Basic Information

Insect: Hermetia illucens
Gene Symbol: -
Assembly: GCA_905115235.1
Location: NC:70896537-70953599[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.012 15.7 3.4 1 23 243 265 243 265 0.98

2 11 0.0014 0.076 13.1 9.5 1 23 271 293 271 293 0.96

3 11 8.5e-05 0.0046 16.9 6.4 1 23 299 321 299 321 0.98

4 11 0.00033 0.018 15.1 2.3 1 23 327 349 327 349 0.95

5 11 2.4e-05 0.0013 18.7 0.5 1 23 355 377 355 377 0.97

6 11 1.1e-05 0.00062 19.7 0.1 1 23 383 405 383 405 0.98

7 11 5.2e-05 0.0028 17.6 1.8 1 23 410 432 410 432 0.97

8 11 2.5e-05 0.0014 18.6 0.0 1 23 438 461 438 461 0.98

9 11 0.00032 0.017 15.1 0.1 1 23 560 582 560 582 0.97

10 11 0.034 1.9 8.8 2.7 1 23 671 693 671 693 0.95

11 11 0.0052 0.28 11.3 5.2 5 23 706 724 697 724 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.012	15.7	3.4	1	23	243	265	243	265	0.98
2	11	0.0014	0.076	13.1	9.5	1	23	271	293	271	293	0.96
3	11	8.5e-05	0.0046	16.9	6.4	1	23	299	321	299	321	0.98
4	11	0.00033	0.018	15.1	2.3	1	23	327	349	327	349	0.95
5	11	2.4e-05	0.0013	18.7	0.5	1	23	355	377	355	377	0.97
6	11	1.1e-05	0.00062	19.7	0.1	1	23	383	405	383	405	0.98
7	11	5.2e-05	0.0028	17.6	1.8	1	23	410	432	410	432	0.97
8	11	2.5e-05	0.0014	18.6	0.0	1	23	438	461	438	461	0.98
9	11	0.00032	0.017	15.1	0.1	1	23	560	582	560	582	0.97
10	11	0.034	1.9	8.8	2.7	1	23	671	693	671	693	0.95
11	11	0.0052	0.28	11.3	5.2	5	23	706	724	697	724	0.89

Sequence Information

Coding Sequence: ATGTGTGCCGCCCAAAGCAACGCGACCCAGAGTTTCGGGTACACCTGGGGCTTCGCAGATAACTCGCGGACGGAGTCTGTGGTGGAGATTTCACCGAATATCAACTACACTGTGAGCAGCGAAGCGATGCCTTATCTACAACTTGCAGATGGGATAACTGTCCAAAAGGATTTGAAAGGTACTATTGCTCACACAAATAAAGGAGTTGTCCGGAGGATGTTTGTGGTGAATGATGCTTTCCCAGGAGCAACACAACGCGTCATCACAACAGGAGGTACAGCAATAAAAAAACAGGACGTTATAAGCATAGGAATCGATAAGAATTATCAATCAGATCAATCTCATTCTATAGCAAATGGCATCCTTGATACAAAAACACAAACGATCTTGACCACCACAAGCGGAGGTAAGACACATTTCAGTCCCATTGGCCCGCTGCACCTTACTGCTGAAGAATGCAACGAAATTTTAATGAAACGGGCTATGGCGGCATCAGCCCAAAATCATGCGATTACCAGTGCAGACGGTCAACATGCAGATGACATTTTGCCAGGAATATCTGTACAAGTTCAGAAAGTAATCCAAGGTTTAGAAGACACCGAAGATTCTCAAGCGACTTCCTCAACACACTGCAAATTGGAACCGGTCCTAGAGATTTCACCTAAAGTTGAACTACCAGATCCAGAGCAAACTCAAACTGCGACCACAGTGGTGAAAGAGAGACCTTATTCTTGCGAAGAATGTGGAAAATCATTCTTGTTGAAGCATCATTTAACTACCCATGCACGAGTTCATACTGGGGAACGTCCTCATGTGTGCGTTCACTGCGGGAAGAGTTTTGCTCATAAGCACTGTCTAAATACACATTTGTTGTTGCACTCGACTGACAGGCCGTATCAGTGCAGTGAGTGCAAGAAAAGTTTCACTTTGAAACATCATCTTCTAACTCATTCACGAGTGCATAGCAGAGAAAGGCCATTTGTTTGCCAGGAATGCGGTCGATCGTTTCCCCTGAAAAGACACTTAGTCACGCATAGTAAATTCCACGCCGGAGAACGACCTTATGTTTGTGAAGAATGTGGAGAAAGCTTCGCGCAAGAAAATCACCTTATTATGCATTCAAGATTTCATGGTTCCTTAAACCCTTTCGTTTGTGGAGATTGTGGTGCTACTTTCCCTAGGAAGTTTCAGCTGGTAAATCACGGGCGTATTCATGGAAAGGTGCCGCATTCTTGTACAGTTTGTGGGAAGGAATTCCTGCAAAAACGAACCTTAATTTCTCATATGCGaATCCATACTGGCGATCAGCCTTACCCTTGCACCGGATGTGGTGATGGCTTTCCAACAAAGGCTGAATTAAATCAACATATTCGAATGATGCACGGAGGCATAAATCCAAACTCTGCCAGTACAACTGTTGTGGCGGGACACGTGGTAGCTGCAActcaacagcagcaacaacaacagcaacaacaacagcagcagcaacaacagcagcagcagcaacaacaacaacagcagcaacaacaatcacAAACACAACAGGCACAAACCATACACGTAAATCTACAGCATCAACCACAACAGCAACAACCGCAAACCGTTACAGTAGTTAGTAATCCTAACAATGCTTTAGTGACAACCATCGCAGCCTCAGACTCTGCAGGCAGGCCTCAATACGCTTGCCGTGAATGTGGGAGTGCCTTTAATAGTCGTGAAGCTTTGGCTCTTCATTTGCGACTGCATACCGGTGACAAAAGCTTAATGACTGACTTGTGCGCATTAACTGCTGCTTTGCCGGGCCATTTTCTAAATCCTTCGAATATAAATCAAGGTATGGCGACGGTGGTTGCAGCAAATCAAACTGTGGTGTCTCCAAATGCGGTACCAGTACAAATAATTTCATCAACTGGGCAAGTAGTTAGTCAAGCTGTAGTGCAGAGTACTCCACAACAGGCAAATGTTATGACGGCTGTGCAACCAATTCAGAGTGCTCCTAAGCCGAAAACGCATTTTTGCGTGAGTTGCGGAAAAGGATTCGCGGCGAAACATGGCCTCTTACAACATAACCGCCGACATCCGAATGGTTCATGTACCCTTCGTACCCACGTTTGTGAGTGTGGAAAGGCTTTCTTCCAAAAGAATCATCTCATGTTACATCAACGGCAACATCTGGAAACGAAACCAAATACCCAACAGaTAACACAAAGCGAAACCCCCCAACAGGAAGCATTGAatcagcagcagcaacagcagcaaTCACAACAAAACGCCCAGCTAGCCAATCAACAAACACAACAAGCTCAAACGCAGCAGCATACGATGACTCGTGAGGTGCTGATTGGAAACCAGCCAGTACACGTGCAGGTTCTGCAAGGCACAAACACGGCACAGGTTATTAAATATGAAATCAATATACCCCAAGAGGCACAAAACTTGGAGTGA
Protein Sequence: MCAAQSNATQSFGYTWGFADNSRTESVVEISPNINYTVSSEAMPYLQLADGITVQKDLKGTIAHTNKGVVRRMFVVNDAFPGATQRVITTGGTAIKKQDVISIGIDKNYQSDQSHSIANGILDTKTQTILTTTSGGKTHFSPIGPLHLTAEECNEILMKRAMAASAQNHAITSADGQHADDILPGISVQVQKVIQGLEDTEDSQATSSTHCKLEPVLEISPKVELPDPEQTQTATTVVKERPYSCEECGKSFLLKHHLTTHARVHTGERPHVCVHCGKSFAHKHCLNTHLLLHSTDRPYQCSECKKSFTLKHHLLTHSRVHSRERPFVCQECGRSFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCGDCGATFPRKFQLVNHGRIHGKVPHSCTVCGKEFLQKRTLISHMRIHTGDQPYPCTGCGDGFPTKAELNQHIRMMHGGINPNSASTTVVAGHVVAATQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQTQQAQTIHVNLQHQPQQQQPQTVTVVSNPNNALVTTIAASDSAGRPQYACRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLNPSNINQGMATVVAANQTVVSPNAVPVQIISSTGQVVSQAVVQSTPQQANVMTAVQPIQSAPKPKTHFCVSCGKGFAAKHGLLQHNRRHPNGSCTLRTHVCECGKAFFQKNHLMLHQRQHLETKPNTQQITQSETPQQEALNQQQQQQQSQQNAQLANQQTQQAQTQQHTMTREVLIGNQPVHVQVLQGTNTAQVIKYEINIPQEAQNLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00322793;
90% Identity: iTF_01089350;
80% Identity: -