Hill006246.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- hang
- Assembly
- GCA_905115235.1
- Location
- NC:110786843-110802535[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0028 0.15 12.2 1.5 2 23 242 264 241 264 0.95 2 21 0.077 4.2 7.6 1.0 2 22 361 381 360 381 0.93 3 21 3.9 2.1e+02 2.3 0.8 3 21 391 409 390 410 0.94 4 21 0.0061 0.33 11.1 1.3 1 23 450 473 450 473 0.91 5 21 4.1 2.2e+02 2.2 2.4 2 23 513 535 512 535 0.88 6 21 0.00021 0.011 15.7 1.5 1 23 572 595 572 595 0.93 7 21 0.00086 0.047 13.8 0.0 1 23 603 626 603 626 0.94 8 21 0.96 52 4.2 3.1 1 23 664 686 664 686 0.98 9 21 4.3e-05 0.0023 17.9 0.2 1 23 736 758 736 758 0.98 10 21 8.8e-05 0.0048 16.9 4.3 2 23 804 826 803 826 0.96 11 21 0.0052 0.29 11.3 1.3 2 23 835 857 834 857 0.95 12 21 0.00044 0.024 14.7 0.2 1 23 870 893 870 893 0.93 13 21 0.00017 0.0092 16.0 1.3 1 23 917 939 917 939 0.99 14 21 0.0032 0.18 12.0 0.9 1 23 947 970 947 970 0.96 15 21 0.0085 0.46 10.7 2.3 3 23 979 999 979 999 0.98 16 21 0.00031 0.017 15.2 0.8 3 23 1068 1088 1066 1088 0.96 17 21 0.00013 0.0069 16.4 0.1 1 23 1123 1145 1123 1145 0.98 18 21 2e-06 0.00011 22.0 0.1 2 23 1171 1193 1171 1193 0.95 19 21 0.013 0.7 10.1 0.6 2 23 1213 1234 1212 1234 0.97 20 21 0.00024 0.013 15.5 0.2 3 23 1247 1267 1247 1267 0.99 21 21 0.00083 0.045 13.8 1.3 1 23 1427 1449 1427 1449 0.97
Sequence Information
- Coding Sequence
- ATGACGGACGAGATAATCGTGCGGGCACGGCAAAATTGCTGCCGCCTATGCTTGGCTCCGGACAGTGAATGTGTTCCAATTCTGACGAGTTTGGCTGCTGATAAGGAACCTCTTTCGTCGAAAATTCAAGCGTGCGTCAACGTGAAGgTTAACCAATCGGATCGCCTTTCTCTGAGAATATGTCATTCGTGCATAAGTTTCCTGAATGCATGGCAAAGCTTCAAAAATCGGTGCTTAGCGGCCCAAATGAAACAACTGAATTGGTTGGAGATGGCTAAGAGTTCAATGCGGCGGCAAATCGGTCAAATGCAACAGCAACAAACATGTTCACTGGCCAATGGTACCGATGTTCGTTCAAATCAAAGTCGAATGCCAGCTAAACCTGCTACTGGTAGACCTATGCCTATTCCAATGATTATTAAAGAAGAGCCCTTAGACGAAGAGGCAGATGCGCAGGAGGAAGCAGCGTTGAGAATGAGCCTGAACCCTGCAGAATTTCTCGAAAGTAATGGCGTTATACCAAAGCAGGAGTTAGAAGATGAAGATGAATTTCTCTTGGAGCCTAGCAAAATAATGAACGACGAAGGACCACAAATACTGACATCACTTGGATTAACTCAAATAAAGAGAGTTAACCCGTATAGTCAATTGAGCATTGATGCTGGCCACACTAAAAGGGATATTGAAAGTCAACAAGAAGCATCGCCTGGTATTCCGGCGACTCAGTGCCGTTTTTGCAATATGTCTTTTTCGTCGGCAACCAATGCCCGGCGTCATGAGCGTAATTTGCATCGAGCGACAGACATGGGAAATGCCGAAACACCGAAATTCTGCATCAAACCAACTGCTCCACGTTCATTGCTGAAACCTCTACATACGTTAAGACCAAATTCGATGCCATCTTCCACGTCGTCTCTATCAGTATTTACGCAACTAAGAGCCGCGCCTCCTCCCGTGACACCAGAGATGATGGGGGTCTATGACTACGATAAACCGGAAAAGTACCGGCATTTATTAACTGATTCTAAATTGTTGTTTATCCGCAAACATGAGGATTTCTTGAAACAGTATCAAACAATGACTTGTACGTGTTGCCCTCAGACATTCCCGTCATACAAAGCTTTCATGGCTCATATGCGaagaaaatacacaaatttGGCGAGAAACTTGTGTTTCAAGTGCCTGAAACAGTTTCAATCGAAGACTCCATTCGTCGCTCATCTGAAGAAGAGGAATTGCATAAATTTGTACAAACTTTATAATGCAGACAATGAAATCCCGAAGACGGGGAATTTGGTAGCATCACCAGAGAAGGTGGGCACGAAAGAGCTGTTGAATAATAAAGTATACGAATGTAAATTGTGTTCAAAAACATTCCGATTGAAGCTAGATTTCCGCAGCCATGTCTACGAAGCTCATGGCGATAGTGTGAGGAAGGATTCCGCTCCTGGAAGATGTGGCTTCTGCAACATGGAGCTCGAGGATCCTACTTTACGTCGCCGCCATTATAACAATATGGAATGTATTGTAATGATACACTGTGGTACCTGCAAAGAGAAGTTTGAATTTCATCAACAATTCATCGATCACGTATATGAGCTGCACTTGCCAAGTCCAGCAAACAATAATGACGTATCCGTGGCGGATACGACCGTGCCCTCTGAGCTTTCGACAAATGTCTCATATTCTGAAACATTCAACTCTCGGCTCCCGCATAGTTGCAATATTTGTGGGCAAACCTACAACAACTACTACAACGTACTTCGTCACATGGAAGGAAAGCATCCCGATCAAGTCCCGAAAAGATATGTATGCGATAAATGCGACGCAGGATTCCCCCGACAGGGTCCGCTGAGGGATCATATGTACGAGGTGCACGGAACAACCCTTCCTAGAGTTCGCCGTGAGATGCTTTCGTGCAGAATGTGCACGGAGCAAATCGATTCGAAGGAAAAGTGGCTGAAGCACCAGACAGAGCAGCATTCTCGGTATACTTGTTGCTTCTGTGCGTTCCAGACGAAGAGCTTGGAAGATTTCAAAGATCACATTGAAACTCATCCGCAACTGGCAGTAAAAAATAACCCTATCCCCACTACAGCAGCACCAAGTTTATTGTCTGTGACGAATGGTGGAAACGAGGGagatgatgaagatgaagatgagAACCtgcaaccaacaaaaaaaattaagctgGAACCTTCAGAGTTCGAATGCCCCGTGTGCCATGCTGGATTCTCCGGTAACGTTGCGCTCTCAAACCACATGCGTTCGCACTACAGCAACGAAGTCGTGAAGTACCAAAGTGTGTCTGCTGTTAAGAATAGTTTGGCAAATCCAACCATGAAAAATACATCAACTCCTATAGTAACGGGAGTCGAGACGGCAATGCCTGAGCAAGTGCGTCGGATTCGTTGCCATTTGTGTTCAAAGCGTTTTACGTCGAAAAAGACGTATCGTAAGCATATGTTGATAGAGCACCAAGTAAAAAACGTAAGTTTTATAAAGTGCTCAATTTGTAAGGCAGAGTTCACGCACGAGAGAGGTTTGCGAGTACACTTGTACAAAACCCATGGAACTATATTGACTAGTGAGAACATAAATGCAACCTATGAATGTGAGATATGCGACGCCGAATTCAAAAGCGAGAAGTCGTTGAACCAACACAAGGGTATGGTGCATAAGAATCGGGATAAAGATACCTCAGTGGAGGCTCACAATCCGCCTGTCCAAAACGGCCCTATCTATTGGTACCAATGCAGCTACTGTCCCGCTCATTTTGAGACAAACAAGAAGCTTGCCATTCACTTGAATTCTCACACGGAGTTCGATGCAAACGATTATTCATGCAAAGATTGTGGTAATGTTTATAATGGACGAAAAAGTCTTTGGGTTCATCGTTACAAGAAACATCGAGAAGTTCCCAATCCAACGGGCTGTCCAATTTGTAAGAAGCTTTTCTTCACGAATAAAATGCTTCAAATCCACATTACACATCACGGGGAAACCGGTGGCCAGATGAGCGATttgcaaaatattgaaaacggAGAAGAGCAGAACAAAGACGTTTATGACAGTTGTAAACAAGGcgcagaaaatgaagaagagaATGATGAAGATTACGAGCAGGAGGATGAGCATGGGATGGAGCAAGATGAAGAACGGGTTCAGGAAGATTTTGAGTTGCTCGCGCCGAAAGTTCATTGCTCAGTTTGTAATGAGGAGTTTACTGATCAAGATTTATTCGACAAACATATGGAAATGCATCAAATCGATTTGTATAGTGACAATCCACTAGCTGCTATGTTTGATACTGGCCCCGATGATCCTAATCAATACTTCATGAATCGAATGAGTGACAACGGTGCTTATACGTGTGATATATGTCCGAAAACATTTCCAGCACTGACGGCTTTGAAAGTACATCGAAACTGGCATTTCAGACAAGATGGTAAACAGatTCCCGCCGACTCGAAAATGAAATCTCTGGCGCAGAAGAAGAAAGCGACAAACGTATGTGAATATTGCGACACAGGATTCTCTAGTGCGAGTAACCTCAGGCGTCACATAATGGAGGTGCACAACCGCGGTCCGCATAACAATTCAAGCCGTGTGAAGAAATTCGTTGACAAATATTTAGAGTGCACAAAGTGTAATATGAAATTCGACGAGAAACCCGAGTGGGTGAAACATAAGATGACACATGCTACTGAAAGTTTTATTTCCCCTTTCGAATGGGGTTGTGAAATTTGCGGTAAGATAGTGTCGAGAAAGGAGAGACTTGTTCAGCACATGAACAGCCACTTGAGGTCGAGAGGGGACGCTGAGGATGGAAATGGGAGTGTTGTAAGCGAAGATCAAGGTAACTCGCAGGACACGGTCTTTTCAAGCAATACTGGACGTCAGAGTGCCGCTGGAAAACCCAGAACAGGTGAAGACGATGAAGCCGAATACGAGAAGGGAGACAATGCAGACGCGGAAGAAACTAGAGATGGATCAATGGAAGAAGCTGACGGTAATCAGGAAAATATCGAAGAACCCGAAGAAAGTATTAACGATGTtcatgaagaagaagatgatagtgatgatgatgatgagaacgGGGATGATGGAGCAGAGGGAGAAGATGGTAACGTTAGAGGAAACCAATTGCAATACGACGAAGACTCCAGTCAACAGTATCAGGAAGTAGATCCAGACCAAGATGATATTCAAGATGACGAGGAGGAAAACGATGAAGAAGAAGGCGAGGAAGAGGAAGATCAAGATAATATGGGCGCGTATTCTTGCGATTTATGTCAAGTGTACTTCGAAACTTCGAAGCAATTACGGCGCCATGTAACGAGCCATTTTCTAAACGGCCCCGGATCAGTGACACTGACTGAGATACCCAAAGAAAAGTCGTACGCTTCCAAGATTCAAATCGGAGACGATGTTACAACTATAACTCCTGTATAA
- Protein Sequence
- MTDEIIVRARQNCCRLCLAPDSECVPILTSLAADKEPLSSKIQACVNVKVNQSDRLSLRICHSCISFLNAWQSFKNRCLAAQMKQLNWLEMAKSSMRRQIGQMQQQQTCSLANGTDVRSNQSRMPAKPATGRPMPIPMIIKEEPLDEEADAQEEAALRMSLNPAEFLESNGVIPKQELEDEDEFLLEPSKIMNDEGPQILTSLGLTQIKRVNPYSQLSIDAGHTKRDIESQQEASPGIPATQCRFCNMSFSSATNARRHERNLHRATDMGNAETPKFCIKPTAPRSLLKPLHTLRPNSMPSSTSSLSVFTQLRAAPPPVTPEMMGVYDYDKPEKYRHLLTDSKLLFIRKHEDFLKQYQTMTCTCCPQTFPSYKAFMAHMRRKYTNLARNLCFKCLKQFQSKTPFVAHLKKRNCINLYKLYNADNEIPKTGNLVASPEKVGTKELLNNKVYECKLCSKTFRLKLDFRSHVYEAHGDSVRKDSAPGRCGFCNMELEDPTLRRRHYNNMECIVMIHCGTCKEKFEFHQQFIDHVYELHLPSPANNNDVSVADTTVPSELSTNVSYSETFNSRLPHSCNICGQTYNNYYNVLRHMEGKHPDQVPKRYVCDKCDAGFPRQGPLRDHMYEVHGTTLPRVRREMLSCRMCTEQIDSKEKWLKHQTEQHSRYTCCFCAFQTKSLEDFKDHIETHPQLAVKNNPIPTTAAPSLLSVTNGGNEGDDEDEDENLQPTKKIKLEPSEFECPVCHAGFSGNVALSNHMRSHYSNEVVKYQSVSAVKNSLANPTMKNTSTPIVTGVETAMPEQVRRIRCHLCSKRFTSKKTYRKHMLIEHQVKNVSFIKCSICKAEFTHERGLRVHLYKTHGTILTSENINATYECEICDAEFKSEKSLNQHKGMVHKNRDKDTSVEAHNPPVQNGPIYWYQCSYCPAHFETNKKLAIHLNSHTEFDANDYSCKDCGNVYNGRKSLWVHRYKKHREVPNPTGCPICKKLFFTNKMLQIHITHHGETGGQMSDLQNIENGEEQNKDVYDSCKQGAENEEENDEDYEQEDEHGMEQDEERVQEDFELLAPKVHCSVCNEEFTDQDLFDKHMEMHQIDLYSDNPLAAMFDTGPDDPNQYFMNRMSDNGAYTCDICPKTFPALTALKVHRNWHFRQDGKQIPADSKMKSLAQKKKATNVCEYCDTGFSSASNLRRHIMEVHNRGPHNNSSRVKKFVDKYLECTKCNMKFDEKPEWVKHKMTHATESFISPFEWGCEICGKIVSRKERLVQHMNSHLRSRGDAEDGNGSVVSEDQGNSQDTVFSSNTGRQSAAGKPRTGEDDEAEYEKGDNADAEETRDGSMEEADGNQENIEEPEESINDVHEEEDDSDDDDENGDDGAEGEDGNVRGNQLQYDEDSSQQYQEVDPDQDDIQDDEEENDEEEGEEEEDQDNMGAYSCDLCQVYFETSKQLRRHVTSHFLNGPGSVTLTEIPKEKSYASKIQIGDDVTTITPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -