Hill012853.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- -
- Assembly
- GCA_905115235.1
- Location
- NC:54990324-54998958[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0012 0.067 13.3 6.1 1 23 117 139 117 139 0.98 2 11 1.4 75 3.7 0.4 2 19 144 161 144 166 0.71 3 11 1.8e-05 0.00097 19.1 1.7 1 23 171 194 171 194 0.98 4 11 0.69 38 4.6 1.0 1 23 201 225 201 225 0.81 5 11 0.0014 0.075 13.1 2.6 1 23 303 326 303 326 0.94 6 11 0.0086 0.47 10.6 0.2 2 23 332 353 331 353 0.93 7 11 7.4e-06 0.0004 20.3 0.6 2 23 375 396 374 396 0.98 8 11 4.1e-07 2.2e-05 24.2 0.7 1 23 402 425 402 425 0.97 9 11 2.9e-05 0.0016 18.4 1.6 3 23 433 454 432 454 0.97 10 11 2.6e-06 0.00014 21.7 2.6 3 23 462 482 460 482 0.94 11 11 1.8 99 3.3 3.7 3 23 490 511 488 511 0.90
Sequence Information
- Coding Sequence
- ATGGAGCCATGCAGACTATGCCGAATGAAAAGTGAGAAGTTAATTTCTATTAGAATTAATGGCGAACCAGAAAGTAGTGACGTGACCCGTAATATAAAGGAAATGCTGAAAATATTTCGCAATCTGGAAaCACTGTACCTAGAGGACTTTCCGAATGCCGCTTGTTCCATTTGCTGGCAAAGCTTGAGATTTTGctatcagttttattcaaaaatacttAATGCAAAAGAAACCTTGTCAGACCAGTTAACATCCGAAAATCCGAAGTGGCGGAAAATAGTGCCTAAACTGGACAAGGAAATCGAAACCATAGAGTCCGAACGCAAAGCGTCTAATCGAAAACGAAGATATACATGCGAAGAATGCTCAAAGTTATTTACATCACATCGGCAACTGCTTTCTCACCATAAATCTCACGAAGTTGAGAATGTCTGCCAGCATTGTGGAACTTTCTTTCTAGATGACCAAGTACTTCGCGATCATGTAGCAAATAATCATATTGACTTGAAGTATGAGTGCCTGAGATGCCAAACATCATTTGTGTCAAGGAGTTCTCTTTGGAAACATCTAAAGAAAACCCATGATACAGTTGATCGGGAATATTACTGCAATGAATGTCAAAGGTCTTCGTTCAAAGGTCGAGAGAGAATTGAAAAACATATCAACAGCACTCATCCAATTCCTCGCAAAGTGATGACAAACAGCCAAATTTTCACAGAGAAAGCTGATGATATTGAACCAGACATGATTGAAGAGTTTCTTGAAGACATGGACGAAGAATTTCTAGACGATATCTTGCTGAATCAGGATCAGAATTCATTTTGTTGGGATGAATTAAGCCTAACACCGTTTGAAGAAGATTTCAATACATCACTTCGCCCCGCAGAGGTATTTGAAGTCGGGCGGTACAGATGTCCGCAATGTACGCAGCACTTTCCCGGACAGTATGGATTAACCCAACATTTGGCTCACTATCACGACGAATTTGTTCTCATATGCAACGCGTGCGGGTCGGCTTTCAACCGAAGTGCAAAGCTTAAAGAGCACTCCAATTTACACGCGACAGATACATTAAACGATATAACAGCGTTAGCACAACTTTCCGCCCATTCCTCCTCCGTACAATGTTCAATTTGCGATAAAACATATAAAACGATGGCTGGACTAAAATATCATTTGAAAACGCACACTGGAGTTAAACCATTCACCTGTCCATATTGCAAGAAAAAATTCACCGCTAATGTGAATCTGAACGCGCACATACGATACGTTCATTCGGAGACCAAACCCAATCTATGCACCCTTTGCGACAGGAAATTTGCAACTTTGGATCACTTGAAGAAACACGTAATGAGTGTCCATCAAAAGGAGCGAAAACATCTGTGTAGTGTTTGCGGAAAAAGTTTTTCGCAGGCCTCGCATCTTACCCAACATTCACTCATTCATTTAGACCAAAAACCATTTTTGTGTAATTGCTGTGAAGCAGGATTTTTCAAAAGGATTGATTTGCAGCGACATATAGAGAAATGTCATGTGAGTCAGACGAAGAAGGAAGAGTGA
- Protein Sequence
- MEPCRLCRMKSEKLISIRINGEPESSDVTRNIKEMLKIFRNLETLYLEDFPNAACSICWQSLRFCYQFYSKILNAKETLSDQLTSENPKWRKIVPKLDKEIETIESERKASNRKRRYTCEECSKLFTSHRQLLSHHKSHEVENVCQHCGTFFLDDQVLRDHVANNHIDLKYECLRCQTSFVSRSSLWKHLKKTHDTVDREYYCNECQRSSFKGRERIEKHINSTHPIPRKVMTNSQIFTEKADDIEPDMIEEFLEDMDEEFLDDILLNQDQNSFCWDELSLTPFEEDFNTSLRPAEVFEVGRYRCPQCTQHFPGQYGLTQHLAHYHDEFVLICNACGSAFNRSAKLKEHSNLHATDTLNDITALAQLSAHSSSVQCSICDKTYKTMAGLKYHLKTHTGVKPFTCPYCKKKFTANVNLNAHIRYVHSETKPNLCTLCDRKFATLDHLKKHVMSVHQKERKHLCSVCGKSFSQASHLTQHSLIHLDQKPFLCNCCEAGFFKRIDLQRHIEKCHVSQTKKEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -