Hill005438.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- Rreb1
- Assembly
- GCA_905115235.1
- Location
- NC:9345020-9444063[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0087 0.47 10.6 0.6 1 21 197 217 197 219 0.95 2 13 0.00028 0.015 15.3 0.2 1 23 229 251 229 251 0.98 3 13 1.9e-05 0.001 19.0 7.5 1 23 257 279 257 279 0.98 4 13 0.12 6.7 7.0 4.0 2 20 424 442 424 443 0.95 5 13 0.0069 0.37 10.9 0.1 1 23 646 668 646 668 0.97 6 13 2.6e-05 0.0014 18.5 0.9 1 23 677 699 677 699 0.99 7 13 0.00068 0.037 14.1 2.0 1 23 705 728 705 728 0.97 8 13 0.0039 0.21 11.7 2.2 1 23 1038 1061 1038 1061 0.96 9 13 0.00031 0.017 15.2 0.7 2 23 1351 1372 1350 1372 0.97 10 13 0.12 6.5 7.0 6.3 1 23 1378 1401 1378 1401 0.97 11 13 0.14 7.7 6.8 3.5 1 23 1465 1488 1465 1488 0.97 12 13 0.05 2.7 8.2 0.9 3 23 1536 1556 1534 1556 0.92 13 13 0.002 0.11 12.7 4.7 1 23 1562 1584 1562 1584 0.99
Sequence Information
- Coding Sequence
- ATGACTAATCGAATTCGAACCGAAGTGCCaccgataaaaataaaaattacaaaaattatgaaaatgaatCAGCAACAATTGCAAGTGGTTGAAATGATGGAGCAGCATCGTCGCGCTTCAATCACATCTGAATCATCTGTGGAAGTCATGGATCTGGCGCGTACTCCAAACCAAAGAATCAATCGAGCCCCAAACAATGACTCGAGTCCCAGCAATTCGGAACACAATGAATCCGATAGCTACGAATCAGACACGGAGGAATGTCCTTCAACCAACAAACCCCATCCAAACAGTTTCTCCAGCAACGAGCGAAGGAACTCAAGGATCAGCCTCAACTCGAATGGCGGAAATATTCGGAAGAAATTTCGAAGTAGTACGCCCAACGCTAATATCAACGCgaataattataataacaataacaacaatttGTTGACGACAAATGCAATAAACAATAGTTTAGTATCTAACAACACATCGAATCCACAAACAGATCGAACCCAGAACGAGTCCGGCTTCGTAGATTTGAGTAGTCAACATTTGAATTCTAGTCCGGAGCCACCGGGAGCCATTGAACGCGATGATGTTAAATACATTTGTCCAATATGCGAGGTAGTCTCAGCCACTCCACACGAGTTCACCAATCACATTCGATGCCATAACTACTCCTCTGGTGATGCTGAGAATTTTACGTGCCGTATCTGCTCGAAGGTACTTtcgtcagcctcctcattggaCCGTCATGTTCTTGTGCATACGGGCGAGCGTCCATTCAATTGCAAGTACTGCCACCTCACGTTCACGACAAATGGAAATATGCACCGGCATATGCGCACTCATAAGCAACATCTACAGCAGCGGAACGCTAACTTAGCCGGAGGCGGCGGTGGTGGCGGTGTAGGTGGCAATAGGGGCCATGCTCCTCCTGGAAGTGCAAGCGGCGGCAGTGGAAATGGCGATGGGGAGAGCGATGAAAGCGACGGTTGCTCAACGGACTCCAGTGCAAGCAGCTCAAACAACAACAAgtacaacaacaataataacaacaataacaacaacaacaacaattacaAGCGAAAGAGCACCGACGATGATAGTGGGCTCGTGAAAAGGCGAATGAAGACCATCAACAATAACATCATCAGCGAATCCGAACTAGAATACACCGGGTCCTTGCAGAAGCTCTCCTGTCCGCTCTGCAACCGGAACGACTTTGCCAATATGTTTGCCCTTGGTTCGCATATGGATCGCGAACACCCCGGCATCCCcgccaaatgtcgacaatgtgAGATGGTCTTCAAGAGTCATAAGTCCTTAAACGCTCATCGTTGCCCACAAAAGACAAATATCACCCAAGGATTCAAAGACATGACATTCGTTGACTTCTCCAGCGAGAAATTCCCGCTTATTGCCAAGTCCCTGTGCGAGCAGTCAATCCACACCCCAATCACTAATCAGAAATTTGAATGTTTGAAATGTTTTCGCGCCTTCCCGTGCGCCAGTGCCGTTGAAATTCATGCCAAAGATTGTGGGGATTCCCCGCAGGACTACTCGATTAGAAAACGTGCCGCCAGCGAAAGTTCAGAGGAGGAAACCCGTCGAGATGAATTTTTTGCTCATTTAGATTTACGAAACAAGTCTGCCATGAGTTTGGCCAGCACAATGTCATCTCCACGAACATCTGAGAAATCAgacacaaatgtaaaaactgatCTCGAGAAGACATCGCAATCTGCGAATTATAATTGTAACGAATCCAAGGATTTAGCTGATATTCAGTCGATTTTGAACGTGACCTCGTCATCGAATAGTTTCCTGAGGAATTTCGAGAGTGTTGTCAACACACCACCAAACAGTGATTATCTGCTGGGAAAGGACGAAGAAGAAGCCCAGGACGCTTTCACATCCGAGTTCCGGAAAATGAAGCTTCGAGGCGAGTTTCCATGTAAGTTGTGCACTGCAGTGTTTCCCAATTTACGAGCTCTGAAAGGACACAATCGGGTGCATCTGAGTGCTGCAGGAGCAGGACCGTATCGATGCAATATGTGCCCATATTCCATCCACGATAAGGCTGCTCTCATCCGACACATGAGAACGCACAATGGCGACCGGCCTTATGAATGCGCAGTTTGCAATTATGCATTCACGACAAAAGCGAATTGTGAACGGCACTTACGTAACCGACATGCAAAGACCACAAGAGAAGAAGTGAAACGTGCCATAATTTACCATCCTTCCGAGGACTCAAGCTGCGAGGATCCCATCAAGAAACTCCAACTGTTCTCCTCTCCTGAACTTGATGACGACGAGCCATCAAGTGCTCCGAAAGACCGATCAACGCCAGTTTCACACCTGAAAGAGATGCTGCAATCGAGCAGTCCAATGAAAATCCAAGTGAAAAGTCTTGAAAAGCTGATGGACAACTCAAACGTTACGATGAGACCGACTGAAGAGAAGGAGAGTGACCTAGACAGCAGTGCAACATCCACTGACTGCACTCGACCGATCGACCTGAGCATGGACGTTTTAGATCTAAGCAAGAAGACTAAAGTGGAAGAACCAAAGCTAGTTGAGAAACCTGAGCCGAAACCTACAGATTTGTCAGCGCTAGAAAAAAACCATCAATGGCTTCTGGCTCAACAGCAATTCTTCAAGGATTCCATTCCACAAATCGATCCTGCCCACTATCTTCAACTTTCTCAGCTCTGTCGCAATCTTATGTTTCCTTCAATACCGCCCTTCCTGTTCCCGAATTCATTTCTTCCAAATAACTTCGGCGATCTCAATAAATTTCCGCCTATGCTGCTGAACCCCATGTTTCCGGGTGCCACTGAAGGAACCCCAGAACCGGCAGGAATGCGTGTTCAATCCAATGCTACACCGCATTCTCCGCTTAAATCTCTGGAAAATCCACTGCAAAATTCTCCGGCTGCAATTCAGCTTCATCCGACGGTACCACAACAACTGAACATTCCCCGTCACAGCCTAGGTAGTAGCCAGCCTCCAGCGAATATGATGCCGCAGATCCAGAACACTGGTCCGGTTAAAATGGTCATAAAGAATGGAGTGTTAATGCCAAAACAGAAACAACGTCGTTATCGAACCGAAAGACCTTTTACATGTGAACACTGTGCAGCCCGTTTTACTCTTCGCTCGAACATGGAACGTCACGTTAAACAGCAACATCCTCAGTTCTGGGCTCAACGCCAACGTGCAGGACATCATATAATGCGCCGAAGTGGATCAGCTATGTCACAAATATCCTCGACATCTGTTTCGCCCCAAACTCCTGGTTTGCCAACCAATCATTTCACTGCCATATCGGATCAAGTGAAATACGCTATTTTGGCGCAACAGTTGAAAGCTCGCAAGGACACTGACATCCTTCAACAAGCTTTAACCCAAAACAAAAATTCCGACAGCAATCACTTGAACTTAATTAACAATAACGTCCACCAGAATTCGGTGGTAGGAAATGGCCTAGAGGATGATGACCCAAAGCTGATCATTGACGAAGGAAACGAAGGGAATGACGAAGCCGAGGAAGATGACGAAGACGATGACATTTATGAAGAGTCCAAGCCTGAAGATCTCTCCTCGAACACATCAACCTcagctgcaagaaaagtcgCTGATAACATTCTTGAACAAGCAATGAAAACTTCATCTCAAGCAGTTTCCAATGATTCCGCAATGGAAGATGACGGTGAACTCAATGAGGCTCACCTGAACGCTTCGAACAATATGTTGGCTCAAGCCGAATCCGTGGGAAAGTACCTCAAGAAGGTGGCTAACTCGTCCTTCAAAGATGATTCGTCCGATCTGGTGCCCATTTCCAAGCTAGTTGACAATGCTACCAACTCCTTGACATCCTTCAATAATTACTTTCGTCCAACCGACATGGCCAATCACATGGAACAAAGTGATGAGGAAGGACTAGTAGCATCTGGAAGCACATCTGAAAGCAACAATTCGGGAAACGAGGAACCCCAAGGAAATACCGGTCGCGATGGCAAACGCAAGTCAGCTTATAGTCTGGCACCGAACAGAGTCTCTTGTAATTATTGCCAAAGAACATTTCCTTGGACGAGTTCTTTAAGGCGACATATCCTGACACATACTGGACAGAAACCTTTCAAATGTTCACATTGTCCGCTTTTATTCACTACAAAGAGCAATTGTGATCGTCATTTGTTACGGAAACACGGAAATATTGAATCAGCCGTGTCACTTTACGTGCCTATCGAGGACATCCCTGAACCAGTTCCCATTCCAAGGGTTGAAGAACCGTCAGAGGAACAGCACAAATCTCTTCAGTTGGCGACAAGTGGCTTAAATTTGACAGTCCCCAATGTGAAGTCGATGGAGCCACTGATGACATCCTCGGATTTGCCATTCAAATGCCATCTTTGCGACAGCTCCTTCGCTGAACGAAGCCAATGTTTGGAACACATAAAAGTGAATCACTCACAGGAGTTTGCACTGCTGCTGGCAAAAGGAGCTATAGACGCCGAAGCGGACTACAACCAAATCCACTCAACGGAGGATGATGAACGGGTGGGGGAAGGCCGGGGCAAATATCCCGACTACGCCAACAGGAAAGTAATGTGTGCCTTTTGCATGCGCCGGTTTTGGTCAACGGAGGATCTCCGCCGTCATATGCGAACTCATTCTGGAGAGCGTCCTTTTCAGTGTGAAGTCTGCCTGCGGAAGTTCACTTTGAAGCATAGCATGCTACGCCATATGAAGAAGCACAGCAACGGGCACAGCAACCATCAATCCAGTCAAATCAACAGTGGCTCGGACATGTCTGAAGATGAACAACCCACTACAGTGTTCCATAAGAATCCTTTGCTTAGTCAAAAGATCCGCGAAGCACTGAGTCGGGCCGAGGCTTGGCGAAACAGTGCCCTGAGTGGTGACCACAAAGAAAATATTGCTCAACATTCTCAAGGGAAGAGAGCGGACAAAGACGGTTCCGGTGCCAGCGGAATTGGCAATGACGAGAACTCAGATCTGATTAGTGACCTGTTAGGAATCACTGGCCAGGGAATTCTCAACAAACTCTTATCGTCACCAGACGAAGCTGCCAAATTGCTCGGAGTCGACAAATAA
- Protein Sequence
- MTNRIRTEVPPIKIKITKIMKMNQQQLQVVEMMEQHRRASITSESSVEVMDLARTPNQRINRAPNNDSSPSNSEHNESDSYESDTEECPSTNKPHPNSFSSNERRNSRISLNSNGGNIRKKFRSSTPNANINANNYNNNNNNLLTTNAINNSLVSNNTSNPQTDRTQNESGFVDLSSQHLNSSPEPPGAIERDDVKYICPICEVVSATPHEFTNHIRCHNYSSGDAENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHLQQRNANLAGGGGGGGVGGNRGHAPPGSASGGSGNGDGESDESDGCSTDSSASSSNNNKYNNNNNNNNNNNNNYKRKSTDDDSGLVKRRMKTINNNIISESELEYTGSLQKLSCPLCNRNDFANMFALGSHMDREHPGIPAKCRQCEMVFKSHKSLNAHRCPQKTNITQGFKDMTFVDFSSEKFPLIAKSLCEQSIHTPITNQKFECLKCFRAFPCASAVEIHAKDCGDSPQDYSIRKRAASESSEEETRRDEFFAHLDLRNKSAMSLASTMSSPRTSEKSDTNVKTDLEKTSQSANYNCNESKDLADIQSILNVTSSSNSFLRNFESVVNTPPNSDYLLGKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDPIKKLQLFSSPELDDDEPSSAPKDRSTPVSHLKEMLQSSSPMKIQVKSLEKLMDNSNVTMRPTEEKESDLDSSATSTDCTRPIDLSMDVLDLSKKTKVEEPKLVEKPEPKPTDLSALEKNHQWLLAQQQFFKDSIPQIDPAHYLQLSQLCRNLMFPSIPPFLFPNSFLPNNFGDLNKFPPMLLNPMFPGATEGTPEPAGMRVQSNATPHSPLKSLENPLQNSPAAIQLHPTVPQQLNIPRHSLGSSQPPANMMPQIQNTGPVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHVKQQHPQFWAQRQRAGHHIMRRSGSAMSQISSTSVSPQTPGLPTNHFTAISDQVKYAILAQQLKARKDTDILQQALTQNKNSDSNHLNLINNNVHQNSVVGNGLEDDDPKLIIDEGNEGNDEAEEDDEDDDIYEESKPEDLSSNTSTSAARKVADNILEQAMKTSSQAVSNDSAMEDDGELNEAHLNASNNMLAQAESVGKYLKKVANSSFKDDSSDLVPISKLVDNATNSLTSFNNYFRPTDMANHMEQSDEEGLVASGSTSESNNSGNEEPQGNTGRDGKRKSAYSLAPNRVSCNYCQRTFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNIESAVSLYVPIEDIPEPVPIPRVEEPSEEQHKSLQLATSGLNLTVPNVKSMEPLMTSSDLPFKCHLCDSSFAERSQCLEHIKVNHSQEFALLLAKGAIDAEADYNQIHSTEDDERVGEGRGKYPDYANRKVMCAFCMRRFWSTEDLRRHMRTHSGERPFQCEVCLRKFTLKHSMLRHMKKHSNGHSNHQSSQINSGSDMSEDEQPTTVFHKNPLLSQKIREALSRAEAWRNSALSGDHKENIAQHSQGKRADKDGSGASGIGNDENSDLISDLLGITGQGILNKLLSSPDEAAKLLGVDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -