Basic Information

Insect: Hermetia illucens
Gene Symbol: grau
Assembly: GCA_905115235.1
Location: NC:87507980-87541235[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.81 44 4.4 1.9 2 23 305 327 304 327 0.96

2 18 0.00025 0.013 15.5 2.7 1 23 360 382 360 382 0.99

3 18 0.00037 0.02 14.9 1.5 1 23 390 412 390 412 0.97

4 18 5.7e-06 0.00031 20.6 1.0 1 23 420 443 420 443 0.97

5 18 0.11 6.2 7.1 1.4 2 23 450 471 449 471 0.95

6 18 0.82 45 4.4 2.4 2 23 480 501 479 502 0.94

7 18 1.4e-05 0.00076 19.4 0.4 1 23 510 533 510 533 0.96

8 18 2.8e-05 0.0015 18.4 0.6 1 23 539 561 539 561 0.95

9 18 2.7e-05 0.0015 18.5 5.0 1 23 567 590 567 590 0.98

10 18 0.27 15 5.9 0.2 2 23 893 915 892 915 0.95

11 18 1.9e-06 0.0001 22.2 3.3 1 23 947 969 947 969 0.98

12 18 0.0015 0.081 13.0 3.0 1 23 977 999 977 999 0.96

13 18 2.3e-06 0.00013 21.9 0.5 1 23 1007 1030 1007 1030 0.96

14 18 0.11 5.9 7.2 0.9 2 23 1037 1058 1036 1058 0.95

15 18 0.012 0.67 10.1 2.3 2 23 1067 1088 1066 1088 0.97

16 18 0.0011 0.06 13.4 0.6 1 23 1095 1118 1095 1118 0.94

17 18 3.7e-05 0.002 18.1 0.6 1 23 1124 1146 1124 1146 0.99

18 18 6.7e-05 0.0036 17.3 5.7 1 23 1152 1175 1152 1175 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.81	44	4.4	1.9	2	23	305	327	304	327	0.96
2	18	0.00025	0.013	15.5	2.7	1	23	360	382	360	382	0.99
3	18	0.00037	0.02	14.9	1.5	1	23	390	412	390	412	0.97
4	18	5.7e-06	0.00031	20.6	1.0	1	23	420	443	420	443	0.97
5	18	0.11	6.2	7.1	1.4	2	23	450	471	449	471	0.95
6	18	0.82	45	4.4	2.4	2	23	480	501	479	502	0.94
7	18	1.4e-05	0.00076	19.4	0.4	1	23	510	533	510	533	0.96
8	18	2.8e-05	0.0015	18.4	0.6	1	23	539	561	539	561	0.95
9	18	2.7e-05	0.0015	18.5	5.0	1	23	567	590	567	590	0.98
10	18	0.27	15	5.9	0.2	2	23	893	915	892	915	0.95
11	18	1.9e-06	0.0001	22.2	3.3	1	23	947	969	947	969	0.98
12	18	0.0015	0.081	13.0	3.0	1	23	977	999	977	999	0.96
13	18	2.3e-06	0.00013	21.9	0.5	1	23	1007	1030	1007	1030	0.96
14	18	0.11	5.9	7.2	0.9	2	23	1037	1058	1036	1058	0.95
15	18	0.012	0.67	10.1	2.3	2	23	1067	1088	1066	1088	0.97
16	18	0.0011	0.06	13.4	0.6	1	23	1095	1118	1095	1118	0.94
17	18	3.7e-05	0.002	18.1	0.6	1	23	1124	1146	1124	1146	0.99
18	18	6.7e-05	0.0036	17.3	5.7	1	23	1152	1175	1152	1175	0.98

Sequence Information

Coding Sequence: ATGCTTTGTCGTATGTGTTTGCTAGAGTCAGAGAACACGCTCTGTATTTTCGAACAGGACTCGGTTCGATTCCAAGTGGCACCAACAATAGGTCGGCATTTTTGGTTCGAGCCTAAGAAGGACGATCCTATTTCGATCATGATTTGTATTAGTTGCTGGTCGCGAATTGAGGACTTCCACACGTACTATCTGAGTGTGGAAGAGGCTCAGCGTCTGTTGGCAGAACATACCAGAGTGAAGGAGGAGACGGAACAAATTGAGTTGCTGAAAAGGGAATATGGCGATGAGGATATCGATAAAAAGGACGTTAAGATGATGAGTGAAACAGATAAGCAATTGTTTATTGAGAGGACAACAGACGCGAAGGGTCCTGTTTTTGTAGATGTCGGTGACGAGGATGATGCAGTGGACCCTATTGATAACGAAGGATTCGCGGGGGACGGAACTTTCGGGGAATCAGATGATGATCGGGATGTGGATTACGTTAACGACGAGGACTCTTGTTCTTCTGATGAAGAACCACTGGCAAAGAAGGTCGTTCGAAAAAGCTTGAATTTAGACAACGATGAAAAACCAAGACGAGGACGAAAGAAGGGCAGTAAAAATAAGCCGAAAGTTGAACTACATGGAAGCGACGTCAAAGTTGAAGTTGAATTAGAGATTCCTGAGACAACATTGGATATAAAGACAATTAAAACTGAGAAAGATATGGAGAATTcgataaaaattgaaatattaaacGATAACGATCAACTGGAGAAAGGAGACGAACCACCAAAAAAGAAGCGTGGTAGAAAGAAAAAGTCTGAAATGACCGAGGAGCCTGTGCGTATTGTAAAAAGACCGGGAGAATCTGAATATCGTAAGAAAAATAAGGAGTATGACGATGAGATAGCACAATTTTTGCGACTTAGATGTGAACTCTGCTTGACTGATTGCGATACATTCGCCGACATTAAAAGACATTATCGCACCTCTCATAACAGGAGAGGCTATGTAACTTGTTGCACAACGAGGAAATTTTACAAGCGTGTTTTTCTCTACGAACACATACAAAAGCATAAAAATCCGGACACATTCAAGTGTCAGTTTTGTGAAAAGGTTTATTGCAGTGCGTCAGTGTTGCGAAGCCACCTGTTGACCCATGATGCTTCCTTTGAGAAATTATATCAATGCGATAAATGCCCGCGACGCTTCGCAAAACTTTCGGTCCTGAATCATCACAAAATAATTCACATCCCAAAAGAAGAACATTCATTTTCTTGCGATATTTGTGGCAAATCATTTCCCTCAAAGAACACAATGCAGACCCACAGGAAGTCGGTTCATGAAAAGGCATACTCGAAAATGTGTCATATTTGCGCTAAGGTTATCAACGGCAAAACACTCTTCACAAAACATCAGCTTGAACATATTGGCATTGTCGATCCGAAAATGCAGTGCGAAAAGTGTGGCATGTGGCTTAAGAATGCATTCCGGTTGAAAATTCATACGAAAAAACACCATAGCGAGGAGAATACGGGCGAGCACGTGTGCAACATTTGCGGCAAAGTGTCTACCTCTAGTGTCGGTTTGAAAAGCCATATTCGCTACGTACATGCAGCACAGCGTAAATTCTTATGTAGTGTTTGTGAGAAAGGATTCAAGACGGCTTTGAATTTGAAgGAACACATGACAACACATACAGGTGATATCCTGTATACATGCCCGCATTGCCCGAAAACATTCAATTCGAGTGCAAATATGCATTCGCATAGAAAGAAAATGCATCGACAGGAGTGGGAAGAGAGCAGAAGAAGCCGTGGTCTTCCAGTCAATACAAAGGGGAAAAGAGTTATACAAAATATACAAACTGAGGACAGCACCgaacaagaagaaatacaaaCAATGCCGGTAATGACTGTAATTGAAACGACGTCTTCGGACAATTACAAATTTTTGGCTTCTTCCGATATGAATGGAAGACTGGATAGTTTATTACCTAAAGACGACGATCCAATCTCGAATATTGTCTGCAATTCATGCTGGTGGAAAATAGAGTCCTTTCATATTTATTACCTAAGTATAGAGGAGGCTCATCGTAAACTTTCTGAAAGATTTTCGGTGAAACAGGAGGATTCGTACCACCATCGTCACGCAGATGCCGGGATTCAGGTATACTTCAAGCTGGAGGAGGATAATTCAGTCGAGGACAGCTATGAAAACTGCGTGGAGGGGAGTGAAATTACGGTCATCGAAACGGCGGAAGACATGGCCGGGCAGGACACTACCTTTGACGAGGAAGAAAACAATTTCAATGAGTTGGTGGAGGCGAGCGCCGTTGAAAGTGAACAGGTGGAGGAAGTATTAGAATCATCCAAAGAAGAAGTAAGCATTCAAATTCAAACATGCTCAGAAGAAGCAGCCACACGACGGTCAAAATATTTAGAGGCTCAAAAAAATTTAGAGGAATTTATCAAAATTGAAACGGTGGAAAATGCTTTGGTCAATGACGATGGAGATGGTGATAGTGACGATGCTCCGCTCATAAGACACAAACGGAAACGAAGGAAAACTGGGCATGCCCTGTCGGCATCTGATGAAAATTCTAAGTCTAAAACGTCGAAATCTACTTCAAATGAGTACTTATTGAAGTCGAAAGAAGATGACCTGAAAATCGCCAAACATATGAAGCTGAAATGTGATCTTTGTGAAAGTGATTATCCAACCTTTGCCGAAGTGAAACGACATTATCGGAATGTACATAAGAGGAAAGGATATGTTGTGTGCTGCAATAAGAAATTATATAAAAGGGTGCTTATTTTGGACCACGTGAATAAGCATTTGAATCCGGATTATTTCAAGTGTAACGAATGCAACAAAGTGTTTGCTGATAAGCAATGTTTGAAAAACCATATGATCCGGCATGAGTCAGATGATGCAAAACTGTTCCGGTGCGAGCACTGTCCGCGGCGATTCCCAAAACAATATTTGCTAGATCAACACAAATTCATACATACACCACAAGAAGAGCGCCAGTATTTTTGTGAAGACTGCGGGAAAGCCTTCCCAACAAATAACTTGCTACAAACGCATCGACGATATGTTCACGAAAATGCCTATGGACAAATGTGCCATATATGTGCCAAAGTAATTCGCGGAAAGAGGCTTTTTGCGAAACATCAGCTAGAACACGCGGGTGTAACAGAGCCAAGGGTGCAGTGCGAGATCTGTGGAGCTTGGCTCAAACATCAACATAGTCTGAAAAAACACTTAATGCGCCACGAGGAGGCACAAAATCAACATATTTGTACTATGTGCGGCAAGGTGGCACCATCCAAAGGGGCTTTACGTAGTCATATTCATTATGTGCATGCATCTGCACGTTCATTTAAATGTAGCGTATGTGACAAAGGATTCAAGAAGGCTATTGTTTTGAAGGAACATATGACAACTCACACGGGGGAGGTACTATATACGTGCCCGCATTGTCCGAAAACATTCAATTCACATGCAAATATGCATGCGCATAGGAAAAAGGTACATCGGAAGGAGTGGGAAGAAAGGCGTAAGAATCGTGGTTGCCCTACCGAAAACCTAAACACCGCCAATGATTCTTCAGAAAACGGAAATAATATTAGTGAAATTTGTGAAAATAGCTTAGAAAACTTGCCCGAAAACAGTATAAATGTTGTTTTGTATGAAACGGTTTCGTAG
Protein Sequence: MLCRMCLLESENTLCIFEQDSVRFQVAPTIGRHFWFEPKKDDPISIMICISCWSRIEDFHTYYLSVEEAQRLLAEHTRVKEETEQIELLKREYGDEDIDKKDVKMMSETDKQLFIERTTDAKGPVFVDVGDEDDAVDPIDNEGFAGDGTFGESDDDRDVDYVNDEDSCSSDEEPLAKKVVRKSLNLDNDEKPRRGRKKGSKNKPKVELHGSDVKVEVELEIPETTLDIKTIKTEKDMENSIKIEILNDNDQLEKGDEPPKKKRGRKKKSEMTEEPVRIVKRPGESEYRKKNKEYDDEIAQFLRLRCELCLTDCDTFADIKRHYRTSHNRRGYVTCCTTRKFYKRVFLYEHIQKHKNPDTFKCQFCEKVYCSASVLRSHLLTHDASFEKLYQCDKCPRRFAKLSVLNHHKIIHIPKEEHSFSCDICGKSFPSKNTMQTHRKSVHEKAYSKMCHICAKVINGKTLFTKHQLEHIGIVDPKMQCEKCGMWLKNAFRLKIHTKKHHSEENTGEHVCNICGKVSTSSVGLKSHIRYVHAAQRKFLCSVCEKGFKTALNLKEHMTTHTGDILYTCPHCPKTFNSSANMHSHRKKMHRQEWEESRRSRGLPVNTKGKRVIQNIQTEDSTEQEEIQTMPVMTVIETTSSDNYKFLASSDMNGRLDSLLPKDDDPISNIVCNSCWWKIESFHIYYLSIEEAHRKLSERFSVKQEDSYHHRHADAGIQVYFKLEEDNSVEDSYENCVEGSEITVIETAEDMAGQDTTFDEEENNFNELVEASAVESEQVEEVLESSKEEVSIQIQTCSEEAATRRSKYLEAQKNLEEFIKIETVENALVNDDGDGDSDDAPLIRHKRKRRKTGHALSASDENSKSKTSKSTSNEYLLKSKEDDLKIAKHMKLKCDLCESDYPTFAEVKRHYRNVHKRKGYVVCCNKKLYKRVLILDHVNKHLNPDYFKCNECNKVFADKQCLKNHMIRHESDDAKLFRCEHCPRRFPKQYLLDQHKFIHTPQEERQYFCEDCGKAFPTNNLLQTHRRYVHENAYGQMCHICAKVIRGKRLFAKHQLEHAGVTEPRVQCEICGAWLKHQHSLKKHLMRHEEAQNQHICTMCGKVAPSKGALRSHIHYVHASARSFKCSVCDKGFKKAIVLKEHMTTHTGEVLYTCPHCPKTFNSHANMHAHRKKVHRKEWEERRKNRGCPTENLNTANDSSENGNNISEICENSLENLPENSINVVLYETVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -