Basic Information

Insect: Hermetia illucens
Gene Symbol: -
Assembly: GCA_905115235.1
Location: NC:31357558-31362778[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.8 97 3.3 2.9 2 23 259 281 258 281 0.93

2 10 1.5 84 3.5 0.1 6 23 290 307 290 307 0.97

3 10 5e-05 0.0027 17.7 2.8 1 23 313 335 313 335 0.98

4 10 1.4e-06 7.8e-05 22.5 1.2 1 23 343 365 343 365 0.97

5 10 2.5e-05 0.0014 18.6 0.7 1 23 373 396 373 396 0.97

6 10 8.5e-06 0.00046 20.1 0.1 1 23 402 424 402 424 0.98

7 10 0.0012 0.063 13.4 1.1 2 23 432 453 431 453 0.96

8 10 0.0006 0.033 14.3 0.5 1 23 458 481 458 481 0.97

9 10 5.1e-07 2.8e-05 23.9 0.4 1 23 486 508 486 508 0.98

10 10 6.3e-05 0.0034 17.4 0.8 1 23 514 537 514 537 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.8	97	3.3	2.9	2	23	259	281	258	281	0.93
2	10	1.5	84	3.5	0.1	6	23	290	307	290	307	0.97
3	10	5e-05	0.0027	17.7	2.8	1	23	313	335	313	335	0.98
4	10	1.4e-06	7.8e-05	22.5	1.2	1	23	343	365	343	365	0.97
5	10	2.5e-05	0.0014	18.6	0.7	1	23	373	396	373	396	0.97
6	10	8.5e-06	0.00046	20.1	0.1	1	23	402	424	402	424	0.98
7	10	0.0012	0.063	13.4	1.1	2	23	432	453	431	453	0.96
8	10	0.0006	0.033	14.3	0.5	1	23	458	481	458	481	0.97
9	10	5.1e-07	2.8e-05	23.9	0.4	1	23	486	508	486	508	0.98
10	10	6.3e-05	0.0034	17.4	0.8	1	23	514	537	514	537	0.97

Sequence Information

Coding Sequence: ATGGACTCTCATATTACAAAGAATTCACATATCTCGCAAAAGTTAgaatatttccaccaaacaaaCAGTAAAAAATGTCGTTTATGTTTAGCATCACTTGACACATTAATTGAGATATTCAGCGAGGGAGCTGTGCAtatgaaaattaatgaaaagctTAAGGAATTTTGCCATCTTGCAATTACAGAAGAGGACCCCGCCCCAAAGACAATATGCTTCACTTGCTTGAATGAGGTTAATCGGTTCAGTGATTTCTACAAAAGAATTCAAGAGAATCAGAAATTACTCACACTTTCCTTTCAACCCTCGATTATTCACGAAGCAGCCAAATTTGCAGGTTTAGCTCAGGACATGAATGAAAACGATGAAAGCGAAGAGCCACTAATAATAGCCATTGCTGAAGAAATATGCCAGGCAGATGATATTCAAGAGAATGTAGAAATCCTCTATGAAAGTGCGGAGGCTAATGGTGCCGATCATGATGACCCTGAACTAGTACAATGCGAAATTGTGTTAcaaaaattatcggaggaacCGAAATCTGAGTCCTTTCCCCTAACCGACAGGAATGAAGCGACCTCCACAAATGATTCAGACGTCGAACATCATGAATTGGATACAACTTTCTACGCAGAAGATCAACATGATTTATCGGAATCAGATCATGACGACCGTGCCCTCTCTCCACCAACCGCTTTTAGCGAAGAAAGTACAAAAAGCCGTGCCAAACATAGAATTGCCTTGGATAAGCCAATTCGTGATTTCTTCGACTTGCACTGTGAAAAGTGCAATTCGAACTTCCAAACGTTCCAAGGAATTCGGAATCATATGCTGCAAAAACACGACGAACAATTTTACTTCGTCTGTTGTAATCGGAAGCTGTATCGAAGGGATGCTGTTATGGCACATATCAGTTCGCATTTAAATCCGCAGAAATTCACATGTGAGGTCTGCAATCAAGTGTGCAAAAGCAAAATCACCCTGAAAGTGCATATGAAGCAACACATTCCAAAAGATCAACAGCCTTTTGCTTGCGAAAAGTGCGGATTTCGGTTTGCTTTAAAATCACAACTAAAGAGTCACATGAACACTCATCTTACAAACGAAGAAAAAAGATTCGTCTGCAACGAATGCGGCAAGCCATTTGCCTTCAAATTTGTCCTAGAAAAGCATAAAAAGCGAATACACATCAAACAAAAGAACTACATGTGTGAGATCTGCGCTCGATCGTTTGTAGACGAAGTCAACCTAACGGCGCACAAACGAATCCATGATACAACTACGCCACGTCTGGAATGTCCGAAATGTCATGCTCTCTTGAAGACAaagaaaaccttgaaaattcaCATGCTTGTGCATAATCCATCCCAATTTTCGTGCGAGTCCTGCGCTAAGGATTTTCCaacaaaaaatggtttattGAACCACATACGATATTACCACACGGATAGGAAGTATCCTTGTGAAACATGTGGCAGGGTTTTTAAGAAATCATTGAATTTGAAGGAACACATGGCAACGCACACCGGCGAGATTTTGTACAACTGCGAATACTGTGATAAAACATTCAATGCTAAAGCCAACCGATATGCTCATATCAAGAAAGTTCACCCCAACGAATGGGCAAACAAGCGGAAATTAAGGTGGCGAATAGAAGATGAAAAGTATTCAGAATAA
Protein Sequence: MDSHITKNSHISQKLEYFHQTNSKKCRLCLASLDTLIEIFSEGAVHMKINEKLKEFCHLAITEEDPAPKTICFTCLNEVNRFSDFYKRIQENQKLLTLSFQPSIIHEAAKFAGLAQDMNENDESEEPLIIAIAEEICQADDIQENVEILYESAEANGADHDDPELVQCEIVLQKLSEEPKSESFPLTDRNEATSTNDSDVEHHELDTTFYAEDQHDLSESDHDDRALSPPTAFSEESTKSRAKHRIALDKPIRDFFDLHCEKCNSNFQTFQGIRNHMLQKHDEQFYFVCCNRKLYRRDAVMAHISSHLNPQKFTCEVCNQVCKSKITLKVHMKQHIPKDQQPFACEKCGFRFALKSQLKSHMNTHLTNEEKRFVCNECGKPFAFKFVLEKHKKRIHIKQKNYMCEICARSFVDEVNLTAHKRIHDTTTPRLECPKCHALLKTKKTLKIHMLVHNPSQFSCESCAKDFPTKNGLLNHIRYYHTDRKYPCETCGRVFKKSLNLKEHMATHTGEILYNCEYCDKTFNAKANRYAHIKKVHPNEWANKRKLRWRIEDEKYSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -