02 1.0 2.2 2 23 446 467 445 467 0.93 10 15 0.0003 0.016 15.2 0.2 1 23 474 496 474 496 0.96 11 15 0.00032 0.017 15.1 1.8 1 23 501 524 501 524 0.95 12 15 0.021 1.1 9.4 0.4 1 23 532 554 532 554 0.93 13 15 0.0031 0.17 12.0 0.5 1 23 560 582 560 582 0.98 14 15 8.7e-05 0.0047 16.9 1.8 2 23 589 611 589 611 0.96 15 15 0.00059 0.032 14.3 3.1 1 23 617 639 617 639 0.99
Sequence Information
- Coding Sequence
- ATGAACGCGGACGATACTAAGTACATTTGCCTCCCGGCTGTGGATATCAAAACGGAATATGAACCAAAGGAAGAAATCCTGGATGAGACCTTAGTGAGCTATGGATTAAGTTATCCTGGAAGTGATCCAACCAGTGGCCACGAAACAAAGTGCGGCAGTATATTTCTCTCTGTTGAACGAACGTATATATTTGTCTGTGAGTACTGCTGTGCTCGGTTTGGAGACATGGGATCACTAGGGGTGCACCTCGAGAATGTTCATTTCGACTACATCAAGCAGGAGGATTTCAGACTTGAGACAGTACCCAAGGAAGAAGCGGATCCTGACTGTGATACGATTGAGGATGAAGCATACCCGGAAGAGCAAGTACCATCGACAGACATCACCACAACTAGCACGGATACCCCAAGCACTTCGGCAGCAGCCACACCACCAGCCCCCACCAAGACTAAACCCTACGCCTGCAAAGAATGCAATAGTCAGTATTCAACGCGGAAGGCATACGTACGTCACATGAAGCAGCACGGACTTCCCGAGACTCAGACTCCTCCCCAGAAACGAAGAGACGTAGTCTATGCCCTCCAACCTGACTTTGACGAGGAAAAGAACTTTTGCAACACATGCAATCTTCAGTTCGAAACCAAAAGACTTTTTAGAAATCATAAAATTGCACATTTGGACAGAAATCGGAAAGAAGAAAGAGCCATCGAGACCGCACAGCTCACATGTGAACTCTGCGGGTGTCAGCTAACTTCAGCATATAAATTCAGAGCCCACCTGGCTACAACGCATGGGGATGAAATTCCAACGTCACTACAAGGGGATGCGTCCTACCTCAAGTGCTTGTTCTGCCATCTAAAATTCGAAAAACCAACAACTCGCTTCGTGCATGAAGAATCTCACAATACCGAGGAGAAACCCTACCGATGCTCAGTCTGTCCGGAAACATTTGCAAGAGCAAATCAGCGTCAGACCCATGAAAGCATCCACTCCCTCACCTCAACTTCAGCGCAACAACCGAAAGCGTTAGAGACCAAGAATCAGAGCAAATTCAAGACCATAGTTGTGTTCGCTTTGGAGCCGAGCTACGACGAAGAAAGGAACTTCTGCAACACATGCAACCGCCAGTTGGACTCGAAATCGGCTATGATGAACCACAAAAAGGCTCACAATTGGAAGATCCGGCAGCAAAGTGATGACAGACCAAAAATCGAACAGTTTCCTTGCGAACTGTGTGATCGTCAGTTGACTTCCGCATATCGATTCAGATCTCACGTAGCGACCATGCACGGGGATGAAATCCCGAAATCCCTTCAAGGCGACCCGGCGTACCTCAAATGTCTATTTTGCCATTTGGACTTCGAGAAACCAACAGTCCGCTTCCAACACGAGCAAACCCATAACACTGAAGACAAGCCCTACCGATGTTCAATGTGCCCGAAAGCCTTCATGCGATGGGGGGACCGAAAAACACACGAAGCTGTCCATCAgcggaaacctttcatttgcccGCATTGCCCGAATATGTATAAAACTCGCTTGCATCTGAGGACCCATATTAACGGCGCTCACACTCAAACGGATACCAAACAATATCCTTGCGAATATTGTGGGAAACTCTTCGAGTCCGTGGCTGAGCGGAAGTTCCATGTTCGGACCCATAAGAAGCAAATTCTCTTCGAGTGTGACGAATGTGATGCGAAGTATGGAGAGCGACGCAACTTGCTTTTGCATAAGAAACGCCATCAGAATAATCAAGATGAAAAATGCGAAATTTGCGGGAAGTTCTTCCTTACGAAGAACCATTTGAAGGATCACATGATCATTTCGCATTCCGATAAGCCAGCCTACAAGTGTTCACATTGCGACAAGGAGTTTTTACAGAAGAGGAGTTTCATTGGGCATTTGCGCGTGCATAATGAGAACAGCTAG
- Protein Sequence
- MNADDTKYICLPAVDIKTEYEPKEEILDETLVSYGLSYPGSDPTSGHETKCGSIFLSVERTYIFVCEYCCARFGDMGSLGVHLENVHFDYIKQEDFRLETVPKEEADPDCDTIEDEAYPEEQVPSTDITTTSTDTPSTSAAATPPAPTKTKPYACKECNSQYSTRKAYVRHMKQHGLPETQTPPQKRRDVVYALQPDFDEEKNFCNTCNLQFETKRLFRNHKIAHLDRNRKEERAIETAQLTCELCGCQLTSAYKFRAHLATTHGDEIPTSLQGDASYLKCLFCHLKFEKPTTRFVHEESHNTEEKPYRCSVCPETFARANQRQTHESIHSLTSTSAQQPKALETKNQSKFKTIVVFALEPSYDEERNFCNTCNRQLDSKSAMMNHKKAHNWKIRQQSDDRPKIEQFPCELCDRQLTSAYRFRSHVATMHGDEIPKSLQGDPAYLKCLFCHLDFEKPTVRFQHEQTHNTEDKPYRCSMCPKAFMRWGDRKTHEAVHQRKPFICPHCPNMYKTRLHLRTHINGAHTQTDTKQYPCEYCGKLFESVAERKFHVRTHKKQILFECDECDAKYGERRNLLLHKKRHQNNQDEKCEICGKFFLTKNHLKDHMIISHSDKPAYKCSHCDKEFLQKRSFIGHLRVHNENS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -